Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G4466 Fragaria x ananassa HOM05D008163 ORTHO05D010305 1.3e-70 269.6 133 100.0
FvH4_7g02510 Fragaria vesca HOM05D008163 ORTHO05D010305 9.0e-61 236.9 125 93.6
FAN03G0237 Fragaria x ananassa HOM05D008163 ORTHO05D010305 1.3e-59 233.0 118 97.5
RcHm_v2.0_Chr1g0321141 Rosa chinensis HOM05D008163 ORTHO05D010305 9.4e-58 226.9 125 88.8
RcHm_v2.0_Chr2g0149911 Rosa chinensis HOM05D008163 ORTHO05D010305 6.3e-54 214.2 118 88.1
Prupe.4G282300 Prunus persica HOM05D008163 ORTHO05D010305 3.2e-34 148.7 108 72.2
Prupe.7G030100 Prunus persica HOM05D008163 ORTHO05D010305 1.6e-33 146.4 108 70.4
MD12G1044600 Malus domestica HOM05D008163 ORTHO05D010305 4.7e-33 144.8 111 68.5
MD15G1374400 Malus domestica HOM05D008163 ORTHO05D010305 4.7e-33 144.8 111 68.5
SHI03043 Sapria himalayana HOM05D008163 ORTHO05D010305 8.0e-33 144.1 104 66.3
Sabra07G0061500 Salix brachista HOM05D008163 ORTHO05D010305 2.3e-32 142.5 110 67.3
Potri.007G072900 Populus trichocarpa HOM05D008163 ORTHO05D010305 3.0e-32 142.1 110 65.5
Sabra15G0022500 Salix brachista HOM05D008163 ORTHO05D010305 4.0e-32 141.7 110 66.4
Hma1.2p1_0136F.1_g062003 Hydrangea macrophylla HOM05D008163 ORTHO05D010305 9.7e-31 137.1 112 63.4
Carub.0003s2247 Capsella rubella HOM05D008163 ORTHO05D010305 6.3e-30 134.4 102 67.6
SalBow1G5351 Salvia bowleyana HOM05D008163 ORTHO05D010305 2.4e-29 132.5 105 65.7
SalBow1G7817 Salvia bowleyana HOM05D008163 ORTHO05D010305 2.4e-29 132.5 105 65.7
AL3G36570 Arabidopsis lyrata HOM05D008163 ORTHO05D010305 3.5e-28 128.6 112 60.7
Sp3g20090 Schrenkiella parvula HOM05D008163 ORTHO05D010305 3.5e-28 128.6 110 61.8
CARHR098200 Cardamine hirsuta HOM05D008163 ORTHO05D010305 4.5e-28 128.3 107 62.6
Thhalv10021368m.g Eutrema salsugineum HOM05D008163 ORTHO05D010305 4.5e-28 128.3 98 68.4
Aa31LG8G8870 Aethionema arabicum HOM05D008163 ORTHO05D010305 5.9e-28 127.9 98 65.3
BraA03t13418Z Brassica rapa HOM05D008163 ORTHO05D010305 7.7e-28 127.5 110 61.8
AT3G22300 Arabidopsis thaliana HOM05D008163 ORTHO05D010305 1.0e-27 127.1 110 60.9
HanXRQChr07g0196921 Helianthus annuus HOM05D003855 ORTHO05D004722 1.0e-27 127.1 123 55.3
FAN10G0940 Fragaria x ananassa HOM05D008163 ORTHO05D010305 1.3e-27 126.7 67 95.5
BcaB06g26334 Brassica carinata HOM05D008163 ORTHO05D010305 1.7e-27 126.3 110 60.9
A03p42710 Brassica napus HOM05D008163 ORTHO05D010305 1.7e-27 126.3 110 60.9
A05p26470 Brassica napus HOM05D008163 ORTHO05D010305 3.8e-27 125.2 107 61.7
BraA05t21520Z Brassica rapa HOM05D008163 ORTHO05D010305 3.8e-27 125.2 107 61.7
ECA238G1787 Erigeron canadensis HOM05D003855 ORTHO05D004722 6.5e-27 124.4 107 58.9
BcaC01g03452 Brassica carinata HOM05D008163 ORTHO05D010305 1.1e-26 123.6 98 65.3
C03p52430 Brassica napus HOM05D008163 ORTHO05D010305 1.1e-26 123.6 98 65.3
BolC3t17513H Brassica oleracea HOM05D008163 ORTHO05D010305 1.1e-26 123.6 98 65.3
BcaC05g28083 Brassica carinata HOM05D008163 ORTHO05D010305 3.2e-26 122.1 98 65.3
C05p41060 Brassica napus HOM05D008163 ORTHO05D010305 3.2e-26 122.1 98 65.3
