Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G4219 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.7e-170 602.8 358 100.0
FAN02G0873 Fragaria x ananassa HOM05D006804 ORTHO05D009450 9.7e-142 507.3 412 73.5
FAN23G2251 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.0e-135 487.3 412 71.4
FAN05G1258 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.3e-135 486.9 412 73.8
FAN27G0746 Fragaria x ananassa HOM05D006804 ORTHO05D009450 2.3e-127 459.5 416 69.7
FAN14G0667 Fragaria x ananassa HOM05D006804 ORTHO05D009450 3.7e-125 452.2 404 69.3
FAN06G4879 Fragaria x ananassa HOM05D006804 ORTHO05D009450 8.2e-125 451.1 358 80.4
FvH4_6g19603 Fragaria vesca HOM05D006804 ORTHO05D009450 1.1e-124 450.7 399 69.7
FAN05G4247 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.8e-124 449.9 323 74.3
FvH4_3g23573 Fragaria vesca HOM05D006804 ORTHO05D009450 4.5e-123 445.3 358 76.3
FAN17G0038 Fragaria x ananassa HOM05D006804 ORTHO05D009450 3.8e-122 442.2 412 67.7
FAN28G0071 Fragaria x ananassa HOM05D006804 ORTHO05D009450 7.2e-121 438.0 323 73.1
FAN01G0073 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.7e-114 416.8 358 79.1
FAN06G4469 Fragaria x ananassa HOM05D006804 ORTHO05D009450 9.4e-113 411.0 404 65.3
FAN27G1604 Fragaria x ananassa HOM05D006804 ORTHO05D009450 3.1e-108 396.0 323 68.7
FAN22G0887 Fragaria x ananassa HOM05D006804 ORTHO05D009450 5.5e-105 385.2 390 65.1
FAN19G2723 Fragaria x ananassa HOM05D006804 ORTHO05D009450 2.4e-100 369.8 267 74.5
FAN14G0666 Fragaria x ananassa HOM05D006804 ORTHO05D009450 2.3e-87 326.6 246 71.5
FAN15G2773 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.4e-84 317.4 245 70.2
FAN11G0274 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.7e-82 310.5 235 72.3
FAN14G3662 Fragaria x ananassa HOM05D006804 ORTHO05D009450 3.0e-82 309.7 247 68.8
FAN25G1581 Fragaria x ananassa HOM05D006804 ORTHO05D009450 3.4e-78 296.2 398 53.5
FAN04G0529 Fragaria x ananassa HOM05D006804 ORTHO05D009450 2.1e-75 287.0 253 72.3
FAN04G0356 Fragaria x ananassa HOM05D006804 ORTHO05D009450 6.0e-75 285.4 301 64.8
FAN19G0556 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.0e-74 284.6 405 50.9
FAN09G1939 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.3e-74 284.3 405 51.1
FAN27G0922 Fragaria x ananassa HOM05D006804 ORTHO05D009450 3.0e-74 283.1 405 48.9
FAN10G0516 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.5e-73 280.8 406 51.5
FAN20G0680 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.5e-73 280.8 405 50.9
FAN05G5482 Fragaria x ananassa HOM05D006804 ORTHO05D009450 3.3e-73 279.6 405 50.6
FAN09G3680 Fragaria x ananassa HOM05D006804 ORTHO05D009450 9.5e-73 278.1 405 48.4
FAN21G1214 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.2e-72 277.7 402 50.5
FAN14G2659 Fragaria x ananassa HOM05D006804 ORTHO05D009450 2.3e-71 273.5 304 66.4
FAN09G0760 Fragaria x ananassa HOM05D006804 ORTHO05D009450 6.4e-69 265.4 238 65.1
FAN08G2017 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.2e-67 261.2 244 62.3
FAN14G1936 Fragaria x ananassa HOM05D006804 ORTHO05D009450 6.8e-63 245.4 283 50.9
FAN06G2790 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.5e-62 244.2 235 60.0
FAN27G1138 Fragaria x ananassa HOM05D006804 ORTHO05D009450 3.4e-62 243.0 380 47.9
FAN06G3191 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.7e-61 240.7 284 50.7
FAN12G3488 Fragaria x ananassa HOM05D006804 ORTHO05D009450 3.8e-61 239.6 236 60.2
FAN13G1124 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.4e-60 237.7 231 60.6
FAN06G0655 Fragaria x ananassa HOM05D006804 ORTHO05D009450 4.6e-59 232.6 226 59.3
FvH4_6g40561 Fragaria vesca HOM05D006804 ORTHO05D009450 8.7e-58 228.4 128 89.1
FAN19G1697 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.1e-55 221.5 146 77.4
FvH4_7g11472 Fragaria vesca HOM05D006804 ORTHO05D009450 1.1e-52 211.5 194 60.8
