Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G4791 Fragaria x ananassa HOM05D004242 ORTHO05D004349 1.0e-191 673.7 473 100.0
FvH4_7g17260 Fragaria vesca HOM05D004242 ORTHO05D004349 1.9e-190 669.5 473 99.4
FAN06G2582 Fragaria x ananassa HOM05D004242 ORTHO05D004349 2.9e-186 655.6 473 97.9
FAN03G1939 Fragaria x ananassa HOM05D004242 ORTHO05D004349 6.5e-170 601.3 489 85.9
FAN10G0542 Fragaria x ananassa HOM05D004242 ORTHO05D004349 4.5e-163 578.6 488 81.6
FAN01G2496 Fragaria x ananassa HOM05D004242 ORTHO05D004349 1.0e-159 567.4 489 84.9
FAN10G1700 Fragaria x ananassa HOM05D004242 ORTHO05D004349 3.0e-159 565.8 488 80.7
FAN17G2081 Fragaria x ananassa HOM05D004242 ORTHO05D004349 2.0e-139 500.0 488 74.0
FAN22G2040 Fragaria x ananassa HOM05D004242 ORTHO05D004349 2.6e-134 483.0 379 84.7
FAN12G0333 Fragaria x ananassa HOM05D004242 ORTHO05D004349 3.4e-126 456.1 493 74.8
FvH4_4g01200 Fragaria vesca HOM05D004242 ORTHO05D004349 6.4e-125 451.8 495 72.9
RcHm_v2.0_Chr3g0484701 Rosa chinensis HOM05D004242 ORTHO05D004349 1.3e-106 391.0 318 72.3
RcHm_v2.0_Chr1g0360631 Rosa chinensis HOM05D004242 ORTHO05D004349 2.3e-106 390.2 540 64.3
Ciclev10019915m.g Citrus clementina HOM05D004242 ORTHO05D004349 8.2e-40 169.1 279 44.1
Prupe.2G193900 Prunus persica HOM05D004242 ORTHO05D004349 8.2e-40 169.1 332 47.6
Sabra14G0075500 Salix brachista HOM05D004242 ORTHO05D004349 1.2e-38 165.2 265 46.8
Gohir.D11G103800 Gossypium hirsutum HOM05D004242 ORTHO05D004349 1.6e-38 164.9 240 47.5
Gorai.007G111100 Gossypium raimondii HOM05D004242 ORTHO05D004349 1.6e-38 164.9 240 47.5
VMungo0540G1056 Vigna mungo HOM05D004242 ORTHO05D004349 1.6e-38 164.9 326 39.6
Thecc.01G336900 Theobroma cacao HOM05D004242 ORTHO05D004349 1.7e-37 161.4 255 45.9
Duzib138G0794 Durio zibethinus HOM05D004242 ORTHO05D004349 2.2e-37 161.0 274 45.3
Lj1g0015234 Lotus japonicus HOM05D004242 ORTHO05D004349 2.2e-37 161.0 312 40.7
Gohir.A11G099300 Gossypium hirsutum HOM05D004242 ORTHO05D004349 3.8e-37 160.2 240 46.7
arahy.Tifrunner.gnm1.ann1.16GZH2 Arachis hypogaea HOM05D004242 ORTHO05D004349 1.8e-34 151.4 222 47.3
Duzib133G0806 Durio zibethinus HOM05D004242 ORTHO05D004349 6.7e-34 149.4 221 47.1
Manes.01G267100 Manihot esculenta HOM05D004242 ORTHO05D004349 8.8e-34 149.1 274 44.9
arahy.Tifrunner.gnm1.ann1.1EJ222 Arachis hypogaea HOM05D004242 ORTHO05D004349 7.5e-33 146.0 257 44.4
Phvul.006G115800 Phaseolus vulgaris HOM05D004242 ORTHO05D004349 1.7e-32 144.8 328 37.8
QL08p046281 Quercus lobata HOM05D004242 ORTHO05D004349 2.2e-32 144.4 258 46.5
Ca_09531_v3 Cicer arietinum L. HOM05D004242 ORTHO05D004349 1.1e-31 142.1 254 39.8
TPR.G4684 Trifolium pratense HOM05D004242 ORTHO05D004349 3.1e-31 140.6 270 40.7
