Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G4511 Fragaria x ananassa HOM05D005893 ORTHO05D007295 5.6e-112 407.9 252 100.0
FvH4_7g19000 Fragaria vesca HOM05D005893 ORTHO05D007295 2.1e-111 406.0 252 99.2
FAN06G1961 Fragaria x ananassa HOM05D005893 ORTHO05D007295 3.1e-110 402.1 252 98.8
FAN03G3224 Fragaria x ananassa HOM05D005893 ORTHO05D007295 4.0e-110 401.7 252 98.0
FAN10G0987 Fragaria x ananassa HOM05D005893 ORTHO05D007295 9.0e-102 374.0 250 93.6
FAN01G0197 Fragaria x ananassa HOM05D005893 ORTHO05D007295 5.3e-94 348.2 225 95.6
FAN06G0522 Fragaria x ananassa HOM05D003292 ORTHO05D004237 3.4e-77 292.4 232 85.3
RcHm_v2.0_Chr1g0362931 Rosa chinensis HOM05D005893 ORTHO05D007295 5.0e-76 288.5 244 63.5
FAN10G2891 Fragaria x ananassa HOM05D005893 ORTHO05D007295 1.9e-51 206.8 161 92.5
MD07G1171800 Malus domestica HOM05D005893 ORTHO05D007295 5.0e-44 182.2 243 45.7
MD01G1105600 Malus domestica HOM05D005893 ORTHO05D007295 4.2e-43 179.1 235 44.3
Cfa001666 Carpinus fangiana HOM05D005893 ORTHO05D007295 5.2e-41 172.2 238 46.2
CiPaw.01G270700 Carya illinoinensis HOM05D005893 ORTHO05D007295 5.7e-40 168.7 242 45.5
QL08p055159 Quercus lobata HOM05D005893 ORTHO05D007295 9.8e-40 167.9 243 42.4
Dinv31297 Davidia involucrata HOM05D005893 ORTHO05D007295 4.8e-39 165.6 237 43.5
Haze_16866 Corylus avellana HOM05D005893 ORTHO05D007295 9.1e-38 161.4 207 45.4
Glyma.20G181200 Glycine max HOM05D005893 ORTHO05D007295 9.1e-38 161.4 236 42.8
Cpa.g.sc53.97 Carica papaya HOM05D005893 ORTHO05D007295 1.6e-37 160.6 239 42.3
Ciclev10030991m.g Citrus clementina HOM05D003292 ORTHO05D004237 2.7e-37 159.8 113 68.1
Glyma.10G209400 Glycine max HOM05D005893 ORTHO05D007295 2.7e-37 159.8 235 41.3
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 7.7e-37 158.3 206 42.7
Potri.008G037300 Populus trichocarpa HOM05D005893 ORTHO05D007295 2.3e-36 156.8 235 41.7
Thecc.10G078600 Theobroma cacao HOM05D005893 ORTHO05D002604 2.3e-36 156.8 231 43.7
Actinidia06754 Actinidia chinensis HOM05D005893 ORTHO05D007295 2.9e-36 156.4 239 41.4
COL.COLO4_38473 Corchorus olitorius HOM05D005893 ORTHO05D007295 3.8e-36 156.0 232 44.0
HanXRQChr08g0218681 Helianthus annuus HOM05D005893 ORTHO05D007295 3.8e-36 156.0 99 70.7
Phvul.007G096700 Phaseolus vulgaris HOM05D005893 ORTHO05D007295 1.1e-35 154.5 236 41.1
Manes.07G096800 Manihot esculenta HOM05D005893 ORTHO05D007295 1.5e-35 154.1 242 42.1
Psat6g182280 Pisum sativum HOM05D005893 ORTHO05D007295 4.2e-35 152.5 204 42.6
Sabra08G0025100 Salix brachista HOM05D005893 ORTHO05D007295 4.2e-35 152.5 234 42.7
VMungo0720G1965 Vigna mungo HOM05D005893 ORTHO05D007295 4.2e-35 152.5 99 70.7
DCAR_019095 Daucus carota HOM05D005893 ORTHO05D007295 5.5e-35 152.1 99 69.7
ECA233G2346 Erigeron canadensis HOM05D005893 ORTHO05D007295 7.2e-35 151.8 94 72.3
Sopen05g031760 Solanum pennellii HOM05D005893 ORTHO05D007295 7.2e-35 151.8 107 69.2
