Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 5.2e-99 364.4 185 100.0
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 2.0e-98 362.5 184 99.5
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.7e-94 349.4 184 97.3
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 4.7e-92 341.3 182 95.6
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 1.2e-82 310.1 181 86.2
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 1.5e-66 256.5 181 74.6
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 4.8e-60 235.0 187 66.3
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 5.3e-59 231.5 189 63.0
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 3.9e-54 215.3 189 60.3
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 5.7e-53 211.5 189 59.8
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 2.1e-52 209.5 184 59.8
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 6.9e-51 204.5 158 66.5
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 1.2e-50 203.8 189 57.7
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 1.7e-49 199.9 181 54.1
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 1.7e-49 199.9 184 56.5
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 1.7e-49 199.9 187 54.0
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 1.7e-49 199.9 191 56.5
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 3.8e-49 198.7 189 54.0
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 3.8e-49 198.7 179 59.2
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 8.5e-49 197.6 184 55.4
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 1.9e-48 196.4 189 56.1
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 3.2e-48 195.7 189 53.4
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 4.2e-48 195.3 181 56.9
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 5.5e-48 194.9 189 56.6
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 7.2e-48 194.5 187 51.9
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 2.1e-47 193.0 191 51.8
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 4.6e-47 191.8 192 54.2
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 6.1e-47 191.4 187 52.4
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 6.1e-47 191.4 188 51.6
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 7.9e-47 191.0 188 52.1
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 1.8e-46 189.9 184 54.9
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 1.8e-46 189.9 188 51.1
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 3.0e-46 189.1 188 54.3
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 6.7e-46 188.0 184 54.9
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 1.9e-45 186.4 185 53.5
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 1.9e-45 186.4 161 59.0
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 2.5e-45 186.0 189 54.0
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 3.3e-45 185.7 184 54.3
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 4.3e-45 185.3 131 68.7
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 5.7e-45 184.9 186 51.6
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 1.3e-44 183.7 184 53.8
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 2.2e-44 183.0 162 58.0
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 2.2e-44 183.0 162 58.0
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 2.2e-44 183.0 185 51.4
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 2.2e-44 183.0 168 56.0
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 2.8e-44 182.6 131 69.5
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 6.3e-44 181.4 188 53.7
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 8.2e-44 181.0 187 52.9
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 1.1e-43 180.6 178 52.2
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 2.4e-43 179.5 185 51.9
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 4.1e-43 178.7 133 64.7
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 6.9e-43 177.9 186 52.7
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 1.2e-42 177.2 188 50.0
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 1.5e-42 176.8 188 52.1
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 4.5e-42 175.3 131 66.4
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 4.5e-42 175.3 184 52.2
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 5.9e-42 174.9 182 51.6
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 1.0e-41 174.1 206 47.6
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 6.5e-41 171.4 131 62.6
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 8.5e-41 171.0 131 64.1
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 2.5e-40 169.5 150 58.7
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 6.7e-38 161.4 189 46.0
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 1.5e-37 160.2 186 48.4
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 2.6e-37 159.5 165 49.7
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 2.6e-37 159.5 163 53.4
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 2.6e-37 159.5 131 61.1
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 7.4e-37 157.9 132 59.1
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 1.3e-36 157.1 131 55.0
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 1.1e-35 154.1 178 49.4
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 1.2e-34 150.6 184 43.5
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 4.5e-34 148.7 117 62.4
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 3.8e-33 145.6 190 41.1
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 8.5e-33 144.4 183 47.5
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 3.2e-32 142.5 139 56.1
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 9.4e-32 141.0 184 42.9
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 2.3e-30 136.3 177 43.5
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 3.9e-30 135.6 194 40.7
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 6.7e-30 134.8 188 43.6
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 8.8e-30 134.4 185 41.6
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 8.8e-30 134.4 185 41.6
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 1.5e-29 133.7 136 46.3
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 2.6e-29 132.9 187 40.6
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 5.7e-29 131.7 186 40.3
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 5.7e-29 131.7 187 40.6
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 7.4e-29 131.3 187 40.6
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 2.2e-28 129.8 168 43.5
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 2.2e-28 129.8 185 38.9
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 1.8e-27 126.7 183 41.5
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 4.1e-27 125.6 168 42.3
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 5.3e-27 125.2 134 49.3
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 1.2e-26 124.0 138 44.2
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 2.6e-26 122.9 185 41.6
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 2.5e-24 116.3 184 39.1
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 8.8e-22 107.8 139 43.2
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 2.8e-20 102.8 122 47.5
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 2.4e-19 99.8 76 63.2
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 1.0e-17 94.4 154 35.7
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 1.2e-15 87.4 137 33.6
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 3.0e-14 82.8 185 30.8
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 4.0e-14 82.4 120 40.8
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 3.7e-12 75.9 135 36.3
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 3.7e-12 75.9 135 36.3


User provided reference genes

Program Settings