Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 9.8e-107 390.2 203 100.0
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 6.8e-100 367.5 203 95.1
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.6e-99 365.5 203 95.1
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 2.2e-90 335.9 207 88.9
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.3e-87 325.9 203 87.2
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 2.1e-69 266.2 205 73.7
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 1.7e-63 246.5 210 66.7
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 3.1e-60 235.7 208 67.3
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.1e-57 227.3 205 62.4
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 2.4e-57 226.1 203 62.6
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 2.4e-57 226.1 205 62.4
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 6.0e-56 221.5 203 62.6
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 7.8e-56 221.1 205 62.0
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 1.3e-55 220.3 203 63.1
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 1.1e-54 217.2 202 60.9
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 1.1e-54 217.2 206 59.7
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 1.5e-54 216.9 205 61.0
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 1.9e-54 216.5 203 62.6
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 2.5e-54 216.1 209 58.9
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 2.5e-54 216.1 203 60.6
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 3.3e-54 215.7 203 62.6
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 2.1e-53 213.0 203 60.6
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 4.8e-53 211.8 203 58.6
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 2.4e-52 209.5 206 58.7
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 1.2e-51 207.2 203 60.1
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 1.5e-51 206.8 203 58.1
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 2.6e-51 206.1 203 59.6
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 7.6e-51 204.5 203 58.1
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 1.7e-50 203.4 210 58.6
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 4.9e-50 201.8 205 60.0
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 8.4e-50 201.1 203 58.6
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 1.1e-49 200.7 203 57.1
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 1.4e-49 200.3 203 59.1
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 4.2e-49 198.7 212 54.2
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 4.2e-49 198.7 203 55.7
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 1.6e-48 196.8 213 54.9
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 2.1e-48 196.4 231 52.8
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 2.1e-48 196.4 204 58.8
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 6.0e-48 194.9 208 55.3
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 7.9e-48 194.5 213 53.5
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 1.7e-47 193.4 203 57.1
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 5.1e-47 191.8 213 55.4
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 1.5e-46 190.3 197 57.9
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 1.5e-46 190.3 204 55.9
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 3.3e-46 189.1 208 54.3
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 3.3e-46 189.1 208 54.3
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 1.6e-45 186.8 207 56.0
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 1.4e-44 183.7 155 63.2
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 3.1e-44 182.6 205 53.2
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 5.3e-44 181.8 214 54.7
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 5.3e-44 181.8 206 53.4
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 6.9e-44 181.4 210 54.3
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 9.0e-44 181.0 152 63.8
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 1.2e-43 180.6 152 62.5
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 2.6e-43 179.5 204 52.5
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 3.4e-43 179.1 216 51.9
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 4.5e-43 178.7 213 51.6
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 4.5e-43 178.7 206 51.9
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 1.3e-42 177.2 212 51.4
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 3.8e-42 175.6 220 48.6
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 4.9e-42 175.3 225 49.3
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 4.9e-42 175.3 212 50.9
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 4.9e-42 175.3 212 50.9
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 1.9e-41 173.3 203 53.7
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 4.2e-41 172.2 204 50.5
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 4.2e-41 172.2 218 50.5
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 4.2e-41 172.2 220 50.0
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 1.2e-40 170.6 196 53.1
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 1.2e-40 170.6 232 47.8
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 2.7e-40 169.5 213 51.2
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 6.0e-40 168.3 167 56.3
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 7.9e-40 167.9 207 50.2
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 7.9e-40 167.9 209 51.2
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 7.9e-40 167.9 165 58.8
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 1.3e-39 167.2 205 50.7
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 1.3e-39 167.2 256 44.9
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 6.7e-39 164.9 187 51.9
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 1.9e-38 163.3 222 49.1
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 3.3e-38 162.5 203 51.2
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 4.3e-38 162.2 205 49.8
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 5.6e-38 161.8 208 48.6
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 9.6e-38 161.0 221 48.0
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 8.1e-37 157.9 212 48.1
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 8.1e-37 157.9 228 46.9
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 1.4e-36 157.1 204 47.5
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 1.1e-33 147.5 232 44.0
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 2.7e-32 142.9 207 45.9
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 2.8e-29 132.9 202 44.6
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 2.0e-27 126.7 212 42.9
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 5.0e-26 122.1 218 40.8
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 4.2e-25 119.0 161 45.3
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 1.2e-24 117.5 153 43.8
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 1.0e-23 114.4 206 40.3
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 1.1e-22 110.9 117 54.7
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 1.3e-21 107.5 122 51.6
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 3.7e-21 105.9 204 37.7
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 1.1e-20 104.4 202 41.1
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 1.4e-20 104.0 140 46.4
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 3.8e-18 95.9 112 51.8
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 2.5e-17 93.2 129 45.0
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 1.1e-12 77.8 99 47.5
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 2.6e-11 73.2 89 47.2
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 5.5e-09 65.5 93 44.1


User provided reference genes

Program Settings