FAN08G0475 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.3e-50 204.5 145 77.2
FAN14G4378 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.3e-48 198.0 230 52.2
FAN24G3086 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.3e-48 198.0 249 46.6
FAN27G1821 Fragaria x ananassa HOM05D006804 ORTHO05D009450 3.6e-48 196.4 243 50.6
FAN08G2669 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.4e-47 194.5 125 81.6
FAN07G2158 Fragaria x ananassa HOM05D006804 ORTHO05D009450 6.9e-47 192.2 242 46.3
FAN09G4434 Fragaria x ananassa HOM05D006804 ORTHO05D009450 9.0e-47 191.8 134 75.4
FAN03G1118 Fragaria x ananassa HOM05D006804 ORTHO05D009450 9.3e-44 181.8 183 60.1
FAN10G2403 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.2e-43 181.4 292 44.2
FAN06G2981 Fragaria x ananassa HOM05D006804 ORTHO05D012876 3.5e-43 179.9 89 93.3
FvH4_1g02381 Fragaria vesca HOM05D006804 ORTHO05D009450 6.0e-43 179.1 118 81.4
FAN10G3883 Fragaria x ananassa HOM05D006804 ORTHO05D000875 7.9e-43 178.7 196 57.1
FAN17G1860 Fragaria x ananassa HOM05D006804 ORTHO05D009450 2.3e-42 177.2 179 48.6
FvH4_4g35743 Fragaria vesca HOM05D006804 ORTHO05D009450 3.0e-42 176.8 231 55.0
FAN06G2646 Fragaria x ananassa HOM05D006804 ORTHO05D012876 1.1e-41 174.9 89 92.1
FAN19G1250 Fragaria x ananassa HOM05D006804 ORTHO05D009450 4.0e-39 166.4 231 58.0
FvH4_7g17530 Fragaria vesca HOM05D006804 ORTHO05D009450 5.8e-38 162.5 231 53.2
FAN18G3817 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.1e-36 158.3 197 51.8
FAN11G0245 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.9e-36 157.5 155 83.9
FAN05G3518 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.2e-35 154.8 197 62.9
RcHm_v2.0_Chr6g0254691 Rosa chinensis HOM05D006804 ORTHO05D009450 2.7e-35 153.7 231 40.7
FvH4_1g19463 Fragaria vesca HOM05D006804 ORTHO05D009450 3.5e-35 153.3 231 51.5
FAN08G0754 Fragaria x ananassa HOM05D006804 ORTHO05D009450 3.0e-34 150.2 90 90.0
FAN05G3801 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.1e-33 148.3 180 52.2
FAN24G3098 Fragaria x ananassa HOM05D006804 ORTHO05D046113 1.5e-33 147.9 103 75.7
FvH4_2g18491 Fragaria vesca HOM05D006804 ORTHO05D046113 2.1e-32 144.1 103 73.8
FAN14G4310 Fragaria x ananassa HOM05D006804 ORTHO05D009450 4.8e-32 142.9 152 69.1
FAN10G1207 Fragaria x ananassa HOM05D006804 ORTHO05D009450 5.3e-31 139.4 147 55.8
FvH4_3g19631 Fragaria vesca HOM05D006804 ORTHO05D009450 7.6e-30 135.6 107 58.9
FAN19G2438 Fragaria x ananassa HOM05D006804 ORTHO05D009450 7.6e-30 135.6 196 43.4
FAN19G1696 Fragaria x ananassa HOM05D000167 ORTHO05D000465 1.0e-29 135.2 96 62.5
FAN09G4004 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.8e-26 124.4 235 38.3
FAN19G2981 Fragaria x ananassa HOM05D006804 ORTHO05D009450 4.1e-23 113.2 127 74.8
FAN05G0093 Fragaria x ananassa HOM05D006804 ORTHO05D009450 9.0e-23 112.1 71 80.3
FAN10G2004 Fragaria x ananassa HOM05D006804 ORTHO05D009450 2.6e-22 110.5 289 31.8
FAN08G3456 Fragaria x ananassa HOM05D006804 ORTHO05D200448 1.4e-20 104.8 147 48.3
FAN09G1587 Fragaria x ananassa HOM05D006804 ORTHO05D009450 4.2e-20 103.2 73 74.0
FAN01G1964 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.2e-19 101.7 85 64.7
FAN13G1477 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.6e-19 101.3 189 35.4
FAN08G1524 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.0e-18 98.6 139 43.9
FAN07G0529 Fragaria x ananassa HOM05D006804 ORTHO05D009450 8.8e-18 95.5 194 37.1
FAN04G1830 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.1e-17 95.1 107 51.4
FvH4_1g28433 Fragaria vesca HOM05D006804 ORTHO05D009450 2.5e-17 94.0 185 36.2
FvH4_2g27711 Fragaria vesca HOM05D006804 ORTHO05D009450 3.3e-17 93.6 213 35.2
FAN14G2458 Fragaria x ananassa HOM05D006804 ORTHO05D009450 4.3e-17 93.2 119 49.6
RcHm_v2.0_Chr5g0011791 Rosa chinensis HOM05D006804 ORTHO05D009450 3.7e-16 90.1 141 39.7
