Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 3.6e-205 718.0 360 100.0
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 4.0e-196 688.0 364 96.2
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 2.1e-192 675.6 341 99.1
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.4e-188 662.9 360 93.3
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 1.9e-169 599.4 357 86.0
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 6.0e-168 594.3 309 97.1
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 3.8e-146 521.9 360 73.9
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 1.0e-143 513.8 361 72.6
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 2.9e-138 495.7 352 73.0
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 1.5e-126 456.8 358 64.0
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 1.8e-124 449.9 363 64.5
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 1.8e-124 449.9 361 62.9
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 6.5e-122 441.4 369 59.3
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 5.5e-121 438.3 356 62.6
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 2.3e-119 433.0 366 62.3
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 2.6e-118 429.5 356 61.8
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 4.4e-118 428.7 361 60.9
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 7.5e-118 427.9 356 62.1
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 1.3e-117 427.2 355 60.6
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 3.5e-115 419.1 353 59.8
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 4.5e-115 418.7 362 58.8
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 4.5e-115 418.7 351 60.1
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 5.9e-115 418.3 356 59.8
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 2.9e-114 416.0 366 57.9
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 1.1e-113 414.1 361 58.7
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 1.5e-113 413.7 353 60.1
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 1.5e-113 413.7 354 61.6
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 2.5e-113 412.9 366 60.1
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 2.5e-113 412.9 375 58.9
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 1.2e-112 410.6 361 57.9
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 1.6e-112 410.2 363 58.7
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 1.4e-111 407.1 342 60.8
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 1.4e-111 407.1 360 59.4
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 5.2e-111 405.2 363 58.1
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 2.0e-110 403.3 357 56.0
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 1.7e-109 400.2 357 55.7
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 1.1e-108 397.5 359 55.4
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 1.4e-108 397.1 340 59.4
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 1.8e-108 396.7 325 61.8
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 4.1e-108 395.6 334 58.1
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 1.6e-107 393.7 358 55.0
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 2.0e-107 393.3 367 55.3
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 7.8e-107 391.3 354 55.6
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 1.0e-106 391.0 366 53.8
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 1.3e-106 390.6 353 56.7
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 2.3e-106 389.8 358 56.7
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 6.6e-106 388.3 357 57.7
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 8.6e-106 387.9 355 55.8
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 1.1e-105 387.5 355 55.5
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 1.5e-105 387.1 333 59.2
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 4.3e-105 385.6 352 55.7
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 1.2e-104 384.0 360 53.6
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 2.1e-104 383.3 360 53.9
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 3.6e-104 382.5 365 53.4
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 4.7e-104 382.1 353 55.8
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 1.0e-103 380.9 364 54.9
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 3.4e-102 375.9 336 56.5
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 4.4e-102 375.6 360 52.8
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 2.9e-101 372.9 349 53.9
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 1.9e-100 370.2 298 64.1
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 5.0e-98 362.1 362 54.1
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 3.3e-97 359.4 361 53.2
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 4.3e-97 359.0 377 52.3
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 1.2e-96 357.5 370 52.4
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 2.1e-96 356.7 358 52.8
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 8.9e-95 351.3 355 52.7
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 2.0e-94 350.1 355 52.4
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 4.4e-94 349.0 361 53.7
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 7.5e-94 348.2 323 56.3
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 2.9e-93 346.3 340 55.0
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 8.3e-93 344.7 354 53.4
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 1.1e-92 344.4 355 52.4
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 1.4e-92 344.0 298 60.1
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 2.1e-91 340.1 355 51.8
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 5.1e-90 335.5 341 52.8
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 8.6e-90 334.7 366 52.5
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 4.3e-89 332.4 341 52.8
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 4.0e-87 325.9 328 56.4
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 3.2e-84 316.2 339 50.4
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 4.1e-84 315.8 256 61.7
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 1.2e-83 314.3 275 59.6
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 7.8e-83 311.6 290 60.0
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 1.0e-82 311.2 349 47.6
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 3.4e-78 296.2 272 58.5
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 2.2e-77 293.5 330 47.9
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 6.4e-77 292.0 361 47.4
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 8.4e-77 291.6 273 54.9
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 3.2e-76 289.7 273 57.1
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 4.2e-76 289.3 256 55.9
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 7.1e-76 288.5 288 51.7
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 7.1e-76 288.5 271 59.0
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 1.2e-75 287.7 227 65.6
FAN06G2675 Fragaria x ananassa HOM05D005940 ORTHO05D007027 3.4e-70 269.6 230 69.1
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 1.0e-66 258.1 280 53.2
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 3.6e-64 249.6 265 52.8
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 3.4e-62 243.0 330 42.4
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 9.0e-55 218.4 171 62.6
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 1.5e-54 217.6 271 45.4
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 2.0e-54 217.2 354 38.7
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 1.3e-53 214.5 269 49.1
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 1.4e-52 211.1 187 58.8
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 1.1e-47 194.9 351 38.7
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 5.9e-46 189.1 372 33.6
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 7.6e-46 188.7 339 35.7
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 2.5e-44 183.7 337 37.1
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 3.8e-37 159.8 226 43.8
SHI28162 Sapria himalayana HOM05D005940 ORTHO05D007027 1.9e-36 157.5 162 50.0
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 6.1e-35 152.5 244 40.6
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 3.0e-34 150.2 218 46.3
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 6.7e-26 122.5 93 59.1
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 8.8e-26 122.1 438 26.0
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 1.5e-25 121.3 84 61.9
Haze_16941 Corylus avellana HOM05D005940 ORTHO05D007027 1.8e-23 114.4 128 46.1
unitig_46.g18613 Utricularia gibba HOM05D005940 ORTHO05D007027 2.4e-23 114.0 194 36.6
ECA240G2370 Erigeron canadensis HOM05D005940 ORTHO05D007027 5.5e-20 102.8 78 55.1
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 1.4e-18 98.2 91 46.2
TPR.G40057 Trifolium pratense HOM05D005940 ORTHO05D007027 3.3e-17 93.6 65 56.9
SHI28160 Sapria himalayana HOM05D000105 ORTHO05D000023 1.7e-16 91.3 65 73.8
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 1.6e-14 84.7 206 29.6
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 2.0e-14 84.3 216 35.2
CSS0026064 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 8.5e-13 79.0 66 56.1
MCO14G149 Micromonas commoda HOM05D005940 ORTHO05D007027 1.9e-12 77.8 355 26.2
PRCOL_00006890 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 2.6e-09 67.4 287 27.5
PRCOL_00002155 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 4.4e-09 66.6 223 30.0
FAN06G0223 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.7e-08 64.7 29 96.6
HPP92_019693 Vanilla planifolia HOM05D005940 ORTHO05D002769 2.2e-08 64.3 58 56.9
CSS0028355 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 3.7e-08 63.5 38 76.3
Cre01.g033763 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 2.0e-06 57.8 58 53.4
SMO112G0074 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 2.0e-06 57.8 180 30.0


User provided reference genes

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