TAR633G2388 Trochodendron aralioides HOM05D005893 ORTHO05D007295 7.2e-35 151.8 242 41.7
PGSC0003DMG400027152 Solanum tuberosum HOM05D005893 ORTHO05D007295 9.5e-35 151.4 107 69.2
Lsat_1_v5_gn_8_20480 Lactuca sativa HOM05D005893 ORTHO05D007295 1.6e-34 150.6 109 62.4
PGR142G3224 Punica granatum HOM05D005893 ORTHO05D007295 1.6e-34 150.6 99 70.7
TPR.G1908 Trifolium pratense HOM05D005893 ORTHO05D007295 1.6e-34 150.6 98 71.4
CsaV3_5G036140 Cucumis sativus L. HOM05D005893 ORTHO05D007295 2.1e-34 150.2 99 70.7
Os02g0819700 Oryza sativa ssp. japonica HOM05D005893 ORTHO05D007295 2.1e-34 150.2 97 71.1
Eucgr.G02856 Eucalyptus grandis HOM05D005893 ORTHO05D007295 2.8e-34 149.8 235 40.0
Atru.chr12.817 Acer truncatum HOM05D005893 ORTHO05D007295 3.6e-34 149.4 98 70.4
Dinv31211 Davidia involucrata HOM05D005893 ORTHO05D007295 3.6e-34 149.4 231 41.1
SalBow6G7151 Salvia bowleyana HOM05D005893 ORTHO05D007295 3.6e-34 149.4 107 64.5
HPP92_025345 Vanilla planifolia HOM05D005893 ORTHO05D007295 3.6e-34 149.4 112 65.2
ClCG05G021120 Citrullus lanatus HOM05D005893 ORTHO05D007295 4.7e-34 149.1 99 69.7
Nitab4.5_0007148g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 4.7e-34 149.1 100 69.0
Zm00001eb259110 Zea mays HOM05D005893 ORTHO05D007295 4.7e-34 149.1 104 63.5
Migut.F01727 Erythranthe guttata HOM05D005893 ORTHO05D007295 6.1e-34 148.7 92 75.0
Lj5g0004254 Lotus japonicus HOM05D005893 ORTHO05D007295 6.1e-34 148.7 102 67.6
Lj5g0008044 Lotus japonicus HOM05D005893 ORTHO05D007295 6.1e-34 148.7 102 67.6
Lj5g0026776 Lotus japonicus HOM05D005893 ORTHO05D007295 6.1e-34 148.7 102 67.6
Cfa014465 Carpinus fangiana HOM05D005893 ORTHO05D007295 8.0e-34 148.3 98 70.4
MELO3C012415.2 Cucumis melo HOM05D005893 ORTHO05D007295 8.0e-34 148.3 99 69.7
Gohir.A05G295100 Gossypium hirsutum HOM05D005893 ORTHO05D007295 8.0e-34 148.3 234 41.0
Sed0025931 Sechium edule HOM05D005893 ORTHO05D007295 8.0e-34 148.3 99 69.7
Ca_10554_v3 Cicer arietinum L. HOM05D005893 ORTHO05D007295 1.0e-33 147.9 99 67.7
Oeu021200.1 Olea europaea HOM05D005893 ORTHO05D007295 1.0e-33 147.9 101 68.3
Duzib106G0129 Durio zibethinus HOM05D005893 ORTHO05D007295 1.4e-33 147.5 99 70.7
Gorai.009G312400 Gossypium raimondii HOM05D005893 ORTHO05D007295 1.4e-33 147.5 234 39.7
Cc02_g11140 Coffea canephora HOM05D005893 ORTHO05D007295 1.8e-33 147.1 109 64.2
Lalb_Chr02g0152261 Lupinus albus HOM05D005893 ORTHO05D007295 1.8e-33 147.1 99 66.7
MSTRG.382 Avicennia marina HOM05D005893 ORTHO05D007295 3.0e-33 146.4 92 73.9
Sed0005810 Sechium edule HOM05D005893 ORTHO05D007295 3.0e-33 146.4 99 66.7
Gohir.D05G295800 Gossypium hirsutum HOM05D005893 ORTHO05D007295 5.2e-33 145.6 232 39.7
TWI15G0972 Tripterygium wilfordii HOM05D005893 ORTHO05D007295 5.2e-33 145.6 91 73.6
Nitab4.5_0002194g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 6.8e-33 145.2 98 68.4
THA.LOC104825224 Tarenaya hassleriana HOM05D005893 ORTHO05D007295 6.8e-33 145.2 105 62.9
