Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G5097 Fragaria x ananassa HOM05D004930 ORTHO05D006531 4.3e-95 351.3 173 100.0
FAN25G1134 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.2e-92 343.2 170 98.2
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 4.3e-63 245.0 171 74.9
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 1.9e-55 219.5 171 67.8
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.8e-40 169.9 94 89.4
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 1.1e-37 160.6 91 85.7
FAN17G1425 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.1e-37 160.6 133 64.7
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 1.4e-37 160.2 91 87.9
FAN17G1951 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.0e-32 144.1 133 58.6
FAN01G0209 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.9e-32 142.1 133 57.9
FAN04G2298 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.1e-31 140.6 74 93.2
FAN13G1313 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.1e-31 140.6 74 93.2
FvH4_5g29680 Fragaria vesca HOM05D004930 ORTHO05D006531 3.3e-31 139.0 74 91.9
FAN18G2930 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.3e-31 139.0 74 91.9
RcHm_v2.0_Chr7g0223001 Rosa chinensis HOM05D004930 ORTHO05D006531 1.4e-29 133.7 74 87.8
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 7.7e-28 127.9 71 88.7
Prupe.1G566300 Prunus persica HOM05D004930 ORTHO05D006531 3.8e-27 125.6 75 82.7
MD15G1421100 Malus domestica HOM05D004930 ORTHO05D006531 6.5e-27 124.8 74 78.4
Sed0026856 Sechium edule HOM05D004930 ORTHO05D006531 2.1e-25 119.8 65 87.7
Cpa.g.sc2.5 Carica papaya HOM05D004930 ORTHO05D006531 6.1e-25 118.2 67 79.1
arahy.Tifrunner.gnm1.ann1.3M9FW6 Arachis hypogaea HOM05D004930 ORTHO05D006531 2.3e-24 116.3 71 77.5
COL.COLO4_17882 Corchorus olitorius HOM05D004930 ORTHO05D006531 2.3e-24 116.3 69 79.7
CiPaw.06G148500 Carya illinoinensis HOM05D004930 ORTHO05D006531 3.0e-24 115.9 66 83.3
arahy.Tifrunner.gnm1.ann1.PLNC5S Arachis hypogaea HOM05D004930 ORTHO05D006531 5.2e-24 115.2 65 83.1
Manes.07G014400 Manihot esculenta HOM05D004930 ORTHO05D006531 6.7e-24 114.8 65 84.6
QL02p098488 Quercus lobata HOM05D004930 ORTHO05D006531 8.8e-24 114.4 66 83.3
Haze_01635 Corylus avellana HOM05D004930 ORTHO05D006531 1.1e-23 114.0 74 75.7
PGR042G0956 Punica granatum HOM05D004930 ORTHO05D006531 1.1e-23 114.0 66 83.3
Thecc.02G040000 Theobroma cacao HOM05D004930 ORTHO05D006531 1.1e-23 114.0 64 84.4
Duzib052G0674 Durio zibethinus HOM05D004930 ORTHO05D006531 1.5e-23 113.6 66 80.3
Duzib248G0906 Durio zibethinus HOM05D004930 ORTHO05D006531 1.5e-23 113.6 64 82.8
Psat1g224280 Pisum sativum HOM05D004930 ORTHO05D006531 1.5e-23 113.6 74 75.7