Glyma.19G258400 Glycine max HOM05D004242 ORTHO05D004349 7.0e-31 139.4 254 39.0
Medtr7g117980 Medicago truncatula HOM05D004242 ORTHO05D004349 7.0e-31 139.4 331 36.0
Actinidia25370 Actinidia chinensis HOM05D004242 ORTHO05D004349 3.5e-30 137.1 269 41.3
Potri.014G102466 Populus trichocarpa HOM05D004242 ORTHO05D004349 5.9e-30 136.3 263 43.7
Cpa.g.sc144.11 Carica papaya HOM05D004242 ORTHO05D004349 1.7e-29 134.8 317 37.9
Cfa003761 Carpinus fangiana HOM05D004242 ORTHO05D004349 2.2e-29 134.4 229 47.6
Gohir.A07G135500 Gossypium hirsutum HOM05D004242 ORTHO05D004349 2.2e-29 134.4 236 43.6
Gohir.D07G140400 Gossypium hirsutum HOM05D004242 ORTHO05D004349 5.0e-29 133.3 244 42.6
Gorai.001G152400 Gossypium raimondii HOM05D004242 ORTHO05D004349 1.1e-28 132.1 244 42.2
Potri.002G175400 Populus trichocarpa HOM05D004242 ORTHO05D004349 1.1e-28 132.1 252 44.4
Rhsim07G0001600 Rhododendron simsii HOM05D004242 ORTHO05D004349 5.5e-28 129.8 310 41.3
Manes.05G019100 Manihot esculenta HOM05D004242 ORTHO05D004349 7.2e-28 129.4 270 41.1
Lalb_Chr15g0076401 Lupinus albus HOM05D004242 ORTHO05D004349 1.6e-27 128.3 313 38.0
Glyma.03G259500 Glycine max HOM05D004242 ORTHO05D004349 3.6e-27 127.1 287 37.3
Haze_15699 Corylus avellana HOM05D004242 ORTHO05D004349 6.1e-27 126.3 488 42.6
CiPaw.02G043200 Carya illinoinensis HOM05D004242 ORTHO05D004349 2.3e-26 124.4 475 37.3
Peaxi162Scf00014g00294 Petunia axillaris HOM05D004242 ORTHO05D004349 5.2e-26 123.2 323 35.9
PGSC0003DMG400007374 Solanum tuberosum HOM05D004242 ORTHO05D004349 1.2e-25 122.1 312 36.2
TWI14G0118 Tripterygium wilfordii HOM05D004242 ORTHO05D004349 3.4e-25 120.6 207 41.1
Solyc08g067370.1 Solanum lycopersicum HOM05D004242 ORTHO05D004349 5.7e-25 119.8 312 37.5
SGA_v2.0_scaffold98G29435 Striga asiatica HOM05D004242 ORTHO05D004349 5.7e-25 119.8 236 40.3
TWI59G0661 Tripterygium wilfordii HOM05D004242 ORTHO05D004349 7.5e-25 119.4 207 42.0
Eucgr.D02643 Eucalyptus grandis HOM05D004242 ORTHO05D004349 9.8e-25 119.0 205 42.9
TAR339G0002 Trochodendron aralioides HOM05D004242 ORTHO05D004349 9.8e-25 119.0 319 36.1
Atru.chr5.733 Acer truncatum HOM05D004242 ORTHO05D004349 4.8e-24 116.7 282 37.9
Ah.05g179200 Amaranthus hybridus HOM05D004242 ORTHO05D004349 6.3e-24 116.3 259 38.2
CAN.G211.7 Capsicum annuum HOM05D004242 ORTHO05D004349 1.1e-23 115.5 318 33.6
CiPaw.02G042800 Carya illinoinensis HOM05D004242 ORTHO05D004349 3.1e-23 114.0 301 35.9
Oeu004972.1 Olea europaea HOM05D004242 ORTHO05D004349 1.2e-22 112.1 266 37.6
Sopen08g021310 Solanum pennellii HOM05D004242 ORTHO05D004349 3.5e-22 110.5 261 37.9
Lj9P602T20 Lonicera japonica HOM05D004242 ORTHO05D004349 4.5e-22 110.2 255 38.0