BolC5t32848H Brassica oleracea HOM05D008163 ORTHO05D010305 3.2e-26 122.1 98 65.3
Solyc11g063600.3 Solanum lycopersicum HOM05D008163 ORTHO05D010305 7.2e-26 120.9 112 59.8
Manes.09G036100 Manihot esculenta HOM05D008163 ORTHO05D010305 1.4e-24 116.7 81 69.1
Actinidia29350 Actinidia chinensis HOM05D008163 ORTHO05D010305 5.2e-24 114.8 90 62.2
DCAR_027582 Daucus carota HOM05D008163 ORTHO05D010305 1.5e-23 113.2 118 50.0
CSS0033547 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 9.8e-23 110.5 90 63.3
CSS0047821 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 9.8e-23 110.5 90 63.3
Rhsim06G0223600 Rhododendron simsii HOM05D000504 ORTHO05D000403 1.7e-22 109.8 77 67.5
Zm00001eb215210 Zea mays HOM05D008163 ORTHO05D010305 2.8e-22 109.0 106 53.8
Prupe.7G029400 Prunus persica HOM05D008163 ORTHO05D010305 6.3e-22 107.8 74 73.0
Os12g0517200 Oryza sativa ssp. japonica HOM05D008163 ORTHO05D010305 1.1e-21 107.1 109 53.2
Hund21444 Selenicereus undatus HOM05D008163 ORTHO05D010305 1.1e-21 107.1 98 56.1
SEGI_07019 Sequoiadendron giganteum HOM05D008163 ORTHO05D010305 3.1e-21 105.5 100 55.0
Zm00001eb056700 Zea mays HOM05D008163 ORTHO05D010305 3.1e-21 105.5 106 52.8
PSO017G7110 Papaver somniferum HOM05D008163 ORTHO05D010305 7.7e-20 100.9 84 58.3
PSO170G4613 Papaver somniferum HOM05D008163 ORTHO05D010305 7.7e-20 100.9 84 58.3
Nn1g09991 Nelumbo nucifera HOM05D008163 ORTHO05D010305 2.3e-19 99.4 83 62.7
Nn1g10091 Nelumbo nucifera HOM05D008163 ORTHO05D010305 2.3e-19 99.4 83 62.7
TPR.G20554 Trifolium pratense HOM05D008163 ORTHO05D010305 3.8e-19 98.6 85 62.4
AUR62012772 Chenopodium quinoa HOM05D008163 ORTHO05D010305 5.0e-19 98.2 98 54.1
AUR62021886 Chenopodium quinoa HOM05D008163 ORTHO05D010305 6.6e-19 97.8 98 53.1
Lalb_Chr00c21g0405831 Lupinus albus HOM05D008163 ORTHO05D010305 6.6e-19 97.8 84 61.9
EL10Ac8g20156 Beta vulgaris HOM05D008163 ORTHO05D010305 2.5e-18 95.9 90 54.4
Nitab4.5_0000161g0030 Nicotiana tabacum HOM05D008163 ORTHO05D010305 2.5e-18 95.9 87 56.3
AUR62036216 Chenopodium quinoa HOM05D008163 ORTHO05D010305 7.2e-18 94.4 100 54.0
Ah.14g087810 Amaranthus hybridus HOM05D000967 ORTHO05D000796 9.5e-18 94.0 99 50.5
Nitab4.5_0001127g0310 Nicotiana tabacum HOM05D008163 ORTHO05D010305 6.1e-17 91.3 87 56.3
Pp3c3_3090 Physcomitrium patens HOM05D008163 ORTHO05D010305 6.1e-17 91.3 108 42.6
Nitab4.5_0000592g0150 Nicotiana tabacum HOM05D008163 ORTHO05D010305 1.2e-15 87.0 80 58.8
Nitab4.5_0000172g1360 Nicotiana tabacum HOM05D008163 ORTHO05D010305 2.8e-14 82.4 78 55.1
AagrBONN_evm.TU.Sc2ySwM_368.972 Anthoceros agrestis HOM05D008163 ORTHO05D010305 1.4e-13 80.1 100 43.0
MD07G1062900 Malus domestica HOM05D008163 ORTHO05D010305 1.8e-13 79.7 74 55.4
Glyma.17G185500 Glycine max HOM05D008163 ORTHO05D010305 4.3e-10 68.6 69 53.6
SMO234G0032 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 1.2e-09 67.0 96 40.6
SMO196G0141 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 2.1e-09 66.2 69 46.4
Nitab4.5_0001702g0010 Nicotiana tabacum HOM05D011509 ORTHO05D010305 2.3e-08 62.8 53 60.4


User provided reference genes

Program Settings