Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G4133 Fragaria x ananassa HOM05D022263 ORTHO05D000421 2.7e-126 455.3 221 100.0
FAN06G4176 Fragaria x ananassa HOM05D022263 ORTHO05D045688 1.1e-124 449.9 221 99.1
FAN01G2140 Fragaria x ananassa HOM05D022263 ORTHO05D003783 1.6e-118 429.5 221 95.9
FvH4_7g20890 Fragaria vesca HOM05D022263 ORTHO05D045688 2.4e-98 362.5 221 86.0
FAN18G2667 Fragaria x ananassa HOM05D003188 ORTHO05D003602 1.9e-15 87.0 85 58.8
RcHm_v2.0_Chr7g0184551 Rosa chinensis HOM05D003188 ORTHO05D003602 3.3e-15 86.3 75 64.0
RcHm_v2.0_Chr1g0373081 Rosa chinensis HOM05D000621 ORTHO05D000421 5.8e-12 75.5 54 66.7
FAN18G3545 Fragaria x ananassa HOM05D003188 ORTHO05D003602 2.2e-11 73.6 66 65.2
Dinv33142 Davidia involucrata HOM05D000621 ORTHO05D000421 7.8e-09 65.1 52 55.8
RcHm_v2.0_Chr1g0373061 Rosa chinensis HOM05D000621 ORTHO05D000421 1.0e-08 64.7 67 50.7
CSS0001187 Camellia sinensis var. sinensis HOM05D000621 ORTHO05D000421 1.3e-08 64.3 52 55.8
FvH4_7g26470 Fragaria vesca HOM05D000621 ORTHO05D000421 1.7e-08 63.9 53 54.7
Lj5C325G6 Lonicera japonica HOM05D000621 ORTHO05D000421 1.7e-08 63.9 53 52.8
RcHm_v2.0_Chr1g0373071 Rosa chinensis HOM05D000621 ORTHO05D000421 3.0e-08 63.2 53 52.8
Dinv05993 Davidia involucrata HOM05D000621 ORTHO05D000421 3.9e-08 62.8 52 53.8
CARHR009280 Cardamine hirsuta HOM05D000621 ORTHO05D000421 5.1e-08 62.4 52 55.8
Actinidia35509 Actinidia chinensis HOM05D000621 ORTHO05D000421 8.6e-08 61.6 62 45.2
Ca_10185_v3 Cicer arietinum L. HOM05D000621 ORTHO05D000421 8.6e-08 61.6 52 50.0
Thecc.05G325400 Theobroma cacao HOM05D000621 ORTHO05D000421 1.1e-07 61.2 52 50.0
DCAR_002112 Daucus carota HOM05D000621 ORTHO05D000421 1.5e-07 60.8 52 50.0
CSS0046820 Camellia sinensis var. sinensis HOM05D000621 ORTHO05D000421 2.5e-07 60.1 82 37.8
Prupe.2G269000 Prunus persica HOM05D000621 ORTHO05D000421 2.5e-07 60.1 53 50.9
GSVIVG01028157001 Vitis vinifera HOM05D000621 ORTHO05D000421 2.5e-07 60.1 52 53.8
FAN13G2738 Fragaria x ananassa HOM05D003188 ORTHO05D003602 3.3e-07 59.7 56 60.7
CAN.G293.6 Capsicum annuum HOM05D000621 ORTHO05D000421 4.3e-07 59.3 52 53.8
Gohir.A13G176300 Gossypium hirsutum HOM05D000621 ORTHO05D000421 4.3e-07 59.3 52 50.0
Gohir.D13G182700 Gossypium hirsutum HOM05D000621 ORTHO05D000421 4.3e-07 59.3 52 50.0
Gorai.013G208100 Gossypium raimondii HOM05D000621 ORTHO05D000421 4.3e-07 59.3 52 50.0
Rhsim11G0097900 Rhododendron simsii HOM05D000621 ORTHO05D000421 4.3e-07 59.3 53 50.9
CANSAT54G1464 Cannabis sativa HOM05D000621 ORTHO05D000421 5.6e-07 58.9 52 48.1
Lsat_1_v5_gn_6_15721 Lactuca sativa HOM05D000621 ORTHO05D000421 5.6e-07 58.9 52 51.9
