Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G4371 Fragaria x ananassa HOM05D012820 ORTHO05D012228 1.1e-52 209.5 98 100.0
FvH4_7g12370 Fragaria vesca HOM05D000098 ORTHO05D012228 2.9e-48 194.9 125 78.4
FAN06G0748 Fragaria x ananassa HOM05D000098 ORTHO05D012228 2.9e-48 194.9 125 78.4
FAN01G1668 Fragaria x ananassa HOM05D000098 ORTHO05D204177 1.1e-34 149.8 69 97.1
FAN03G3115 Fragaria x ananassa HOM05D012233 ORTHO05D001228 9.1e-34 146.7 69 95.7
RcHm_v2.0_Chr1g0352011 Rosa chinensis HOM05D000098 ORTHO05D001228 1.7e-19 99.4 125 46.4
RcHm_v2.0_Chr1g0352031 Rosa chinensis HOM05D000098 ORTHO05D001228 1.7e-19 99.4 125 46.4
RcHm_v2.0_Chr1g0352041 Rosa chinensis HOM05D000098 ORTHO05D001228 1.7e-19 99.4 125 46.4
FAN06G4840 Fragaria x ananassa HOM05D016453 ORTHO05D012228 5.3e-18 94.4 104 53.8
FAN01G1217 Fragaria x ananassa HOM05D000098 ORTHO05D001228 1.0e-16 90.1 101 48.5
FvH4_7g12430 Fragaria vesca HOM05D000098 ORTHO05D001228 1.7e-16 89.4 125 44.0
FAN06G1623 Fragaria x ananassa HOM05D012820 ORTHO05D012228 5.0e-16 87.8 93 50.5
FvH4_7g12380 Fragaria vesca HOM05D000098 ORTHO05D012228 6.5e-16 87.4 68 58.8
FAN06G0170 Fragaria x ananassa HOM05D000098 ORTHO05D012228 6.5e-16 87.4 68 58.8
FvH4_7g12440 Fragaria vesca HOM05D000098 ORTHO05D001228 2.7e-14 82.0 124 39.5
FAN06G4683 Fragaria x ananassa HOM05D000098 ORTHO05D012228 2.7e-14 82.0 124 39.5
FAN06G0630 Fragaria x ananassa HOM05D000098 ORTHO05D001228 6.1e-14 80.9 124 40.3
FAN10G0674 Fragaria x ananassa HOM05D000098 ORTHO05D001228 3.0e-13 78.6 121 39.7
FAN06G4064 Fragaria x ananassa HOM05D016453 ORTHO05D017011 6.8e-13 77.4 120 38.3
RcHm_v2.0_Chr1g0351251 Rosa chinensis HOM05D000098 ORTHO05D001228 6.8e-13 77.4 123 36.6
MD02G1199200 Malus domestica HOM05D000098 ORTHO05D001228 2.0e-12 75.9 110 39.1
FAN06G4989 Fragaria x ananassa HOM05D000098 ORTHO05D001228 3.4e-12 75.1 116 37.9
RcHm_v2.0_Chr1g0352111 Rosa chinensis HOM05D012820 ORTHO05D012228 4.4e-12 74.7 75 45.3
RcHm_v2.0_Chr1g0351271 Rosa chinensis HOM05D000098 ORTHO05D001228 5.7e-12 74.3 124 35.5
QL04p049808 Quercus lobata HOM05D000098 ORTHO05D001228 1.7e-11 72.8 74 50.0
FvH4_6g35310 Fragaria vesca HOM05D027753 ORTHO05D012228 2.8e-11 72.0 64 56.2
FAN09G4427 Fragaria x ananassa HOM05D027753 ORTHO05D012228 2.8e-11 72.0 64 56.2
Prupe.2G149200 Prunus persica HOM05D000098 ORTHO05D001228 2.8e-11 72.0 115 38.3
RcHm_v2.0_Chr1g0351161 Rosa chinensis HOM05D000098 ORTHO05D001228 2.8e-11 72.0 98 38.8
