Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G4210 Fragaria x ananassa HOM05D004991 ORTHO05D020246 1.9e-133 479.2 236 100.0
FAN06G0285 Fragaria x ananassa HOM05D004991 ORTHO05D020246 4.4e-111 404.8 255 82.7
FvH4_7g26640 Fragaria vesca HOM05D004991 ORTHO05D006690 9.5e-29 131.3 97 72.2
MD07G1241200 Malus domestica HOM05D004991 ORTHO05D006690 2.6e-26 123.2 98 68.4
RcHm_v2.0_Chr1g0373261 Rosa chinensis HOM05D004991 ORTHO05D006690 9.8e-26 121.3 98 67.3
Lalb_Chr21g0312591 Lupinus albus HOM05D004991 ORTHO05D006690 7.0e-24 115.2 89 68.5
FAN03G3358 Fragaria x ananassa HOM05D004991 ORTHO05D006690 9.2e-24 114.8 97 66.0
Prupe.2G270300 Prunus persica HOM05D004991 ORTHO05D006690 2.0e-23 113.6 98 64.3
Medtr1g072830 Medicago truncatula HOM05D004991 ORTHO05D006690 2.7e-23 113.2 106 59.4
VMungo0720G1976 Vigna mungo HOM05D004991 ORTHO05D006690 3.5e-23 112.8 89 68.5
Haze_22225 Corylus avellana HOM05D004991 ORTHO05D006690 4.6e-23 112.5 78 71.8
FAN06G1714 Fragaria x ananassa HOM05D004991 ORTHO05D006690 4.6e-23 112.5 73 78.1
CiPaw.07G183100 Carya illinoinensis HOM05D004991 ORTHO05D006690 6.0e-23 112.1 79 74.7
Lalb_Chr06g0169601 Lupinus albus HOM05D004991 ORTHO05D006690 6.0e-23 112.1 98 62.2
PSO063G0983 Papaver somniferum HOM05D004991 ORTHO05D006690 6.0e-23 112.1 83 69.9
PSO782G2232 Papaver somniferum HOM05D004991 ORTHO05D006690 6.0e-23 112.1 83 69.9
Manes.14G041100 Manihot esculenta HOM05D004991 ORTHO05D006690 7.8e-23 111.7 83 68.7
Sabra15G0133000 Salix brachista HOM05D004991 ORTHO05D006690 1.3e-22 110.9 83 67.5
Cc00_g13040 Coffea canephora HOM05D004991 ORTHO05D006690 1.7e-22 110.5 94 67.0
Lsat_1_v5_gn_9_58401 Lactuca sativa HOM05D004991 ORTHO05D006690 1.7e-22 110.5 94 67.0
Potri.015G111200 Populus trichocarpa HOM05D004991 ORTHO05D006690 1.7e-22 110.5 83 66.3
Cfa013604 Carpinus fangiana HOM05D004991 ORTHO05D006690 2.3e-22 110.2 77 71.4
Phvul.L001785 Phaseolus vulgaris HOM05D004991 ORTHO05D006690 2.3e-22 110.2 92 66.3
Potri.012G113700 Populus trichocarpa HOM05D004991 ORTHO05D006690 2.3e-22 110.2 93 61.3
Ca_09787_v3 Cicer arietinum L. HOM05D004991 ORTHO05D006690 3.0e-22 109.8 83 67.5
Lj5g0020821 Lotus japonicus HOM05D004991 ORTHO05D006690 5.0e-22 109.0 91 63.7
Thecc.03G145300 Theobroma cacao HOM05D004991 ORTHO05D006690 5.0e-22 109.0 83 69.9
Nn1g00766 Nelumbo nucifera HOM05D004991 ORTHO05D006690 6.6e-22 108.6 94 66.0
EL10Ac5g12571 Beta vulgaris HOM05D004991 ORTHO05D006690 8.6e-22 108.2 76 73.7
Ciclev10031244m.g Citrus clementina HOM05D004991 ORTHO05D006690 8.6e-22 108.2 74 74.3
Lj8A49G38 Lonicera japonica HOM05D004991 ORTHO05D006690 8.6e-22 108.2 94 64.9
Psat6g140160 Pisum sativum HOM05D004991 ORTHO05D006690 1.1e-21 107.8 106 58.5
Rhsim09G0188500 Rhododendron simsii HOM05D004991 ORTHO05D006690 1.1e-21 107.8 95 64.2
Atru.chr6.1976 Acer truncatum HOM05D004991 ORTHO05D006690 1.5e-21 107.5 75 73.3