FvH4_2g16143 Fragaria vesca HOM05D006804 ORTHO05D009450 2.4e-15 87.4 75 65.3
FAN04G1267 Fragaria x ananassa HOM05D006804 ORTHO05D200694 2.0e-14 84.3 49 89.8
FAN06G2345 Fragaria x ananassa HOM05D006804 ORTHO05D009450 2.6e-14 84.0 55 81.8
FAN08G1119 Fragaria x ananassa HOM05D025685 ORTHO05D204485 2.6e-14 84.0 42 88.1
RcHm_v2.0_Chr1g0328341 Rosa chinensis HOM05D006804 ORTHO05D009450 5.9e-14 82.8 95 45.3
FAN17G2066 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.7e-13 81.3 151 53.6
RcHm_v2.0_Chr5g0060631 Rosa chinensis HOM05D006804 ORTHO05D009450 2.2e-13 80.9 158 39.2
FAN18G1137 Fragaria x ananassa HOM05D006804 ORTHO05D205673 1.6e-11 74.7 145 62.1
FvH4_6g39781 Fragaria vesca HOM05D006804 ORTHO05D045977 2.1e-11 74.3 53 67.9
FAN07G2355 Fragaria x ananassa HOM05D006804 ORTHO05D009450 2.7e-11 73.9 153 54.2
RcHm_v2.0_Chr5g0020991 Rosa chinensis HOM05D006804 ORTHO05D009450 7.9e-11 72.4 52 59.6
FAN22G0012 Fragaria x ananassa HOM05D006804 ORTHO05D199913 1.0e-10 72.0 65 63.1
FAN10G1941 Fragaria x ananassa HOM05D006804 ORTHO05D009450 3.0e-10 70.5 56 60.7
FAN03G0767 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.9e-10 70.1 297 26.9
FAN03G0943 Fragaria x ananassa HOM05D008328 ORTHO05D003172 3.9e-10 70.1 301 27.9
FAN24G1232 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.9e-10 70.1 297 26.9
FAN26G1201 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.9e-10 70.1 297 26.9
FAN14G5009 Fragaria x ananassa HOM05D006804 ORTHO05D045977 5.1e-10 69.7 53 64.2
FAN24G3209 Fragaria x ananassa HOM05D006804 ORTHO05D009450 5.1e-10 69.7 131 47.3
FAN23G2667 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.7e-10 69.3 262 28.2
FAN17G2131 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.1e-09 68.6 297 26.6
FAN25G0014 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-09 68.2 264 26.1
FAN04G2765 Fragaria x ananassa HOM05D008328 ORTHO05D003172 2.0e-09 67.8 301 27.6
FAN04G2813 Fragaria x ananassa HOM05D008328 ORTHO05D003172 2.0e-09 67.8 301 27.6
FAN05G3353 Fragaria x ananassa HOM05D008328 ORTHO05D003172 2.0e-09 67.8 301 27.6
FAN09G0970 Fragaria x ananassa HOM05D008328 ORTHO05D003172 2.0e-09 67.8 301 27.6
FAN10G4036 Fragaria x ananassa HOM05D008328 ORTHO05D003172 2.0e-09 67.8 301 27.6
RcHm_v2.0_Chr1g0344801 Rosa chinensis HOM05D006804 ORTHO05D009450 2.0e-09 67.8 52 55.8
FAN14G4484 Fragaria x ananassa HOM05D008328 ORTHO05D003172 2.6e-09 67.4 301 27.6
FAN10G2421 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.3e-09 67.0 291 25.8
FAN15G3561 Fragaria x ananassa HOM05D008328 ORTHO05D003172 3.3e-09 67.0 301 27.6
FAN01G2695 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.4e-09 66.6 291 25.8
FAN11G1400 Fragaria x ananassa HOM05D008328 ORTHO05D003172 4.4e-09 66.6 301 27.6
FAN17G2411 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.4e-09 66.6 251 22.7
FAN18G2686 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.4e-09 66.6 274 22.3
FvH4_5g15962 Fragaria vesca HOM05D003861 ORTHO05D003172 5.7e-09 66.2 288 25.0
FAN04G1029 Fragaria x ananassa HOM05D008328 ORTHO05D003172 7.4e-09 65.9 301 27.2
FAN07G1974 Fragaria x ananassa HOM05D008328 ORTHO05D003172 7.4e-09 65.9 301 27.2
FAN03G1903 Fragaria x ananassa HOM05D008328 ORTHO05D003172 9.7e-09 65.5 301 27.2
FAN12G0494 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.7e-09 65.5 283 24.4
FAN23G2374 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.7e-09 65.5 249 26.9
FAN27G0540 Fragaria x ananassa HOM05D008328 ORTHO05D003172 9.7e-09 65.5 301 27.6
FAN19G2630 Fragaria x ananassa HOM05D008328 ORTHO05D003172 2.2e-08 64.3 301 27.6
FAN03G2119 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.8e-08 63.9 262 22.1
FAN04G0957 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.8e-08 63.9 283 24.0
FAN05G0636 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.8e-08 63.9 283 24.0
FAN09G1343 Fragaria x ananassa HOM05D006804 ORTHO05D209820 2.8e-08 63.9 38 78.9