Os05g0132400 Oryza sativa ssp. japonica HOM05D000621 ORTHO05D000421 5.6e-07 58.9 52 46.2
Psat6g153280 Pisum sativum HOM05D000621 ORTHO05D000421 5.6e-07 58.9 52 46.2
RcHm_v2.0_Chr3g0457541 Rosa chinensis HOM05D000621 ORTHO05D000421 5.6e-07 58.9 52 51.9
ECA247G0073 Erigeron canadensis HOM05D000621 ORTHO05D000421 7.3e-07 58.5 52 53.8
Lalb_Chr06g0167411 Lupinus albus HOM05D000621 ORTHO05D000421 7.3e-07 58.5 55 49.1
Lalb_Chr21g0310171 Lupinus albus HOM05D000621 ORTHO05D000421 7.3e-07 58.5 52 48.1
PGSC0003DMG400009053 Solanum tuberosum HOM05D000621 ORTHO05D000421 7.3e-07 58.5 52 53.8
THA.LOC104802712 Tarenaya hassleriana HOM05D000621 ORTHO05D000421 7.3e-07 58.5 59 42.4
CSS0003716 Camellia sinensis var. sinensis HOM05D000621 ORTHO05D000421 9.6e-07 58.2 56 42.9
Glyma.20G095500 Glycine max HOM05D000621 ORTHO05D000421 9.6e-07 58.2 52 50.0
Oeu008487.1 Olea europaea HOM05D000621 ORTHO05D000421 9.6e-07 58.2 52 50.0
Hund07303 Selenicereus undatus HOM05D000621 ORTHO05D000421 9.6e-07 58.2 51 49.0
SEGI_04713 Sequoiadendron giganteum HOM05D000621 ORTHO05D000421 9.6e-07 58.2 53 50.9
Sc16g0009170 Simmondsia chinensis HOM05D000621 ORTHO05D000421 9.6e-07 58.2 52 50.0
VMungo0720G2260 Vigna mungo HOM05D000621 ORTHO05D000421 9.6e-07 58.2 52 48.1
Prupe.5G216800 Prunus persica HOM05D003188 ORTHO05D003602 1.2e-06 57.8 146 35.6
Nitab4.5_0003838g0070 Nicotiana tabacum HOM05D000621 ORTHO05D000421 1.6e-06 57.4 52 46.2
Psat0s4293g0120 Pisum sativum HOM05D000621 ORTHO05D000421 1.6e-06 57.4 52 46.2
Hund09661 Selenicereus undatus HOM05D000621 ORTHO05D000421 1.6e-06 57.4 52 50.0
TWI56G1461 Tripterygium wilfordii HOM05D000621 ORTHO05D000421 1.6e-06 57.4 52 50.0
GSVIVG01031264001 Vitis vinifera HOM05D000621 ORTHO05D000421 1.6e-06 57.4 52 48.1
CiPaw.07G031400 Carya illinoinensis HOM05D000621 ORTHO05D000421 2.1e-06 57.0 52 50.0
Haze_04043 Corylus avellana HOM05D000621 ORTHO05D000421 2.1e-06 57.0 52 51.9
Haze_18599 Corylus avellana HOM05D003188 ORTHO05D003602 2.1e-06 57.0 143 34.3
FvH4_6g07840 Fragaria vesca HOM05D000621 ORTHO05D000421 2.1e-06 57.0 52 48.1
FAN14G5133 Fragaria x ananassa HOM05D000621 ORTHO05D000421 2.1e-06 57.0 52 48.1
Psat6g155120 Pisum sativum HOM05D000621 ORTHO05D000421 2.1e-06 57.0 52 46.2
Aa31LG1G5800 Aethionema arabicum HOM05D000621 ORTHO05D000421 2.8e-06 56.6 52 48.1
MBI19_g03282_MAGBIO Magnolia biondii HOM05D000621 ORTHO05D000421 2.8e-06 56.6 54 48.1
MD01G1173400 Malus domestica HOM05D000621 ORTHO05D000421 2.8e-06 56.6 52 50.0
PSO210G6820 Papaver somniferum HOM05D000621 ORTHO05D000421 2.8e-06 56.6 52 46.2
THA.LOC104823716 Tarenaya hassleriana HOM05D000621 ORTHO05D000421 2.8e-06 56.6 52 51.9
