Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G4068 Fragaria x ananassa HOM05D006782 ORTHO05D011275 6.6e-55 217.2 119 100.0
FAN06G5044 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.6e-48 196.1 123 89.4
FAN19G0520 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.8e-45 185.3 118 86.4
FAN12G1707 Fragaria x ananassa HOM05D006782 ORTHO05D011275 6.9e-44 180.6 119 83.2
FAN08G0293 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.5e-38 162.2 97 87.6
FAN08G0921 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.5e-38 162.2 97 87.6
FAN19G2580 Fragaria x ananassa HOM05D006782 ORTHO05D207724 2.5e-38 162.2 97 87.6
FAN13G2828 Fragaria x ananassa HOM05D006782 ORTHO05D204244 5.6e-38 161.0 100 84.0
FAN12G3887 Fragaria x ananassa HOM05D006782 ORTHO05D203567 1.3e-37 159.8 97 86.6
FAN10G3762 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.6e-37 159.5 96 86.5
FAN10G1058 Fragaria x ananassa HOM05D006782 ORTHO05D011275 4.0e-36 154.8 93 87.1
FAN03G3266 Fragaria x ananassa HOM05D006782 ORTHO05D011275 6.9e-36 154.1 111 77.5
FAN11G3638 Fragaria x ananassa HOM05D006782 ORTHO05D011275 6.9e-36 154.1 111 76.6
FAN14G5237 Fragaria x ananassa HOM05D006782 ORTHO05D011275 9.0e-36 153.7 93 88.2
FAN06G2652 Fragaria x ananassa HOM05D006782 ORTHO05D032388 1.2e-35 153.3 95 85.3
FAN02G1533 Fragaria x ananassa HOM05D006782 ORTHO05D202813 2.6e-35 152.1 93 87.1
FAN09G3720 Fragaria x ananassa HOM05D006782 ORTHO05D011275 5.8e-35 151.0 93 86.0
FAN16G2026 Fragaria x ananassa HOM05D006782 ORTHO05D205423 7.6e-35 150.6 95 84.2
FAN26G2872 Fragaria x ananassa HOM05D006782 ORTHO05D208352 1.3e-34 149.8 93 86.0
FAN18G3333 Fragaria x ananassa HOM05D006782 ORTHO05D201160 2.2e-34 149.1 97 81.4
FAN22G1259 Fragaria x ananassa HOM05D006782 ORTHO05D209502 2.9e-34 148.7 91 86.8
FAN22G2115 Fragaria x ananassa HOM05D006782 ORTHO05D201415 2.9e-34 148.7 91 86.8
FAN02G2972 Fragaria x ananassa HOM05D006782 ORTHO05D207747 3.8e-34 148.3 97 81.4
FAN21G2650 Fragaria x ananassa HOM05D006782 ORTHO05D202800 6.5e-34 147.5 93 84.9
FAN18G2750 Fragaria x ananassa HOM05D006782 ORTHO05D011275 3.2e-33 145.2 95 86.3
FAN24G1064 Fragaria x ananassa HOM05D006782 ORTHO05D011275 4.2e-33 144.8 110 76.4
FAN13G1891 Fragaria x ananassa HOM05D006782 ORTHO05D009662 9.3e-33 143.7 93 82.8
FAN06G0350 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.2e-32 143.3 116 73.3
FAN18G0670 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.2e-32 143.3 93 82.8
FAN25G1405 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.2e-32 143.3 116 73.3
FAN09G0574 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.6e-32 142.9 94 84.0
FAN14G1719 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.6e-32 142.9 94 85.1
FAN11G0001 Fragaria x ananassa HOM05D000008 ORTHO05D000005 2.7e-32 142.1 103 80.6
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 3.5e-32 141.7 97 82.5
FAN14G3775 Fragaria x ananassa HOM05D006782 ORTHO05D011275 4.6e-32 141.4 94 83.0
FAN11G2061 Fragaria x ananassa HOM05D006782 ORTHO05D204056 6.0e-32 141.0 91 83.5
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.3e-31 139.8 103 82.5
FAN14G2649 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.3e-31 139.8 102 81.4