RcHm_v2.0_Chr1g0351311 Rosa chinensis HOM05D000098 ORTHO05D001228 3.7e-11 71.6 126 38.1
FAN10G0747 Fragaria x ananassa HOM05D012820 ORTHO05D012228 4.8e-11 71.2 66 48.5
RcHm_v2.0_Chr1g0351221 Rosa chinensis HOM05D000098 ORTHO05D035421 4.8e-11 71.2 116 39.7
FAN02G3295 Fragaria x ananassa HOM05D027753 ORTHO05D012228 6.3e-11 70.9 71 50.7
FAN06G0530 Fragaria x ananassa HOM05D012820 ORTHO05D012228 1.1e-10 70.1 116 38.8
FvH4_7g12970 Fragaria vesca HOM05D012820 ORTHO05D012228 1.4e-10 69.7 66 47.0
FvH4_7g12410 Fragaria vesca HOM05D000098 ORTHO05D035421 1.8e-10 69.3 115 37.4
FAN01G2080 Fragaria x ananassa HOM05D012820 ORTHO05D012228 3.1e-10 68.6 66 45.5
FAN01G0041 Fragaria x ananassa HOM05D000098 ORTHO05D001228 4.1e-10 68.2 80 45.0
FAN10G0511 Fragaria x ananassa HOM05D012820 ORTHO05D012228 7.0e-10 67.4 62 46.8
Haze_03415 Corylus avellana HOM05D004210 ORTHO05D005017 9.1e-10 67.0 67 47.8
Dinv23902 Davidia involucrata HOM05D000098 ORTHO05D001228 9.1e-10 67.0 74 45.9
FvH4_7g12960 Fragaria vesca HOM05D012820 ORTHO05D012228 9.1e-10 67.0 116 34.5
FAN06G4135 Fragaria x ananassa HOM05D000098 ORTHO05D035421 9.1e-10 67.0 110 37.3
FAN01G1360 Fragaria x ananassa HOM05D012820 ORTHO05D012228 1.2e-09 66.6 112 40.2
RcHm_v2.0_Chr1g0351241 Rosa chinensis HOM05D000098 ORTHO05D001228 1.6e-09 66.2 116 36.2
FvH4_7g12400 Fragaria vesca HOM05D000098 ORTHO05D045670 2.0e-09 65.9 68 50.0
FAN06G2957 Fragaria x ananassa HOM05D012820 ORTHO05D012228 2.0e-09 65.9 62 45.2
FAN06G4113 Fragaria x ananassa HOM05D018392 ORTHO05D045670 2.7e-09 65.5 59 52.5
FvH4_7g12420 Fragaria vesca HOM05D000098 ORTHO05D001228 1.3e-08 63.2 117 34.2
Dinv30358 Davidia involucrata HOM05D000098 ORTHO05D001228 2.9e-08 62.0 74 43.2
FAN10G1734 Fragaria x ananassa HOM05D013109 ORTHO05D015423 3.8e-08 61.6 74 43.2
FAN03G0220 Fragaria x ananassa HOM05D018392 ORTHO05D035570 1.5e-07 59.7 69 44.9
FvH4_7g16660 Fragaria vesca HOM05D018392 ORTHO05D035570 2.5e-07 58.9 69 44.9
FAN06G2594 Fragaria x ananassa HOM05D018392 ORTHO05D035570 2.5e-07 58.9 69 44.9
PGR142G3927 Punica granatum HOM05D000098 ORTHO05D001228 3.2e-07 58.5 74 40.5
Hma1.2p1_0892F.1_g233380 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 7.2e-07 57.4 74 41.9
FvH4_6g35320 Fragaria vesca HOM05D000098 ORTHO05D046117 2.1e-06 55.8 68 42.6
FAN10G3837 Fragaria x ananassa HOM05D000098 ORTHO05D012228 8.0e-06 53.9 59 40.7


User provided reference genes

Program Settings