Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G4725 Fragaria x ananassa HOM05D000009 ORTHO05D003343 1.3e-25 119.0 65 100.0
FAN10G3010 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.1e-22 107.8 64 92.2
FAN01G1103 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.2e-21 105.9 64 90.6
FAN01G2338 Fragaria x ananassa HOM05D000009 ORTHO05D000008 4.5e-13 77.4 64 68.8
FAN01G2924 Fragaria x ananassa HOM05D000009 ORTHO05D000008 4.5e-13 77.4 64 68.8
RcHm_v2.0_Chr1g0369611 Rosa chinensis HOM05D000009 ORTHO05D000008 5.9e-13 77.0 63 69.8
RcHm_v2.0_Chr1g0368631 Rosa chinensis HOM05D000009 ORTHO05D000008 7.6e-13 76.6 63 69.8
FAN10G0321 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.3e-12 75.9 64 68.8
RcHm_v2.0_Chr1g0361911 Rosa chinensis HOM05D000009 ORTHO05D000008 2.2e-12 75.1 64 68.8
RcHm_v2.0_Chr1g0367821 Rosa chinensis HOM05D000009 ORTHO05D000008 2.2e-12 75.1 63 66.7
RcHm_v2.0_Chr1g0367831 Rosa chinensis HOM05D000009 ORTHO05D000008 1.1e-11 72.8 60 68.3
FvH4_7g23850 Fragaria vesca HOM05D000009 ORTHO05D000008 1.8e-09 65.5 62 61.3
FAN06G1029 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.8e-09 65.5 62 61.3
FAN06G4861 Fragaria x ananassa HOM05D000009 ORTHO05D003343 1.8e-09 65.5 62 61.3
FAN14G3170 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.1e-09 63.9 60 56.7
RcHm_v2.0_Chr2g0134661 Rosa chinensis HOM05D000009 ORTHO05D000008 1.9e-08 62.0 63 55.6
FvH4_7g21941 Fragaria vesca HOM05D000009 ORTHO05D003343 5.7e-08 60.5 63 52.4
FvH4_7g22004 Fragaria vesca HOM05D000009 ORTHO05D003343 5.7e-08 60.5 63 52.4
FAN01G2886 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.7e-08 60.5 63 52.4
FAN06G3704 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.7e-08 60.5 63 52.4
FAN18G3778 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.7e-08 60.5 63 52.4
Duzib264G1019 Durio zibethinus HOM05D000009 ORTHO05D000008 7.4e-08 60.1 59 55.9
RcHm_v2.0_Chr3g0492181 Rosa chinensis HOM05D000009 ORTHO05D000008 7.4e-08 60.1 60 56.7
RcHm_v2.0_Chr4g0389051 Rosa chinensis HOM05D000009 ORTHO05D000008 7.4e-08 60.1 60 55.0
FAN01G2283 Fragaria x ananassa HOM05D000009 ORTHO05D000008 9.7e-08 59.7 63 50.8
FvH4_4g26300 Fragaria vesca HOM05D000009 ORTHO05D000008 1.3e-07 59.3 63 50.8
FvH4_6g51140 Fragaria vesca HOM05D000009 ORTHO05D000008 1.3e-07 59.3 60 56.7
FAN12G1678 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.3e-07 59.3 63 50.8
FAN14G3267 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.3e-07 59.3 60 56.7
FAN01G2036 Fragaria x ananassa HOM05D000009 ORTHO05D003343 1.6e-07 58.9 65 50.8
RcHm_v2.0_Chr2g0139801 Rosa chinensis HOM05D000009 ORTHO05D000008 1.6e-07 58.9 60 51.7
Duzib264G0903 Durio zibethinus HOM05D000009 ORTHO05D000008 2.2e-07 58.5 59 54.2
FAN06G2429 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.2e-07 58.5 60 53.3
RcHm_v2.0_Chr2g0135051 Rosa chinensis HOM05D000009 ORTHO05D000008 2.2e-07 58.5 60 50.0
FAN03G1416 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.8e-07 58.2 60 55.0
RcHm_v2.0_Chr1g0366291 Rosa chinensis HOM05D000009 ORTHO05D000008 2.8e-07 58.2 60 55.0
FAN06G0270 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.7e-07 57.8 60 51.7
MD03G1045400 Malus domestica HOM05D000009 ORTHO05D000008 4.8e-07 57.4 60 51.7
FvH4_7g26370 Fragaria vesca HOM05D000009 ORTHO05D000008 6.3e-07 57.0 60 53.3