Nitab4.5_0000508g0190 Nicotiana tabacum HOM05D004242 ORTHO05D004349 1.3e-21 108.6 313 33.2
CSS0005133 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 1.7e-21 108.2 307 37.8
CSS0009998 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 1.7e-21 108.2 307 37.8
Psat3g001320 Pisum sativum HOM05D004242 ORTHO05D004349 1.7e-21 108.2 337 35.9
AUR62004535 Chenopodium quinoa HOM05D004242 ORTHO05D004349 3.8e-21 107.1 286 35.3
MSTRG.28279 Avicennia marina HOM05D004242 ORTHO05D004349 8.6e-21 105.9 238 39.1
PGR031G2923 Punica granatum HOM05D004242 ORTHO05D004349 8.6e-21 105.9 188 39.9
THA.LOC104817612 Tarenaya hassleriana HOM05D004242 ORTHO05D004349 8.6e-21 105.9 255 37.6
EL10Ac1g00218 Beta vulgaris HOM05D004242 ORTHO05D004349 1.9e-20 104.8 207 39.6
DCAR_002987 Daucus carota HOM05D004242 ORTHO05D004349 5.5e-20 103.2 239 39.7
CSS0040523 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 7.2e-20 102.8 221 36.2
Hma1.2p1_0309F.1_g120440 Hydrangea macrophylla HOM05D004242 ORTHO05D004349 2.8e-19 100.9 226 36.3
Lalb_Chr04g0261391 Lupinus albus HOM05D004242 ORTHO05D004349 2.8e-19 100.9 136 41.9
Nitab4.5_0005697g0010 Nicotiana tabacum HOM05D004242 ORTHO05D004349 4.7e-19 100.1 311 32.5
GSVIVG01027399001 Vitis vinifera HOM05D004242 ORTHO05D004349 6.1e-19 99.8 239 39.3
ClCG06G002780 Citrullus lanatus HOM05D004242 ORTHO05D004349 2.3e-18 97.8 314 30.9
BraA05t19116Z Brassica rapa HOM05D004242 ORTHO05D004349 4.0e-18 97.1 259 34.7
Oeu042952.1 Olea europaea HOM05D004242 ORTHO05D004349 1.5e-17 95.1 322 33.5
AUR62022719 Chenopodium quinoa HOM05D004242 ORTHO05D004349 2.0e-17 94.7 285 33.3
Lsat_1_v5_gn_3_140940 Lactuca sativa HOM05D004242 ORTHO05D004349 2.0e-17 94.7 222 37.4
Lsat_1_v5_gn_8_20301 Lactuca sativa HOM05D004242 ORTHO05D004349 3.4e-17 94.0 246 36.2
CsaV3_6G008950 Cucumis sativus L. HOM05D004242 ORTHO05D004349 4.4e-17 93.6 263 35.4
Sed0017381 Sechium edule HOM05D004242 ORTHO05D004349 4.4e-17 93.6 292 34.9
PSO761G0055 Papaver somniferum HOM05D004242 ORTHO05D004349 2.2e-16 91.3 238 34.9
BcaC02g12660 Brassica carinata HOM05D004242 ORTHO05D004349 2.8e-16 90.9 274 32.5
C04p01320 Brassica napus HOM05D004242 ORTHO05D004349 2.8e-16 90.9 274 32.5
MBI13_g41464_MAGBIO Magnolia biondii HOM05D004242 ORTHO05D004349 2.8e-16 90.9 228 36.8
C04p72290 Brassica napus HOM05D004242 ORTHO05D004349 3.7e-16 90.5 247 36.0
BolC4t21785H Brassica oleracea HOM05D004242 ORTHO05D004349 3.7e-16 90.5 274 32.5
BolC4t28717H Brassica oleracea HOM05D004242 ORTHO05D004349 3.7e-16 90.5 247 36.0
BcaC02g07046 Brassica carinata HOM05D004242 ORTHO05D004349 4.9e-16 90.1 166 38.6
PSO210G2709 Papaver somniferum HOM05D004242 ORTHO05D004349 6.3e-16 89.7 238 34.5
