Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G4209 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.8e-75 284.6 133 100.0
FAN06G2592 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.2e-34 148.7 68 98.5
RcHm_v2.0_Chr1g0348421 Rosa chinensis HOM05D000005 ORTHO05D000012 5.4e-13 78.2 78 42.3
RcHm_v2.0_Chr1g0348431 Rosa chinensis HOM05D000005 ORTHO05D000012 7.0e-13 77.8 51 56.9
FAN03G2198 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.9e-11 72.0 51 52.9
FvH4_7g10520 Fragaria vesca HOM05D000005 ORTHO05D000012 8.6e-11 70.9 78 39.7
FvH4_7g10510 Fragaria vesca HOM05D000005 ORTHO05D000012 9.5e-10 67.4 53 49.1
FAN06G4048 Fragaria x ananassa HOM05D000005 ORTHO05D000012 9.5e-10 67.4 53 49.1
RcHm_v2.0_Chr1g0348361 Rosa chinensis HOM05D000005 ORTHO05D000012 1.2e-09 67.0 69 49.3
CSS0009639 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.6e-09 66.6 67 50.7
RcHm_v2.0_Chr1g0348311 Rosa chinensis HOM05D000005 ORTHO05D000012 1.6e-09 66.6 69 49.3
RcHm_v2.0_Chr1g0348371 Rosa chinensis HOM05D000005 ORTHO05D000012 8.0e-09 64.3 70 42.9
Dinv38459 Davidia involucrata HOM05D000005 ORTHO05D000012 1.4e-08 63.5 52 53.8
Dinv38457 Davidia involucrata HOM05D010983 ORTHO05D000012 4.0e-08 62.0 53 52.8
Lj3C725T19 Lonicera japonica HOM05D000005 ORTHO05D000012 4.0e-08 62.0 87 41.4
Lj3P725T45 Lonicera japonica HOM05D000005 ORTHO05D000012 5.2e-08 61.6 45 62.2
RcHm_v2.0_Chr1g0346831 Rosa chinensis HOM05D000005 ORTHO05D000012 6.8e-08 61.2 48 58.3
MD05G1152200 Malus domestica HOM05D000005 ORTHO05D000012 8.9e-08 60.8 56 51.8
CSS0022340 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.2e-07 60.5 49 51.0
Prupe.8G185200 Prunus persica HOM05D000005 ORTHO05D000012 1.2e-07 60.5 56 53.6
RcHm_v2.0_Chr1g0348381 Rosa chinensis HOM05D000005 ORTHO05D000012 1.2e-07 60.5 126 30.2
Dinv29687 Davidia involucrata HOM05D000005 ORTHO05D000012 2.6e-07 59.3 54 51.9
Dinv00401 Davidia involucrata HOM05D000005 ORTHO05D000012 3.4e-07 58.9 53 49.1
Dinv29690 Davidia involucrata HOM05D000005 ORTHO05D000012 3.4e-07 58.9 53 49.1
Dinv38460 Davidia involucrata HOM05D000005 ORTHO05D000012 3.4e-07 58.9 55 47.3
RcHm_v2.0_Chr1g0348411 Rosa chinensis HOM05D000005 ORTHO05D000012 3.4e-07 58.9 126 30.2
MD05G1140100 Malus domestica HOM05D000005 ORTHO05D000012 4.4e-07 58.5 60 48.3
Dinv29645 Davidia involucrata HOM05D000005 ORTHO05D000012 5.8e-07 58.2 54 55.6
Dinv38462 Davidia involucrata HOM05D000005 ORTHO05D000012 5.8e-07 58.2 54 51.9
CSS0037441 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 9.8e-07 57.4 49 46.9
Dinv29646 Davidia involucrata HOM05D000005 ORTHO05D000012 9.8e-07 57.4 58 51.7
Dinv38450 Davidia involucrata HOM05D000005 ORTHO05D000012 1.3e-06 57.0 46 58.7
CSS0031517 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.7e-06 56.6 49 49.0
CSS0034467 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.7e-06 56.6 51 51.0
MD07G1112300 Malus domestica HOM05D000005 ORTHO05D000012 2.2e-06 56.2 52 50.0
MD11G1112400 Malus domestica HOM05D000005 ORTHO05D000012 2.2e-06 56.2 55 47.3
Dinv00400 Davidia involucrata HOM05D000005 ORTHO05D000012 3.7e-06 55.5 54 51.9
Prupe.8G184900 Prunus persica HOM05D000005 ORTHO05D000012 3.7e-06 55.5 44 52.3
vmacro19819 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 4.9e-06 55.1 56 50.0
CSS0016030 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 6.4e-06 54.7 49 46.9
CSS0020094 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 6.4e-06 54.7 49 49.0
CSS0019233 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000294 8.3e-06 54.3 49 51.0
Dinv38461 Davidia involucrata HOM05D000005 ORTHO05D000012 8.3e-06 54.3 83 39.8


User provided reference genes

Program Settings