Lj2C17T1 Lonicera japonica HOM05D005893 ORTHO05D007295 8.9e-33 144.8 99 68.7
Hund09872 Selenicereus undatus HOM05D005893 ORTHO05D007295 8.9e-33 144.8 101 67.3
CAN.G305.42 Capsicum annuum HOM05D005893 ORTHO05D007295 1.5e-32 144.1 106 64.2
SalBow7G0798 Salvia bowleyana HOM05D005893 ORTHO05D007295 1.5e-32 144.1 99 65.7
SGA_v2.0_scaffold2G01368 Striga asiatica HOM05D005893 ORTHO05D007295 1.5e-32 144.1 107 59.8
Thhalv10010741m.g Eutrema salsugineum HOM05D005893 ORTHO05D007295 2.0e-32 143.7 90 71.1
unitig_46.g18354 Utricularia gibba HOM05D005893 ORTHO05D007295 2.0e-32 143.7 108 61.1
Hma1.2p1_1458F.1_g284765 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 2.6e-32 143.3 99 67.7
Medtr1g094720 Medicago truncatula HOM05D005893 ORTHO05D007295 2.6e-32 143.3 99 64.6
Sc20g0001660 Simmondsia chinensis HOM05D005893 ORTHO05D007295 3.4e-32 142.9 94 70.2
CARHR164770 Cardamine hirsuta HOM05D005893 ORTHO05D007295 4.4e-32 142.5 111 59.5
Nn2g11535 Nelumbo nucifera HOM05D005893 ORTHO05D007295 4.4e-32 142.5 241 38.6
Peaxi162Scf00431g00001 Petunia axillaris HOM05D005893 ORTHO05D007295 4.4e-32 142.5 104 65.4
unitig_37.g12607 Utricularia gibba HOM05D000329 ORTHO05D002132 5.7e-32 142.1 91 70.3
Aa31sc66G40 Aethionema arabicum HOM05D005893 ORTHO05D007295 2.8e-31 139.8 94 67.0
Ah.01g004770 Amaranthus hybridus HOM05D005893 ORTHO05D007295 2.8e-31 139.8 98 64.3
Sp5g07600 Schrenkiella parvula HOM05D005893 ORTHO05D007295 2.8e-31 139.8 96 64.6
PSO339G3974 Papaver somniferum HOM05D005893 ORTHO05D007295 3.7e-31 139.4 98 62.2
CANSAT56G0338 Cannabis sativa HOM05D005893 ORTHO05D007295 4.9e-31 139.0 238 39.5
Carub.0005s2142 Capsella rubella HOM05D005893 ORTHO05D007295 8.3e-31 138.3 96 65.6
AT3G54826 Arabidopsis thaliana HOM05D005893 ORTHO05D007295 1.8e-30 137.1 112 57.1
MBI05_g31459_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.8e-30 137.1 98 64.3
BcaC07g39781 Brassica carinata HOM05D005893 ORTHO05D007295 4.1e-30 136.0 103 58.3
C08p29970 Brassica napus HOM05D005893 ORTHO05D007295 4.1e-30 136.0 103 58.3
BolC8t50606H Brassica oleracea HOM05D005893 ORTHO05D007295 4.1e-30 136.0 103 58.3
EL10Ac6g14183 Beta vulgaris HOM05D005893 ORTHO05D007295 5.4e-30 135.6 92 69.6
SEGI_03670 Sequoiadendron giganteum HOM05D005893 ORTHO05D007295 5.4e-30 135.6 91 63.7
ATR0680G313 Amborella trichopoda HOM05D005893 ORTHO05D007295 7.0e-30 135.2 107 58.9
BcaC08g44701 Brassica carinata HOM05D005893 ORTHO05D007295 9.2e-30 134.8 96 61.5
A07p22290 Brassica napus HOM05D005893 ORTHO05D007295 9.2e-30 134.8 96 61.5
C06p22370 Brassica napus HOM05D005893 ORTHO05D007295 9.2e-30 134.8 96 61.5
BraA07t29907Z Brassica rapa HOM05D005893 ORTHO05D007295 9.2e-30 134.8 96 61.5
Aqoxy1G01187 Aquilegia oxysepala HOM05D005893 ORTHO05D007295 1.2e-29 134.4 97 63.9
AL5G35910 Arabidopsis lyrata HOM05D005893 ORTHO05D007295 2.0e-29 133.7 96 62.5
EL10Ac6g14385 Beta vulgaris HOM05D005893 ORTHO05D007295 2.0e-29 133.7 92 68.5