CANSAT11G0917 Cannabis sativa HOM05D004930 ORTHO05D006531 2.0e-23 113.2 77 74.0
Gohir.A01G001000 Gossypium hirsutum HOM05D004930 ORTHO05D006531 2.0e-23 113.2 70 77.1
Gohir.D01G000700 Gossypium hirsutum HOM05D004930 ORTHO05D006531 2.0e-23 113.2 70 77.1
Gorai.002G001200 Gossypium raimondii HOM05D004930 ORTHO05D006531 2.0e-23 113.2 70 77.1
Lj6g0009653 Lotus japonicus HOM05D004930 ORTHO05D006531 2.0e-23 113.2 80 70.0
Cfa005536 Carpinus fangiana HOM05D004930 ORTHO05D006531 2.6e-23 112.8 74 74.3
Ca_00086_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 3.3e-23 112.5 80 70.0
ClCG05G009760 Citrullus lanatus HOM05D004930 ORTHO05D006531 4.4e-23 112.1 77 75.3
Ciclev10001315m.g Citrus clementina HOM05D004930 ORTHO05D006531 4.4e-23 112.1 71 76.1
TPR.G2103 Trifolium pratense HOM05D004930 ORTHO05D006531 5.7e-23 111.7 80 70.0
Thhalv10007991m.g Eutrema salsugineum HOM05D004930 ORTHO05D006531 9.7e-23 110.9 64 82.8
MELO3C019485.2 Cucumis melo HOM05D004930 ORTHO05D006531 1.7e-22 110.2 65 78.5
CsaV3_3G018910 Cucumis sativus L. HOM05D004930 ORTHO05D006531 1.7e-22 110.2 65 78.5
Atru.chr6.830 Acer truncatum HOM05D004930 ORTHO05D006531 2.8e-22 109.4 70 75.7
Glyma.15G047800 Glycine max HOM05D004930 ORTHO05D006531 2.8e-22 109.4 76 75.0
Sp1g28730 Schrenkiella parvula HOM05D004930 ORTHO05D006531 2.8e-22 109.4 64 79.7
THA.LOC104810264 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 2.8e-22 109.4 64 79.7
A08p08610 Brassica napus HOM05D004930 ORTHO05D006531 3.7e-22 109.0 64 81.2
BraA08t32874Z Brassica rapa HOM05D004930 ORTHO05D006531 3.7e-22 109.0 64 81.2
CARHR032640 Cardamine hirsuta HOM05D004930 ORTHO05D006531 3.7e-22 109.0 64 79.7
Aa31LG6G7800 Aethionema arabicum HOM05D004930 ORTHO05D006531 6.3e-22 108.2 71 70.4
Sabra01G0161800 Salix brachista HOM05D004930 ORTHO05D006531 6.3e-22 108.2 65 76.9
TWI59G0754 Tripterygium wilfordii HOM05D004930 ORTHO05D006531 6.3e-22 108.2 64 79.7
AT1G33270 Arabidopsis thaliana HOM05D004930 ORTHO05D006531 8.2e-22 107.8 64 79.7
BcaB04g17919 Brassica carinata HOM05D004930 ORTHO05D006531 8.2e-22 107.8 64 78.1
BcaC07g37556 Brassica carinata HOM05D004930 ORTHO05D006531 8.2e-22 107.8 64 79.7
BolC8t47898H Brassica oleracea HOM05D004930 ORTHO05D006531 8.2e-22 107.8 64 79.7
AL1G47670 Arabidopsis lyrata HOM05D004930 ORTHO05D006531 1.1e-21 107.5 64 78.1
Carub.0001s3147 Capsella rubella HOM05D004930 ORTHO05D006531 1.1e-21 107.5 64 78.1
Gohir.A08G000149 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.1e-21 107.5 70 72.9
Gohir.D08G010200 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.8e-21 106.7 72 69.4
Gorai.004G003500 Gossypium raimondii HOM05D004930 ORTHO05D006531 1.8e-21 106.7 72 69.4
Medtr2g007650 Medicago truncatula HOM05D004930 ORTHO05D006531 1.8e-21 106.7 73 69.9