CAN.G1016.3 Capsicum annuum HOM05D004991 ORTHO05D006690 1.5e-21 107.5 94 66.0
COL.COLO4_37308 Corchorus olitorius HOM05D004991 ORTHO05D006690 1.5e-21 107.5 83 68.7
HanXRQChr09g0252201 Helianthus annuus HOM05D004991 ORTHO05D006690 1.5e-21 107.5 83 67.5
Dinv16894 Davidia involucrata HOM05D004991 ORTHO05D006690 1.9e-21 107.1 83 69.9
Glyma.10G191600 Glycine max HOM05D004991 ORTHO05D006690 1.9e-21 107.1 89 66.3
Manes.06G129800 Manihot esculenta HOM05D004991 ORTHO05D006690 1.9e-21 107.1 95 62.1
Ah.12g058550 Amaranthus hybridus HOM05D004991 ORTHO05D006690 3.3e-21 106.3 85 64.7
ECA232G0310 Erigeron canadensis HOM05D004991 ORTHO05D006690 3.3e-21 106.3 83 68.7
Peaxi162Scf00073g01724 Petunia axillaris HOM05D004991 ORTHO05D006690 3.3e-21 106.3 83 69.9
Sabra12G0082800 Salix brachista HOM05D004991 ORTHO05D006690 3.3e-21 106.3 93 59.1
Sopen03g024840 Solanum pennellii HOM05D004991 ORTHO05D006690 3.3e-21 106.3 102 60.8
Sopen06g002160 Solanum pennellii HOM05D004991 ORTHO05D006690 3.3e-21 106.3 102 60.8
PGSC0003DMG400008342 Solanum tuberosum HOM05D004991 ORTHO05D006690 3.3e-21 106.3 102 60.8
TAR375G0717 Trochodendron aralioides HOM05D004991 ORTHO05D006690 3.3e-21 106.3 94 63.8
DCAR_014644 Daucus carota HOM05D004991 ORTHO05D006690 4.3e-21 105.9 94 62.8
GSVIVG01024473001 Vitis vinifera HOM05D004991 ORTHO05D006690 4.3e-21 105.9 83 68.7
Actinidia01035 Actinidia chinensis HOM05D004991 ORTHO05D006690 5.6e-21 105.5 83 67.5
Eucgr.A02933 Eucalyptus grandis HOM05D004991 ORTHO05D006690 5.6e-21 105.5 75 70.7
FvH4_4g09270 Fragaria vesca HOM05D024948 ORTHO05D020246 5.6e-21 105.5 74 77.0
Gorai.003G111000 Gossypium raimondii HOM05D004991 ORTHO05D006690 5.6e-21 105.5 119 52.1
FvH4_5g09510 Fragaria vesca HOM05D024948 ORTHO05D020246 7.3e-21 105.1 116 56.9
Gohir.A09G248400 Gossypium hirsutum HOM05D004991 ORTHO05D006690 7.3e-21 105.1 83 67.5
Gorai.006G273700 Gossypium raimondii HOM05D004991 ORTHO05D006690 7.3e-21 105.1 83 67.5
arahy.Tifrunner.gnm1.ann1.A0K4XE Arachis hypogaea HOM05D004991 ORTHO05D006690 9.5e-21 104.8 74 68.9
arahy.Tifrunner.gnm1.ann1.GMTF4T Arachis hypogaea HOM05D004991 ORTHO05D006690 9.5e-21 104.8 74 68.9
Gohir.A03G061000 Gossypium hirsutum HOM05D004991 ORTHO05D006690 9.5e-21 104.8 95 64.2
Hma1.2p1_0502F.1_g167940 Hydrangea macrophylla HOM05D004991 ORTHO05D006690 9.5e-21 104.8 94 63.8
Hma1.2p1_0502F.1_g167960 Hydrangea macrophylla HOM05D004991 ORTHO05D035817 9.5e-21 104.8 94 63.8
Hund14297 Selenicereus undatus HOM05D004991 ORTHO05D006690 9.5e-21 104.8 99 59.6
Dinv34534 Davidia involucrata HOM05D004991 ORTHO05D006690 1.2e-20 104.4 94 63.8
PGR042G3269 Punica granatum HOM05D004991 ORTHO05D006690 1.2e-20 104.4 76 68.4
Actinidia31763 Actinidia chinensis HOM05D004991 ORTHO05D006690 1.6e-20 104.0 94 62.8
CANSAT56G0842 Cannabis sativa HOM05D004991 ORTHO05D006690 1.6e-20 104.0 98 60.2
