Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G5044 Fragaria x ananassa HOM05D006782 ORTHO05D011275 4.8e-94 347.8 177 100.0
FAN06G4068 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.8e-49 199.1 123 89.4
FAN19G0520 Fragaria x ananassa HOM05D006782 ORTHO05D011275 7.3e-42 174.5 122 80.3
FAN12G1707 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.4e-40 170.2 123 77.2
FAN08G0293 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.1e-37 160.6 99 84.8
FAN08G0921 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.1e-37 160.6 99 84.8
FAN19G2580 Fragaria x ananassa HOM05D006782 ORTHO05D207724 1.1e-37 160.6 99 84.8
FAN13G2828 Fragaria x ananassa HOM05D006782 ORTHO05D204244 2.4e-37 159.5 97 85.6
FAN12G3887 Fragaria x ananassa HOM05D006782 ORTHO05D203567 5.4e-37 158.3 99 83.8
FAN10G3762 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.2e-36 157.1 99 82.8
FAN06G2652 Fragaria x ananassa HOM05D006782 ORTHO05D032388 1.6e-36 156.8 129 67.4
FAN11G3638 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.7e-35 153.3 123 70.7
FAN14G5237 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.3e-35 152.9 93 88.2
FAN03G3266 Fragaria x ananassa HOM05D006782 ORTHO05D011275 3.9e-35 152.1 113 75.2
FAN10G1058 Fragaria x ananassa HOM05D006782 ORTHO05D011275 3.9e-35 152.1 93 86.0
FAN09G3720 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.5e-34 150.2 93 86.0
FAN16G2026 Fragaria x ananassa HOM05D006782 ORTHO05D205423 1.5e-34 150.2 95 84.2
FAN02G1533 Fragaria x ananassa HOM05D006782 ORTHO05D202813 2.5e-34 149.4 93 86.0
FAN18G3333 Fragaria x ananassa HOM05D006782 ORTHO05D201160 2.5e-34 149.4 99 79.8
FAN26G2872 Fragaria x ananassa HOM05D006782 ORTHO05D208352 3.3e-34 149.1 93 86.0
FAN02G2972 Fragaria x ananassa HOM05D006782 ORTHO05D207747 1.6e-33 146.7 99 78.8
FAN21G2650 Fragaria x ananassa HOM05D006782 ORTHO05D202800 1.6e-33 146.7 93 84.9
FAN22G1259 Fragaria x ananassa HOM05D006782 ORTHO05D209502 2.1e-33 146.4 91 85.7
FAN22G2115 Fragaria x ananassa HOM05D006782 ORTHO05D201415 2.1e-33 146.4 91 85.7
FAN17G1691 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.8e-32 143.3 107 74.8
FAN13G1891 Fragaria x ananassa HOM05D006782 ORTHO05D009662 2.4e-32 142.9 93 82.8
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 4.0e-32 142.1 100 77.0
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 5.3e-32 141.7 99 78.8
FAN18G0670 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.2e-31 140.6 93 81.7
FAN01G3131 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.5e-31 140.2 100 76.0
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 2.0e-31 139.8 99 76.8
FAN18G2750 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.6e-31 139.4 99 80.8
FAN11G2061 Fragaria x ananassa HOM05D006782 ORTHO05D204056 4.5e-31 138.7 91 82.4
FAN24G1064 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.3e-30 137.1 114 71.1
FAN07G0282 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.7e-30 136.7 109 75.2
FAN06G0350 Fragaria x ananassa HOM05D006782 ORTHO05D011275 4.9e-30 135.2 120 69.2
FAN25G1405 Fragaria x ananassa HOM05D006782 ORTHO05D011275 4.9e-30 135.2 120 69.2
FAN11G0567 Fragaria x ananassa HOM05D006782 ORTHO05D203986 1.9e-29 133.3 84 84.5
FAN09G0574 Fragaria x ananassa HOM05D006782 ORTHO05D011275 7.1e-29 131.3 98 76.5
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 9.3e-29 131.0 101 75.2
FAN11G0001 Fragaria x ananassa HOM05D000008 ORTHO05D000005 9.3e-29 131.0 107 73.8
FAN14G1719 Fragaria x ananassa HOM05D006782 ORTHO05D011275 9.3e-29 131.0 98 77.6
FAN14G2649 Fragaria x ananassa HOM05D006782 ORTHO05D011275 9.3e-29 131.0 106 75.5
FAN15G2232 Fragaria x ananassa HOM05D006782 ORTHO05D206330 9.3e-29 131.0 84 83.3
FAN14G3775 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.7e-28 129.4 98 74.5
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 4.6e-28 128.6 93 78.5