BcaB01g00158 Brassica carinata HOM05D005893 ORTHO05D007295 2.0e-29 133.7 94 62.8
BcaB02g07716 Brassica carinata HOM05D005893 ORTHO05D007295 2.0e-29 133.7 96 60.4
BraA09t40232Z Brassica rapa HOM05D005893 ORTHO05D007295 2.7e-29 133.3 103 56.3
AUR62038482 Chenopodium quinoa HOM05D005893 ORTHO05D007295 2.7e-29 133.3 93 66.7
A09p47740 Brassica napus HOM05D005893 ORTHO05D007295 3.5e-29 132.9 103 56.3
vmacro07131 Vaccinium macrocarpon HOM05D000972 ORTHO05D001783 4.5e-29 132.5 96 63.5
AUR62014260 Chenopodium quinoa HOM05D005893 ORTHO05D007295 5.9e-29 132.1 91 67.0
Solyc05g053250.4 Solanum lycopersicum HOM05D005893 ORTHO05D007295 2.9e-28 129.8 91 67.0
Hma1.2p1_1458F.1_g284770 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 2.5e-27 126.7 81 71.6
GSVIVG01016242001 Vitis vinifera HOM05D003292 ORTHO05D004237 2.5e-27 126.7 219 37.9
AagrBONN_evm.TU.Sc2ySwM_228.2692 Anthoceros agrestis HOM05D005893 ORTHO05D007295 1.2e-26 124.4 105 56.2
Mapoly0143s0034 Marchantia polymorpha HOM05D005893 ORTHO05D007295 2.1e-26 123.6 100 56.0
CBR_g38445 Chara braunii HOM05D005893 ORTHO05D007295 4.9e-23 112.5 91 53.8
Pp3c10_20870 Physcomitrium patens HOM05D005893 ORTHO05D007295 6.4e-23 112.1 89 55.1
CDE01G0774 Ceratophyllum demersum HOM05D005893 ORTHO05D007295 3.2e-22 109.8 74 66.2
SGA_v2.0_scaffold223G42811 Striga asiatica HOM05D005893 ORTHO05D007295 1.6e-21 107.5 86 53.5
SMO364G0951 Selaginella moellendorffii HOM05D005893 ORTHO05D007295 3.9e-20 102.8 72 59.7
SGA_v2.0_scaffold51G18702 Striga asiatica HOM05D005893 ORTHO05D007295 9.5e-19 98.2 107 43.9
SGA_v2.0_scaffold211G42109 Striga asiatica HOM05D005893 ORTHO05D007295 4.4e-16 89.4 95 43.2
MBI05_g14981_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 5.8e-16 89.0 103 47.6
MCO14G392 Micromonas commoda HOM05D005893 ORTHO05D007295 7.5e-16 88.6 96 46.9
MBI05_g31456_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 4.9e-15 85.9 91 48.4
Cre07.g334851 Chlamydomonas reinhardtii HOM05D005893 ORTHO05D007295 3.9e-12 76.3 78 47.4
Peaxi162Scf00066g01616 Petunia axillaris HOM05D005893 ORTHO05D007295 2.5e-11 73.6 49 61.2
MBI05_g14980_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 3.3e-11 73.2 96 43.8
Cfa025074 Carpinus fangiana HOM05D005893 ORTHO05D007295 7.3e-11 72.0 70 45.7
MBI08_g29407_MAGBIO Magnolia biondii HOM05D002127 ORTHO05D007295 9.5e-11 71.6 63 54.0
Rhsim05G0120600 Rhododendron simsii HOM05D005893 ORTHO05D007295 5.2e-09 65.9 46 65.2
unitig_27.g25229 Utricularia gibba HOM05D002826 ORTHO05D003105 5.2e-09 65.9 81 38.3
SGA_v2.0_scaffold59G20634 Striga asiatica HOM05D002826 ORTHO05D003105 1.2e-08 64.7 75 38.7
MBI19_g05599_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.5e-08 64.3 63 52.4
Mapoly0032s0026 Marchantia polymorpha HOM05D005893 ORTHO05D007295 1.5e-08 64.3 78 37.2
HanXRQChr11g0335291 Helianthus annuus HOM05D002826 ORTHO05D003105 7.6e-08 62.0 85 35.3