FAN11G3391 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.8e-08 63.9 283 24.0
FAN18G3027 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.8e-08 63.9 250 27.2
FAN19G1774 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.8e-08 63.9 283 24.0
FAN24G3411 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.7e-08 63.5 283 24.0
FAN08G0030 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.8e-08 63.2 283 24.0
FAN08G0306 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.8e-08 63.2 283 24.0
FAN18G3238 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.8e-08 63.2 283 24.0
FAN19G2410 Fragaria x ananassa HOM05D008328 ORTHO05D003172 4.8e-08 63.2 228 29.4
FAN20G1736 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.8e-08 63.2 283 24.0
FAN20G2009 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.8e-08 63.2 283 24.0
FAN26G2524 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.8e-08 63.2 283 24.0
RcHm_v2.0_Chr7g0200361 Rosa chinensis HOM05D003861 ORTHO05D003172 4.8e-08 63.2 282 25.9
FAN06G2497 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.3e-08 62.8 283 24.0
FvH4_5g34730 Fragaria vesca HOM05D003861 ORTHO05D003172 8.2e-08 62.4 260 26.9
FAN02G3772 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.1e-07 62.0 205 28.3
FAN05G5297 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.1e-07 62.0 285 24.6
FAN08G2861 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.1e-07 62.0 308 27.6
FAN21G1384 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.1e-07 62.0 283 23.7
FAN04G0487 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.4e-07 61.6 308 27.6
FAN06G2077 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-07 61.6 235 26.0
FAN09G2774 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.4e-07 61.6 282 27.7
FAN14G1330 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.4e-07 61.6 239 29.7
FAN25G3807 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-07 61.6 235 26.0
MD02G1308300 Malus domestica HOM05D005145 ORTHO05D006062 1.4e-07 61.6 89 37.1
Aqoxy1G02949 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 1.8e-07 61.2 113 29.2
FvH4_7g02563 Fragaria vesca HOM05D006804 ORTHO05D009450 1.8e-07 61.2 55 56.4
FAN06G0466 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.8e-07 61.2 268 26.1
FAN14G0103 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.8e-07 61.2 295 25.8
FAN20G3207 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.8e-07 61.2 235 26.0
CiPaw.01G179900 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.4e-07 60.8 166 25.9
FAN18G0257 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.4e-07 60.8 283 23.7
FAN28G1231 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.4e-07 60.8 283 23.7
FAN05G2260 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.1e-07 60.5 285 25.6
FAN06G0363 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.3e-07 59.7 243 28.8
FAN16G3351 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.1e-07 58.9 258 27.1
FAN12G4080 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-06 58.5 304 26.0
FAN14G0954 Fragaria x ananassa HOM05D001576 ORTHO05D000401 1.2e-06 58.5 145 29.0
Aqoxy6G02363 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 2.6e-06 57.4 113 28.3
FAN05G4694 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.5e-06 57.0 193 28.5
Aqoxy3G02110 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 5.9e-06 56.2 113 28.3
FAN20G0681 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.9e-06 56.2 94 34.0
FvH4_4g12252 Fragaria vesca HOM05D003861 ORTHO05D003172 7.7e-06 55.8 192 27.1
MD08G1183800 Malus domestica HOM05D019378 ORTHO05D003172 7.7e-06 55.8 263 23.6
SGA_v2.0_scaffold218G42484 Striga asiatica HOM05D008413 ORTHO05D000401 7.7e-06 55.8 301 24.3


User provided reference genes

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