FvH4_5g19441 Fragaria vesca HOM05D006782 ORTHO05D011275 1.3e-27 127.1 101 77.2
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.8e-27 126.7 107 73.8
FAN06G2964 Fragaria x ananassa HOM05D000020 ORTHO05D007189 6.7e-27 124.8 99 76.8
FAN28G0431 Fragaria x ananassa HOM05D006782 ORTHO05D011275 6.7e-27 124.8 99 72.7
FvH4_7g23880 Fragaria vesca HOM05D000020 ORTHO05D007189 8.7e-27 124.4 107 72.9
FAN28G1305 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.5e-26 122.9 98 73.5
FvH4_6g34462 Fragaria vesca HOM05D006782 ORTHO05D011275 1.6e-25 120.2 107 71.0
FAN12G1891 Fragaria x ananassa HOM05D006782 ORTHO05D207534 2.8e-25 119.4 67 91.0
FAN28G0105 Fragaria x ananassa HOM05D006782 ORTHO05D001690 6.2e-25 118.2 104 68.3
FAN23G1515 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.4e-24 116.3 106 70.8
FAN17G1596 Fragaria x ananassa HOM05D006782 ORTHO05D011275 8.4e-22 107.8 73 76.7
FAN03G1342 Fragaria x ananassa HOM05D000020 ORTHO05D007189 4.2e-21 105.5 71 83.1
FAN14G1694 Fragaria x ananassa HOM05D006782 ORTHO05D204977 3.3e-18 95.9 129 55.8
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.8e-17 92.0 98 63.3
MD07G1213000 Malus domestica HOM05D000020 ORTHO05D007189 5.3e-16 88.6 96 56.2
FAN18G0595 Fragaria x ananassa HOM05D006782 ORTHO05D011275 6.9e-16 88.2 89 62.9
MD01G1145800 Malus domestica HOM05D000020 ORTHO05D007189 3.4e-15 85.9 100 55.0
FvH4_4g06881 Fragaria vesca HOM05D006782 ORTHO05D011275 1.0e-14 84.3 91 62.6
Prupe.2G245200 Prunus persica HOM05D000020 ORTHO05D007189 1.1e-13 80.9 103 51.5
FAN11G1676 Fragaria x ananassa HOM05D010664 ORTHO05D210082 4.6e-12 75.5 56 75.0
FAN18G1219 Fragaria x ananassa HOM05D010664 ORTHO05D206657 6.1e-12 75.1 70 62.9
FAN26G0390 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.3e-11 73.9 54 77.8
RcHm_v2.0_Chr1g0369251 Rosa chinensis HOM05D000020 ORTHO05D007189 2.5e-10 69.7 56 71.4
CANSAT56G3422 Cannabis sativa HOM05D000020 ORTHO05D007189 4.3e-10 68.9 98 48.0
FAN26G0420 Fragaria x ananassa HOM05D006782 ORTHO05D035260 9.7e-10 67.8 57 70.2
FAN28G1242 Fragaria x ananassa HOM05D006782 ORTHO05D035260 9.7e-10 67.8 57 70.2
FAN17G2023 Fragaria x ananassa HOM05D011019 ORTHO05D200767 2.2e-09 66.6 41 85.4
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 3.7e-09 65.9 39 87.2
ClCG07G003890 Citrullus lanatus HOM05D000020 ORTHO05D007189 1.4e-08 63.9 147 33.3
Medtr5g081720 Medicago truncatula HOM05D000020 ORTHO05D007189 2.4e-08 63.2 97 43.3
CsaV3_5G008860 Cucumis sativus L. HOM05D000020 ORTHO05D007189 3.1e-08 62.8 90 46.7
Actinidia29672 Actinidia chinensis HOM05D000020 ORTHO05D007189 1.5e-07 60.5 84 45.2
TWI09G0809 Tripterygium wilfordii HOM05D000020 ORTHO05D007189 2.6e-07 59.7 94 42.6
HanXRQChr09g0246881 Helianthus annuus HOM05D000020 ORTHO05D007189 4.5e-07 58.9 87 40.2
Lalb_Chr04g0250801 Lupinus albus HOM05D000020 ORTHO05D007189 4.5e-07 58.9 83 44.6
PGSC0003DMG400027385 Solanum tuberosum HOM05D000020 ORTHO05D007189 7.7e-07 58.2 90 47.8
PGSC0003DMG400031040 Solanum tuberosum HOM05D000020 ORTHO05D007189 7.7e-07 58.2 90 47.8
AUR62022832 Chenopodium quinoa HOM05D000020 ORTHO05D007189 1.3e-06 57.4 94 47.9
Lsat_1_v5_gn_9_63241 Lactuca sativa HOM05D000020 ORTHO05D007189 1.3e-06 57.4 84 44.0
Lsat_1_v5_gn_2_120421 Lactuca sativa HOM05D000020 ORTHO05D007189 1.7e-06 57.0 87 44.8
FvH4_6g34463 Fragaria vesca HOM05D006782 ORTHO05D035260 2.2e-06 56.6 45 73.3
Ciclev10033928m.g Citrus clementina HOM05D000020 ORTHO05D007189 2.9e-06 56.2 95 46.3
AT3G55780 Arabidopsis thaliana HOM05D000020 ORTHO05D007189 3.8e-06 55.8 83 38.6
Manes.07G124600 Manihot esculenta HOM05D000020 ORTHO05D007189 3.8e-06 55.8 92 38.0
AL5G37060 Arabidopsis lyrata HOM05D000020 ORTHO05D007189 5.0e-06 55.5 83 38.6
Lalb_Chr10g0104971 Lupinus albus HOM05D000020 ORTHO05D007189 6.5e-06 55.1 49 51.0
AUR62012199 Chenopodium quinoa HOM05D000020 ORTHO05D007189 8.5e-06 54.7 94 42.6


User provided reference genes

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