FAN06G3227 Fragaria x ananassa HOM05D000009 ORTHO05D000008 6.3e-07 57.0 60 53.3
RcHm_v2.0_Chr2g0120611 Rosa chinensis HOM05D000009 ORTHO05D000008 6.3e-07 57.0 60 50.0
RcHm_v2.0_Chr2g0139881 Rosa chinensis HOM05D000009 ORTHO05D000008 6.3e-07 57.0 63 46.0
COL.COLO4_29255 Corchorus olitorius HOM05D000009 ORTHO05D000008 8.2e-07 56.6 56 57.1
FAN07G0025 Fragaria x ananassa HOM05D000009 ORTHO05D000008 8.2e-07 56.6 63 49.2
MD11G1063900 Malus domestica HOM05D000009 ORTHO05D000008 8.2e-07 56.6 60 51.7
MD11G1064900 Malus domestica HOM05D000009 ORTHO05D000008 8.2e-07 56.6 64 50.0
RcHm_v2.0_Chr2g0135001 Rosa chinensis HOM05D000009 ORTHO05D000008 8.2e-07 56.6 63 50.8
RcHm_v2.0_Chr5g0003421 Rosa chinensis HOM05D000009 ORTHO05D000008 8.2e-07 56.6 64 48.4
FAN06G3357 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.1e-06 56.2 56 53.6
FAN10G0759 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.1e-06 56.2 60 50.0
FvH4_6g29480 Fragaria vesca HOM05D000009 ORTHO05D000008 1.4e-06 55.8 63 47.6
FAN09G2908 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.4e-06 55.8 63 47.6
COL.COLO4_15699 Corchorus olitorius HOM05D000009 ORTHO05D000008 1.8e-06 55.5 56 57.1
Duzib264G0547 Durio zibethinus HOM05D000009 ORTHO05D000008 2.4e-06 55.1 59 54.2
FvH4_7g22591 Fragaria vesca HOM05D000009 ORTHO05D003343 2.4e-06 55.1 60 55.0
FvH4_7g23500 Fragaria vesca HOM05D000009 ORTHO05D000008 2.4e-06 55.1 60 51.7
FAN06G0330 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.4e-06 55.1 60 51.7
FAN06G4482 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.4e-06 55.1 60 51.7
FAN02G0151 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.1e-06 54.7 63 49.2
FAN03G0878 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.1e-06 54.7 56 51.8
COL.COLO4_29253 Corchorus olitorius HOM05D000009 ORTHO05D000008 4.1e-06 54.3 56 55.4
COL.COLO4_29254 Corchorus olitorius HOM05D000009 ORTHO05D000008 4.1e-06 54.3 56 51.8
FvH4_6g30331 Fragaria vesca HOM05D000009 ORTHO05D000008 4.1e-06 54.3 63 49.2
FAN14G3010 Fragaria x ananassa HOM05D000009 ORTHO05D000008 4.1e-06 54.3 60 51.7
Prupe.1G524900 Prunus persica HOM05D000009 ORTHO05D000008 4.1e-06 54.3 60 46.7
RcHm_v2.0_Chr2g0134631 Rosa chinensis HOM05D000009 ORTHO05D003343 4.1e-06 54.3 60 50.0
RcHm_v2.0_Chr7g0229831 Rosa chinensis HOM05D000009 ORTHO05D000008 5.3e-06 53.9 60 50.0
RcHm_v2.0_Chr7g0231561 Rosa chinensis HOM05D000009 ORTHO05D000008 5.3e-06 53.9 60 50.0
FvH4_6g52150 Fragaria vesca HOM05D000009 ORTHO05D000008 6.9e-06 53.5 60 51.7
Nn4g24665 Nelumbo nucifera HOM05D000009 ORTHO05D000008 6.9e-06 53.5 56 50.0
COL.COLO4_29245 Corchorus olitorius HOM05D000009 ORTHO05D003343 9.0e-06 53.1 56 51.8
COL.COLO4_29252 Corchorus olitorius HOM05D000009 ORTHO05D000008 9.0e-06 53.1 56 51.8
FvH4_3g02290 Fragaria vesca HOM05D000009 ORTHO05D000008 9.0e-06 53.1 64 46.9
FAN05G3192 Fragaria x ananassa HOM05D000009 ORTHO05D003343 9.0e-06 53.1 63 47.6
FAN18G3363 Fragaria x ananassa HOM05D000009 ORTHO05D000008 9.0e-06 53.1 60 50.0
Prupe.1G545000 Prunus persica HOM05D000009 ORTHO05D000008 9.0e-06 53.1 60 48.3
Prupe.3G087900 Prunus persica HOM05D000009 ORTHO05D000008 9.0e-06 53.1 59 50.8
Prupe.3G092700 Prunus persica HOM05D000009 ORTHO05D000008 9.0e-06 53.1 63 47.6
RcHm_v2.0_Chr2g0142201 Rosa chinensis HOM05D000009 ORTHO05D000008 9.0e-06 53.1 60 51.7


User provided reference genes

Program Settings