HanXRQChr16g0527021 Helianthus annuus HOM05D002826 ORTHO05D003105 1.3e-07 61.2 85 35.3
Lsat_1_v5_gn_4_20381 Lactuca sativa HOM05D002826 ORTHO05D003105 1.3e-07 61.2 81 37.0
PRCOL_00001193 Prasinoderma coloniale HOM05D001599 ORTHO05D003184 1.7e-07 60.8 89 36.0
SalBow8G2187 Salvia bowleyana HOM05D002826 ORTHO05D003105 1.7e-07 60.8 81 34.6
Actinidia30164 Actinidia chinensis HOM05D000508 ORTHO05D000371 2.2e-07 60.5 67 43.3
ClCG05G023210 Citrullus lanatus HOM05D002826 ORTHO05D003105 2.2e-07 60.5 74 37.8
Nitab4.5_0010558g0030 Nicotiana tabacum HOM05D002826 ORTHO05D003105 2.2e-07 60.5 73 39.7
Manes.14G095500 Manihot esculenta HOM05D002826 ORTHO05D003105 3.7e-07 59.7 80 36.2
MD13G1049900 Malus domestica HOM05D002826 ORTHO05D003105 4.9e-07 59.3 61 39.3
RcHm_v2.0_Chr4g0436371 Rosa chinensis HOM05D002826 ORTHO05D003105 4.9e-07 59.3 83 37.3
Solyc05g010070.3 Solanum lycopersicum HOM05D002826 ORTHO05D003105 4.9e-07 59.3 73 37.0
MELO3C012198.2 Cucumis melo HOM05D002826 ORTHO05D003105 6.4e-07 58.9 74 36.5
CsaV3_5G033810 Cucumis sativus L. HOM05D002826 ORTHO05D003105 6.4e-07 58.9 74 36.5
Migut.E00281 Erythranthe guttata HOM05D002826 ORTHO05D003105 6.4e-07 58.9 65 41.5
MBI04_g06289_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 6.4e-07 58.9 90 37.8
Cc11_g10940 Coffea canephora HOM05D002826 ORTHO05D003105 8.3e-07 58.5 62 41.9
MD16G1050900 Malus domestica HOM05D002826 ORTHO05D003105 8.3e-07 58.5 60 40.0
Peaxi162Scf00198g00412 Petunia axillaris HOM05D002826 ORTHO05D003105 8.3e-07 58.5 67 38.8
PGSC0003DMG400025127 Solanum tuberosum HOM05D000508 ORTHO05D000371 8.3e-07 58.5 67 38.8
CAN.G184.64 Capsicum annuum HOM05D002826 ORTHO05D003105 1.1e-06 58.2 60 43.3
FvH4_4g28420 Fragaria vesca HOM05D002826 ORTHO05D003105 1.4e-06 57.8 67 38.8
FAN07G1210 Fragaria x ananassa HOM05D002826 ORTHO05D003105 1.4e-06 57.8 67 38.8
FAN12G4176 Fragaria x ananassa HOM05D002826 ORTHO05D003105 1.4e-06 57.8 67 38.8
Medtr4g045783 Medicago truncatula HOM05D002826 ORTHO05D003105 1.4e-06 57.8 74 35.1
Potri.010G132400 Populus trichocarpa HOM05D002826 ORTHO05D003105 1.9e-06 57.4 71 38.0
AagrBONN_evm.TU.Sc2ySwM_369.238 Anthoceros agrestis HOM05D002826 ORTHO05D003105 3.2e-06 56.6 61 39.3
FAN22G0168 Fragaria x ananassa HOM05D002826 ORTHO05D003105 3.2e-06 56.6 54 42.6
Sabra10G0101100 Salix brachista HOM05D002826 ORTHO05D003105 3.2e-06 56.6 71 38.0
TPR.G2677 Trifolium pratense HOM05D002826 ORTHO05D003105 3.2e-06 56.6 62 40.3
ATR0743G230 Amborella trichopoda HOM05D002826 ORTHO05D003105 5.4e-06 55.8 62 40.3
Mapoly0005s0251 Marchantia polymorpha HOM05D002826 ORTHO05D003105 5.4e-06 55.8 54 40.7
Sopen05g005870 Solanum pennellii HOM05D002826 ORTHO05D003105 5.4e-06 55.8 60 38.3
TWI75G1715 Tripterygium wilfordii HOM05D002826 ORTHO05D003105 5.4e-06 55.8 73 37.0
CDE10G0793 Ceratophyllum demersum HOM05D002826 ORTHO05D003105 7.1e-06 55.5 68 39.7


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