Glyma.20G198600 Glycine max HOM05D004991 ORTHO05D006690 2.1e-20 103.6 89 65.2
Gohir.D03G105000 Gossypium hirsutum HOM05D004991 ORTHO05D006690 2.1e-20 103.6 83 67.5
CDE11G0390 Ceratophyllum demersum HOM05D004991 ORTHO05D006690 2.8e-20 103.2 83 66.3
AUR62030431 Chenopodium quinoa HOM05D004991 ORTHO05D006690 2.8e-20 103.2 101 60.4
AUR62010468 Chenopodium quinoa HOM05D004991 ORTHO05D006690 3.6e-20 102.8 80 68.8
Migut.F00542 Erythranthe guttata HOM05D004991 ORTHO05D006690 3.6e-20 102.8 96 59.4
Sc17g0004550 Simmondsia chinensis HOM05D004991 ORTHO05D006690 3.6e-20 102.8 82 68.3
vmacro09929 Vaccinium macrocarpon HOM05D004991 ORTHO05D006690 3.6e-20 102.8 76 76.3
MELO3C005445.2 Cucumis melo HOM05D004991 ORTHO05D006690 4.7e-20 102.4 83 65.1
Duzib068G0066 Durio zibethinus HOM05D004991 ORTHO05D006690 4.7e-20 102.4 126 50.0
CDE02G4339 Ceratophyllum demersum HOM05D004991 ORTHO05D006690 6.2e-20 102.1 94 61.7
FAN23G2619 Fragaria x ananassa HOM05D024948 ORTHO05D020246 6.2e-20 102.1 72 77.8
MBI04_g13852_MAGBIO Magnolia biondii HOM05D004991 ORTHO05D006690 6.2e-20 102.1 75 76.0
TWI14G0627 Tripterygium wilfordii HOM05D004991 ORTHO05D006690 6.2e-20 102.1 83 66.3
Aqoxy180s003 Aquilegia oxysepala HOM05D004991 ORTHO05D006690 8.1e-20 101.7 83 66.3
Aqoxy3G02658 Aquilegia oxysepala HOM05D004991 ORTHO05D006690 8.1e-20 101.7 83 66.3
CsaV3_5G005110 Cucumis sativus L. HOM05D004991 ORTHO05D006690 8.1e-20 101.7 75 69.3
TWI39G0803 Tripterygium wilfordii HOM05D004991 ORTHO05D006690 8.1e-20 101.7 83 66.3
QL09p027386 Quercus lobata HOM05D004991 ORTHO05D006690 1.4e-19 100.9 79 70.9
Duzib084G1450 Durio zibethinus HOM05D004991 ORTHO05D006690 1.8e-19 100.5 83 66.3
SGA_v2.0_scaffold60G20847 Striga asiatica HOM05D004991 ORTHO05D006690 1.8e-19 100.5 58 82.8
Duzib205G0755 Durio zibethinus HOM05D004991 ORTHO05D006690 2.3e-19 100.1 83 66.3
Gohir.D07G049050 Gossypium hirsutum HOM05D004991 ORTHO05D006690 2.3e-19 100.1 83 66.3
Gorai.001G052200 Gossypium raimondii HOM05D004991 ORTHO05D006690 2.3e-19 100.1 83 66.3
CSS0009087 Camellia sinensis var. sinensis HOM05D004991 ORTHO05D020246 3.1e-19 99.8 55 92.7
Nitab4.5_0002293g0040 Nicotiana tabacum HOM05D004991 ORTHO05D006690 3.1e-19 99.8 64 81.2
MSTRG.27231 Avicennia marina HOM05D004991 ORTHO05D006690 4.0e-19 99.4 95 60.0
BcaB08g35470 Brassica carinata HOM05D004991 ORTHO05D006690 6.8e-19 98.6 83 66.3
BcaC01g06078 Brassica carinata HOM05D004991 ORTHO05D006690 6.8e-19 98.6 97 60.8
BcaC01g06096 Brassica carinata HOM05D004991 ORTHO05D006690 6.8e-19 98.6 83 67.5
C03p19160 Brassica napus HOM05D004991 ORTHO05D006690 6.8e-19 98.6 83 67.5
BolC3t14304H Brassica oleracea HOM05D004991 ORTHO05D006690 6.8e-19 98.6 83 67.5
ClCG01G004880 Citrullus lanatus HOM05D004991 ORTHO05D006690 6.8e-19 98.6 56 87.5
unitig_46.g18758 Utricularia gibba HOM05D004991 ORTHO05D006690 6.8e-19 98.6 75 65.3
Glyma.02G174600 Glycine max HOM05D004991 ORTHO05D006690 1.2e-18 97.8 78 65.4
