Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 6.5e-88 327.4 169 100.0
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.2e-87 324.7 169 99.4
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 8.2e-83 310.5 169 96.4
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.2e-81 306.6 171 95.3
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 3.6e-78 295.0 171 92.4
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 2.6e-73 278.9 171 87.1
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 4.4e-44 181.8 158 67.7
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 5.7e-44 181.4 161 66.5
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 2.8e-43 179.1 157 68.2
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 4.1e-42 175.3 164 63.4
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 5.4e-42 174.9 161 65.2
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 7.7e-41 171.0 189 58.7
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 1.3e-40 170.2 170 61.8
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 1.1e-39 167.2 164 61.6
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 2.5e-39 166.0 175 60.0
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 2.1e-38 162.9 182 59.3
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 1.8e-37 159.8 165 58.2
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 6.8e-37 157.9 189 55.0
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 5.7e-36 154.8 158 61.4
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 2.2e-35 152.9 168 57.7
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 6.3e-35 151.4 183 56.3
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 8.3e-35 151.0 171 56.1
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 8.3e-35 151.0 190 54.7
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 1.4e-34 150.2 166 56.6
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 1.4e-34 150.2 186 54.3
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 2.4e-34 149.4 160 58.8
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 5.4e-34 148.3 183 55.7
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 1.2e-33 147.1 156 57.1
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 1.2e-33 147.1 153 59.5
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 3.5e-33 145.6 186 52.7
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 4.5e-33 145.2 162 59.9
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 2.3e-32 142.9 166 58.4
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 2.3e-32 142.9 155 53.5
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 1.1e-31 140.6 171 55.6
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 1.1e-31 140.6 151 58.3
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 7.3e-31 137.9 152 53.9
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 1.0e-29 134.0 160 56.9
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 1.8e-29 133.3 140 59.3
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 1.8e-29 133.3 167 53.9
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 3.1e-29 132.5 184 50.0
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 8.9e-29 131.0 156 53.8
FAN10G0406 Fragaria x ananassa HOM05D007580 ORTHO05D009620 5.8e-28 128.3 71 95.8
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 1.7e-27 126.7 159 49.7
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.7e-27 126.7 153 51.6
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 2.9e-27 125.9 153 51.0
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 6.4e-27 124.8 161 48.4
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 6.4e-27 124.8 170 48.8
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 2.4e-26 122.9 158 48.1
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 4.1e-26 122.1 152 52.0
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 9.2e-26 120.9 146 52.1
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 2.0e-25 119.8 163 50.3
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 4.6e-25 118.6 151 49.7
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 4.6e-25 118.6 157 49.0
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 1.0e-24 117.5 147 56.5
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 3.0e-24 115.9 145 55.9
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 5.0e-24 115.2 157 49.7
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 8.6e-24 114.4 151 51.0
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 2.5e-23 112.8 153 49.7
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 3.3e-23 112.5 155 49.7
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 1.2e-22 110.5 142 52.1
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 1.6e-22 110.2 156 47.4
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 6.2e-22 108.2 155 47.1
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 8.0e-22 107.8 155 47.1
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 3.1e-21 105.9 155 46.5
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 1.5e-20 103.6 154 48.7
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 2.6e-20 102.8 157 47.1
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 4.4e-20 102.1 180 40.6
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 4.4e-20 102.1 181 40.3
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 4.4e-20 102.1 155 45.8
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 1.3e-19 100.5 197 39.1
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 2.2e-19 99.8 175 41.7
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 2.9e-19 99.4 159 47.8
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 1.1e-18 97.4 155 49.0
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 1.4e-18 97.1 167 43.1
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 1.9e-18 96.7 165 45.5
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 2.4e-18 96.3 145 44.8
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 7.0e-18 94.7 157 43.3
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 7.0e-18 94.7 178 41.0
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 2.1e-17 93.2 160 43.8
MBI12_g06406_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 6.0e-17 91.7 160 43.8
MBI12_g45243_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 6.0e-17 91.7 160 43.1
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 7.8e-17 91.3 161 41.6
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 3.9e-16 89.0 145 39.3
Lj1g0023268 Lotus japonicus HOM05D007580 ORTHO05D009620 1.9e-15 86.7 153 45.8
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 1.2e-14 84.0 152 39.5
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 1.2e-14 84.0 102 52.9
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 1.6e-14 83.6 167 36.5
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 2.1e-14 83.2 153 41.8
Ah.05g176020 Amaranthus hybridus HOM05D007580 ORTHO05D009620 1.4e-13 80.5 152 42.8
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 1.5e-12 77.0 168 38.7
SalBow3G0911 Salvia bowleyana HOM05D007580 ORTHO05D009620 2.0e-12 76.6 180 35.6
Dinv32421 Davidia involucrata HOM05D007580 ORTHO05D009620 3.5e-09 65.9 56 62.5
vmacro20972 Vaccinium macrocarpon HOM05D007580 ORTHO05D009620 7.3e-07 58.2 103 43.7


User provided reference genes

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