Lalb_Chr18g0060861 Lupinus albus HOM05D004930 ORTHO05D006531 2.4e-21 106.3 71 74.6
VMungo0540G0757 Vigna mungo HOM05D004930 ORTHO05D006531 2.4e-21 106.3 75 70.7
Potri.001G209500 Populus trichocarpa HOM05D004930 ORTHO05D006531 5.3e-21 105.1 65 73.8
Sabra03G0012100 Salix brachista HOM05D004930 ORTHO05D006531 7.0e-21 104.8 72 68.1
SGA_v2.0_scaffold145G36067 Striga asiatica HOM05D004930 ORTHO05D006531 7.0e-21 104.8 64 76.6
Phvul.006G213000 Phaseolus vulgaris HOM05D004930 ORTHO05D006531 1.6e-20 103.6 67 74.6
Potri.003G020800 Populus trichocarpa HOM05D004930 ORTHO05D006531 2.0e-20 103.2 72 68.1
AUR62003500 Chenopodium quinoa HOM05D004930 ORTHO05D006531 3.5e-20 102.4 67 73.1
Migut.N01037 Erythranthe guttata HOM05D004930 ORTHO05D006531 5.9e-20 101.7 67 73.1
Nn1g08650 Nelumbo nucifera HOM05D004930 ORTHO05D006531 7.7e-20 101.3 63 74.6
THA.LOC104813074 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 1.0e-19 100.9 64 71.9
Dinv19356 Davidia involucrata HOM05D004930 ORTHO05D006531 1.3e-19 100.5 64 71.9
BcaC08g43878 Brassica carinata HOM05D004930 ORTHO05D006531 1.7e-19 100.1 64 78.1
BolC6t36417H Brassica oleracea HOM05D004930 ORTHO05D006531 1.7e-19 100.1 64 78.1
Ah.03g147430 Amaranthus hybridus HOM05D004930 ORTHO05D006531 3.8e-19 99.0 64 75.0
EL10Ac6g15372 Beta vulgaris HOM05D004930 ORTHO05D006531 3.8e-19 99.0 64 73.4
CSS0021494 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 3.8e-19 99.0 64 73.4
Eucgr.G00613 Eucalyptus grandis HOM05D004930 ORTHO05D006531 3.8e-19 99.0 62 72.6
Glyma.08G184900 Glycine max HOM05D004930 ORTHO05D006531 3.8e-19 99.0 75 69.3
C06p12670 Brassica napus HOM05D004930 ORTHO05D006531 5.0e-19 98.6 64 76.6
Hund04330 Selenicereus undatus HOM05D004930 ORTHO05D006531 6.5e-19 98.2 68 66.2
BcaB07g32965 Brassica carinata HOM05D004930 ORTHO05D006531 8.5e-19 97.8 64 76.6
A09p32980 Brassica napus HOM05D004930 ORTHO05D006531 8.5e-19 97.8 64 76.6
BraA09t38838Z Brassica rapa HOM05D004930 ORTHO05D006531 8.5e-19 97.8 64 76.6
SEGI_13232 Sequoiadendron giganteum HOM05D004930 ORTHO05D006531 1.5e-18 97.1 64 71.9
TAR376G0678 Trochodendron aralioides HOM05D004930 ORTHO05D006531 1.5e-18 97.1 62 72.6
TAR628G0980 Trochodendron aralioides HOM05D004930 ORTHO05D006531 1.5e-18 97.1 74 62.2
vmacro19901 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 1.9e-18 96.7 59 72.9
CAN.G1577.7 Capsicum annuum HOM05D004930 ORTHO05D006531 2.5e-18 96.3 64 71.9
Rhsim05G0119100 Rhododendron simsii HOM05D004930 ORTHO05D006531 2.5e-18 96.3 59 74.6
AUR62017811 Chenopodium quinoa HOM05D004930 ORTHO05D006531 5.5e-18 95.1 61 73.8
SalBow6G0918 Salvia bowleyana HOM05D004930 ORTHO05D006531 7.2e-18 94.7 64 68.8