Sed0023274 Sechium edule HOM05D004991 ORTHO05D006690 1.2e-18 97.8 78 65.4
A03p16270 Brassica napus HOM05D004991 ORTHO05D006690 2.6e-18 96.7 83 66.3
BraA03t10918Z Brassica rapa HOM05D004991 ORTHO05D006690 2.6e-18 96.7 83 66.3
Hund11017 Selenicereus undatus HOM05D004991 ORTHO05D006690 2.6e-18 96.7 78 67.9
AL8G25410 Arabidopsis lyrata HOM05D004991 ORTHO05D006690 3.4e-18 96.3 83 66.3
AT5G51150 Arabidopsis thaliana HOM05D004991 ORTHO05D006690 3.4e-18 96.3 83 66.3
A10p07970 Brassica napus HOM05D004991 ORTHO05D006690 3.4e-18 96.3 83 66.3
BraSC35t46003Z Brassica rapa HOM05D004991 ORTHO05D006690 3.4e-18 96.3 83 66.3
Carub.0008s1119 Capsella rubella HOM05D004991 ORTHO05D006690 3.4e-18 96.3 83 66.3
Sp6g13360 Schrenkiella parvula HOM05D004991 ORTHO05D006690 3.4e-18 96.3 83 66.3
THA.LOC104811541 Tarenaya hassleriana HOM05D004991 ORTHO05D006690 4.4e-18 95.9 83 66.3
Thhalv10013222m.g Eutrema salsugineum HOM05D004991 ORTHO05D006690 7.5e-18 95.1 72 72.2
BcaC04g20727 Brassica carinata HOM05D004991 ORTHO05D006690 9.8e-18 94.7 83 65.1
C09p39840 Brassica napus HOM05D004991 ORTHO05D006690 9.8e-18 94.7 83 65.1
BolC9t56883H Brassica oleracea HOM05D004991 ORTHO05D006690 9.8e-18 94.7 83 65.1
FAN06G2940 Fragaria x ananassa HOM05D004991 ORTHO05D035817 9.8e-18 94.7 57 84.2
FAN06G3183 Fragaria x ananassa HOM05D004991 ORTHO05D035817 9.8e-18 94.7 57 84.2
Oeu030873.1 Olea europaea HOM05D004991 ORTHO05D006690 9.8e-18 94.7 64 78.1
Cpa.g.sc13.221 Carica papaya HOM05D004991 ORTHO05D006690 1.3e-17 94.4 83 65.1
Aa31LG3G7660 Aethionema arabicum HOM05D004991 ORTHO05D006690 1.7e-17 94.0 76 68.4
FAN12G4051 Fragaria x ananassa HOM05D024948 ORTHO05D020246 2.9e-17 93.2 143 44.8
ATR0665G298 Amborella trichopoda HOM05D004991 ORTHO05D006690 3.7e-17 92.8 87 57.5
Sed0019867 Sechium edule HOM05D004991 ORTHO05D006690 4.9e-17 92.4 73 65.8
Sed0002589 Sechium edule HOM05D004991 ORTHO05D006690 1.9e-16 90.5 72 66.7
Zm00001eb322080 Zea mays HOM05D004991 ORTHO05D006690 1.2e-15 87.8 72 65.3
Zm00001eb322110 Zea mays HOM05D004991 ORTHO05D006690 1.2e-15 87.8 72 65.3
AagrBONN_evm.TU.Sc2ySwM_344.798 Anthoceros agrestis HOM05D004991 ORTHO05D006690 8.6e-14 81.6 81 58.0
Mapoly0103s0064 Marchantia polymorpha HOM05D004991 ORTHO05D006690 8.6e-14 81.6 75 53.3
Mapoly0175s0021 Marchantia polymorpha HOM05D004991 ORTHO05D006690 1.9e-13 80.5 75 53.3
Mapoly0001s0004 Marchantia polymorpha HOM05D004991 ORTHO05D006690 7.3e-13 78.6 75 52.0
SMO364G0598 Selaginella moellendorffii HOM05D004991 ORTHO05D006690 2.8e-12 76.6 75 52.0
Pp3c2_28300 Physcomitrium patens HOM05D004991 ORTHO05D006690 4.7e-12 75.9 80 48.8
Pp3c1_10120 Physcomitrium patens HOM05D004991 ORTHO05D006690 1.1e-11 74.7 75 49.3
CBR_g55399 Chara braunii HOM05D004991 ORTHO05D006690 1.1e-08 64.7 76 46.1


User provided reference genes

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