AT2G46630 Arabidopsis thaliana HOM05D004242 ORTHO05D004349 8.3e-16 89.4 241 38.2
MSTRG.20915 Avicennia marina HOM05D004242 ORTHO05D004349 8.3e-16 89.4 249 36.5
AL4G46060 Arabidopsis lyrata HOM05D004242 ORTHO05D004349 1.1e-15 89.0 238 33.2
CiPaw.02G043100 Carya illinoinensis HOM05D004242 ORTHO05D004349 1.4e-15 88.6 299 32.8
Nn4g22396 Nelumbo nucifera HOM05D004242 ORTHO05D004349 3.1e-15 87.4 268 35.4
BcaC02g12659 Brassica carinata HOM05D004242 ORTHO05D004349 4.1e-15 87.0 258 34.5
Hma1.2p1_0180F.1_g079790 Hydrangea macrophylla HOM05D004242 ORTHO05D004349 4.1e-15 87.0 255 34.5
Sed0006480 Sechium edule HOM05D004242 ORTHO05D004349 5.4e-15 86.7 297 34.3
unitig_8.g4995 Utricularia gibba HOM05D004242 ORTHO05D004349 5.4e-15 86.7 266 36.1
A05p01160 Brassica napus HOM05D004242 ORTHO05D004349 9.2e-15 85.9 260 31.5
Carub.0004s2934 Capsella rubella HOM05D004242 ORTHO05D004349 3.5e-14 84.0 230 33.5
CARHR141970 Cardamine hirsuta HOM05D004242 ORTHO05D004349 3.5e-14 84.0 249 32.9
BraA04t18910Z Brassica rapa HOM05D004242 ORTHO05D004349 7.8e-14 82.8 247 34.0
CiPaw.02G043000 Carya illinoinensis HOM05D004242 ORTHO05D004349 7.8e-14 82.8 119 45.4
CsaV3_3G007800 Cucumis sativus L. HOM05D004242 ORTHO05D004349 1.0e-13 82.4 251 33.5
A04p34530 Brassica napus HOM05D004242 ORTHO05D004349 1.3e-13 82.0 269 33.1
Sp4g28680 Schrenkiella parvula HOM05D004242 ORTHO05D004349 1.3e-13 82.0 265 33.6
arahy.Tifrunner.gnm1.ann1.6W400J Arachis hypogaea HOM05D004242 ORTHO05D004349 1.7e-13 81.6 167 36.5
Aa31LG1G28030 Aethionema arabicum HOM05D004242 ORTHO05D004349 2.3e-13 81.3 306 31.7
Thhalv10001731m.g Eutrema salsugineum HOM05D004242 ORTHO05D004349 2.3e-13 81.3 265 33.2
Sp5g01480 Schrenkiella parvula HOM05D004242 ORTHO05D004349 2.3e-13 81.3 264 31.8
Dinv32623 Davidia involucrata HOM05D004242 ORTHO05D004349 2.9e-13 80.9 128 39.1
Thhalv10006210m.g Eutrema salsugineum HOM05D004242 ORTHO05D004349 5.0e-13 80.1 273 31.1
ClCG05G000600 Citrullus lanatus HOM05D004242 ORTHO05D004349 1.1e-12 79.0 216 31.0
BcaC07g42602 Brassica carinata HOM05D004242 ORTHO05D004349 1.9e-12 78.2 142 39.4
BraA09t40807Z Brassica rapa HOM05D004242 ORTHO05D004349 1.9e-12 78.2 253 32.0
A09p53910 Brassica napus HOM05D004242 ORTHO05D004349 4.3e-12 77.0 264 31.8
arahy.Tifrunner.gnm1.ann1.YBIH8U Arachis hypogaea HOM05D004242 ORTHO05D004349 5.6e-12 76.6 167 34.7
Sed0022787 Sechium edule HOM05D004242 ORTHO05D004349 7.3e-12 76.3 247 32.8
MELO3C005996.2 Cucumis melo HOM05D004242 ORTHO05D004349 3.6e-11 73.9 321 28.7
MELO3C022249.2 Cucumis melo HOM05D004242 ORTHO05D004349 3.6e-11 73.9 262 32.1
Sc01g0002380 Simmondsia chinensis HOM05D004242 ORTHO05D004349 3.1e-10 70.9 248 31.5