MSTRG.27927 Avicennia marina HOM05D000621 ORTHO05D000421 3.6e-06 56.2 52 46.2
CSS0010554 Camellia sinensis var. sinensis HOM05D000621 ORTHO05D000421 3.6e-06 56.2 52 53.8
Duzib151G0248 Durio zibethinus HOM05D000621 ORTHO05D000421 3.6e-06 56.2 53 47.2
FAN05G0194 Fragaria x ananassa HOM05D000621 ORTHO05D000421 3.6e-06 56.2 52 48.1
HanXRQChr10g0284821 Helianthus annuus HOM05D000621 ORTHO05D000421 4.7e-06 55.8 52 51.9
MD01G1179100 Malus domestica HOM05D000621 ORTHO05D000421 4.7e-06 55.8 52 50.0
Rhsim02G0002100 Rhododendron simsii HOM05D000621 ORTHO05D000421 4.7e-06 55.8 52 50.0
TAR633G2377 Trochodendron aralioides HOM05D000621 ORTHO05D000421 4.7e-06 55.8 52 48.1
Aqoxy2G02650 Aquilegia oxysepala HOM05D000621 ORTHO05D000421 6.2e-06 55.5 52 48.1
BcaB07g34130 Brassica carinata HOM05D000621 ORTHO05D000421 6.2e-06 55.5 52 46.2
CANSAT80G2825 Cannabis sativa HOM05D000621 ORTHO05D000421 6.2e-06 55.5 51 45.1
ECA238G0422 Erigeron canadensis HOM05D000621 ORTHO05D000421 6.2e-06 55.5 102 29.4
FAN01G0852 Fragaria x ananassa HOM05D000621 ORTHO05D000421 6.2e-06 55.5 48 54.2
FAN02G2063 Fragaria x ananassa HOM05D000621 ORTHO05D000421 6.2e-06 55.5 52 48.1
FAN09G2197 Fragaria x ananassa HOM05D000621 ORTHO05D000421 6.2e-06 55.5 71 40.8
Hma1.2p1_0052F.1_g030670 Hydrangea macrophylla HOM05D000621 ORTHO05D000421 6.2e-06 55.5 52 48.1
Psat6g154280 Pisum sativum HOM05D000621 ORTHO05D000421 6.2e-06 55.5 52 42.3
QL03p016316 Quercus lobata HOM05D000621 ORTHO05D000421 6.2e-06 55.5 52 48.1
QL03p016528 Quercus lobata HOM05D000621 ORTHO05D000421 6.2e-06 55.5 52 48.1
QL03p016784 Quercus lobata HOM05D000621 ORTHO05D000421 6.2e-06 55.5 52 48.1
Rhsim04G0242700 Rhododendron simsii HOM05D000621 ORTHO05D000421 6.2e-06 55.5 62 40.3
vmacro01581 Vaccinium macrocarpon HOM05D000621 ORTHO05D000421 6.2e-06 55.5 53 47.2
EL10As5g23608 Beta vulgaris HOM05D000621 ORTHO05D000421 8.1e-06 55.1 54 48.1
AUR62011757 Chenopodium quinoa HOM05D000621 ORTHO05D000421 8.1e-06 55.1 52 48.1
AUR62024602 Chenopodium quinoa HOM05D000621 ORTHO05D000421 8.1e-06 55.1 52 48.1
Cc01_g21650 Coffea canephora HOM05D000621 ORTHO05D000421 8.1e-06 55.1 52 50.0
FvH4_2g23230 Fragaria vesca HOM05D000621 ORTHO05D000421 8.1e-06 55.1 52 48.1
FAN24G2994 Fragaria x ananassa HOM05D000621 ORTHO05D000421 8.1e-06 55.1 52 48.1
Medtr1g084210 Medicago truncatula HOM05D000621 ORTHO05D000421 8.1e-06 55.1 52 46.2
Oeu053731.1 Olea europaea HOM05D000621 ORTHO05D000421 8.1e-06 55.1 52 50.0
QL10p022977 Quercus lobata HOM05D003188 ORTHO05D003602 8.1e-06 55.1 143 33.6
SHI18046 Sapria himalayana HOM05D000621 ORTHO05D000421 8.1e-06 55.1 59 42.4


User provided reference genes

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