SalBow6G1869 Salvia bowleyana HOM05D004930 ORTHO05D006531 7.2e-18 94.7 64 68.8
Lj5A251T70 Lonicera japonica HOM05D004930 ORTHO05D006531 9.4e-18 94.4 62 69.4
Nitab4.5_0002245g0180 Nicotiana tabacum HOM05D004930 ORTHO05D006531 1.2e-17 94.0 64 70.3
Nitab4.5_0011195g0040 Nicotiana tabacum HOM05D004930 ORTHO05D006531 1.2e-17 94.0 64 70.3
Solyc01g104310.3 Solanum lycopersicum HOM05D004930 ORTHO05D006531 1.2e-17 94.0 64 70.3
PGSC0003DMG400023754 Solanum tuberosum HOM05D004930 ORTHO05D006531 1.2e-17 94.0 64 70.3
DCAR_001819 Daucus carota HOM05D004930 ORTHO05D006531 1.6e-17 93.6 64 68.8
Sopen01g046750 Solanum pennellii HOM05D004930 ORTHO05D006531 2.7e-17 92.8 64 68.8
Cc02_g22360 Coffea canephora HOM05D004930 ORTHO05D006531 6.1e-17 91.7 62 72.6
Lsat_1_v5_gn_7_77761 Lactuca sativa HOM05D004930 ORTHO05D006531 1.0e-16 90.9 87 57.5
CSS0024235 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 1.4e-16 90.5 59 72.9
CDE05G0822 Ceratophyllum demersum HOM05D004930 ORTHO05D006531 1.8e-16 90.1 62 64.5
GSVIVG01022999001 Vitis vinifera HOM05D004930 ORTHO05D006531 5.2e-16 88.6 75 62.7
Actinidia39050 Actinidia chinensis HOM05D004930 ORTHO05D006531 6.8e-16 88.2 64 64.1
MBI03_g28294_MAGBIO Magnolia biondii HOM05D004930 ORTHO05D006531 1.5e-15 87.0 64 64.1
SMO145G0200 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 1.5e-15 87.0 66 60.6
Sc07g0007240 Simmondsia chinensis HOM05D004930 ORTHO05D006531 1.5e-15 87.0 64 71.9
Lalb_Chr20g0123411 Lupinus albus HOM05D004930 ORTHO05D006531 2.0e-15 86.7 58 70.7
HanXRQChr11g0333531 Helianthus annuus HOM05D004930 ORTHO05D006531 4.4e-15 85.5 50 78.0
HPP92_002187 Vanilla planifolia HOM05D004930 ORTHO05D006531 5.7e-15 85.1 61 60.7
ATR0684G093 Amborella trichopoda HOM05D004930 ORTHO05D006531 9.8e-15 84.3 72 58.3
ECA236G4599 Erigeron canadensis HOM05D004930 ORTHO05D006531 1.3e-14 84.0 50 80.0
AagrBONN_evm.TU.Sc2ySwM_344.3941 Anthoceros agrestis HOM05D004930 ORTHO05D006531 3.7e-14 82.4 64 62.5
Aqoxy5G02422 Aquilegia oxysepala HOM05D004930 ORTHO05D006531 1.4e-13 80.5 52 73.1
Os11g0546300 Oryza sativa ssp. japonica HOM05D004930 ORTHO05D006531 1.8e-13 80.1 58 65.5
Zm00001eb113740 Zea mays HOM05D004930 ORTHO05D006531 3.1e-13 79.3 58 65.5
vmacro01769 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 1.2e-12 77.4 71 60.6
Pp3c11_20720 Physcomitrium patens HOM05D004930 ORTHO05D006531 2.7e-12 76.3 63 60.3
Mapoly0101s0012 Marchantia polymorpha HOM05D004930 ORTHO05D006531 3.5e-12 75.9 56 64.3
PSO170G4712 Papaver somniferum HOM05D004930 ORTHO05D006531 1.8e-08 63.5 53 58.5
AagrBONN_evm.TU.Sc2ySwM_344.3947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.0e-08 62.4 60 53.3


User provided reference genes

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