C08p36720 Brassica napus HOM05D004242 ORTHO05D004349 4.0e-10 70.5 265 30.9
BolC8t51254H Brassica oleracea HOM05D004242 ORTHO05D004349 4.0e-10 70.5 265 30.9
Carub.0005s2862 Capsella rubella HOM05D004242 ORTHO05D004349 4.0e-10 70.5 201 34.3
MELO3C005997.2 Cucumis melo HOM05D004242 ORTHO05D004349 5.2e-10 70.1 302 28.8
Sed0012028 Sechium edule HOM05D004242 ORTHO05D004349 6.8e-10 69.7 223 30.9
SEGI_20460 Sequoiadendron giganteum HOM05D004242 ORTHO05D004349 6.8e-10 69.7 140 35.7
Medtr8g027290 Medicago truncatula HOM05D004242 ORTHO05D004349 8.9e-10 69.3 160 35.0
Lj3g0014324 Lotus japonicus HOM05D004242 ORTHO05D004349 1.2e-09 68.9 296 31.4
ECA236G3302 Erigeron canadensis HOM05D004242 ORTHO05D004349 1.5e-09 68.6 231 35.1
Dinv34239 Davidia involucrata HOM05D004242 ORTHO05D004349 5.8e-09 66.6 117 41.9
CsaV3_3G007810 Cucumis sativus L. HOM05D030996 ORTHO05D004349 3.7e-08 63.9 300 27.3
ATR0568G158 Amborella trichopoda HOM05D006278 ORTHO05D007526 4.9e-08 63.5 131 35.9
Dinv18906 Davidia involucrata HOM05D004242 ORTHO05D004349 8.3e-08 62.8 111 42.3
Lalb_Chr10g0100731 Lupinus albus HOM05D004242 ORTHO05D004349 8.3e-08 62.8 138 32.6
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 8.3e-08 62.8 132 35.6
CsaV3_3G007790 Cucumis sativus L. HOM05D004242 ORTHO05D004349 1.1e-07 62.4 272 29.0
Glyma.07G052632 Glycine max HOM05D004242 ORTHO05D004349 1.1e-07 62.4 288 26.0
CDE02G1230 Ceratophyllum demersum HOM05D004242 ORTHO05D004349 4.1e-07 60.5 248 31.9
Lj9C255T10 Lonicera japonica HOM05D012621 ORTHO05D004349 4.1e-07 60.5 137 35.0
VMungo0331G0257 Vigna mungo HOM05D004242 ORTHO05D004349 9.2e-07 59.3 254 28.3
GSVIVG01027401001 Vitis vinifera HOM05D004242 ORTHO05D004349 9.2e-07 59.3 288 29.5
Lj8P558T21 Lonicera japonica HOM05D012621 ORTHO05D004349 1.2e-06 58.9 89 46.1
Lj9C256T7 Lonicera japonica HOM05D012621 ORTHO05D004349 1.6e-06 58.5 129 36.4
TAR381G0716 Trochodendron aralioides HOM05D006278 ORTHO05D007526 2.0e-06 58.2 133 35.3
Lj8P558T23 Lonicera japonica HOM05D012621 ORTHO05D004349 4.6e-06 57.0 89 44.9
Sed0025990 Sechium edule HOM05D004242 ORTHO05D004349 4.6e-06 57.0 298 28.2
TAR245G0008 Trochodendron aralioides HOM05D006278 ORTHO05D007526 4.6e-06 57.0 133 34.6
Lj8A559T40 Lonicera japonica HOM05D012621 ORTHO05D004349 6.0e-06 56.6 123 38.2
SEGI_05135 Sequoiadendron giganteum HOM05D004242 ORTHO05D004349 6.0e-06 56.6 125 32.8
HPP92_023037 Vanilla planifolia HOM05D004242 ORTHO05D004349 6.0e-06 56.6 159 34.0
Lalb_Chr04g0261381 Lupinus albus HOM05D004242 ORTHO05D004349 7.8e-06 56.2 129 41.9
Sc23g0001950 Simmondsia chinensis HOM05D004242 ORTHO05D004349 7.8e-06 56.2 165 35.8


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