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.9e-31 138.3 97 80.4
FvH4_5g19441 Fragaria vesca HOM05D006782 ORTHO05D011275 1.5e-30 136.3 97 83.5
FAN06G2964 Fragaria x ananassa HOM05D000020 ORTHO05D007189 2.5e-30 135.6 103 79.6
FvH4_7g23880 Fragaria vesca HOM05D000020 ORTHO05D007189 3.3e-30 135.2 103 79.6
FAN11G0567 Fragaria x ananassa HOM05D006782 ORTHO05D203986 7.4e-30 134.0 84 84.5
FAN15G2232 Fragaria x ananassa HOM05D006782 ORTHO05D206330 9.6e-30 133.7 84 84.5
FAN28G0431 Fragaria x ananassa HOM05D006782 ORTHO05D011275 9.6e-30 133.7 103 74.8
FAN28G1305 Fragaria x ananassa HOM05D006782 ORTHO05D011275 3.7e-29 131.7 102 75.5
FvH4_6g34462 Fragaria vesca HOM05D006782 ORTHO05D011275 8.2e-29 130.6 107 77.6
FAN07G0282 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.2e-27 126.7 75 90.7
FAN23G1515 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.6e-27 125.6 102 76.5
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 1.0e-26 123.6 93 75.3
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.0e-26 123.6 97 73.2
FAN17G1691 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.3e-26 123.2 97 73.2
FAN01G3131 Fragaria x ananassa HOM05D006782 ORTHO05D011275 3.8e-26 121.7 97 72.2
FAN12G1891 Fragaria x ananassa HOM05D006782 ORTHO05D207534 1.9e-25 119.4 67 91.0
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 3.2e-25 118.6 93 72.0
FAN28G0105 Fragaria x ananassa HOM05D006782 ORTHO05D001690 6.1e-24 114.4 94 72.3
FAN03G1342 Fragaria x ananassa HOM05D000020 ORTHO05D007189 1.0e-23 113.6 102 70.6
FAN17G1596 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.1e-22 110.2 73 78.1
FAN14G1694 Fragaria x ananassa HOM05D006782 ORTHO05D204977 2.8e-21 105.5 128 59.4
FvH4_4g06881 Fragaria vesca HOM05D006782 ORTHO05D011275 1.7e-18 96.3 87 71.3
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 6.5e-18 94.4 98 65.3
FAN18G0595 Fragaria x ananassa HOM05D006782 ORTHO05D011275 6.5e-18 94.4 85 68.2
MD07G1213000 Malus domestica HOM05D000020 ORTHO05D007189 1.9e-17 92.8 106 55.7
MD01G1145800 Malus domestica HOM05D000020 ORTHO05D007189 1.0e-15 87.0 97 54.6
Prupe.2G245200 Prunus persica HOM05D000020 ORTHO05D007189 5.1e-15 84.7 107 52.3
FAN11G1676 Fragaria x ananassa HOM05D010664 ORTHO05D210082 1.1e-12 77.0 56 76.8
FAN18G1219 Fragaria x ananassa HOM05D010664 ORTHO05D206657 1.1e-12 77.0 70 64.3
FAN28G1242 Fragaria x ananassa HOM05D006782 ORTHO05D035260 1.1e-12 77.0 53 81.1
FAN26G0420 Fragaria x ananassa HOM05D006782 ORTHO05D035260 3.1e-12 75.5 53 79.2
FAN26G0390 Fragaria x ananassa HOM05D006782 ORTHO05D011275 5.3e-12 74.7 102 53.9
CANSAT56G3422 Cannabis sativa HOM05D000020 ORTHO05D007189 1.3e-10 70.1 86 50.0
FAN17G2023 Fragaria x ananassa HOM05D011019 ORTHO05D200767 1.1e-09 67.0 41 85.4
Medtr5g081720 Medicago truncatula HOM05D000020 ORTHO05D007189 1.4e-09 66.6 94 44.7
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 2.5e-09 65.9 39 87.2
RcHm_v2.0_Chr1g0369251 Rosa chinensis HOM05D000020 ORTHO05D007189 1.6e-08 63.2 107 47.7
Lalb_Chr04g0250801 Lupinus albus HOM05D000020 ORTHO05D007189 7.9e-08 60.8 83 47.0
Actinidia29672 Actinidia chinensis HOM05D000020 ORTHO05D007189 1.0e-07 60.5 84 46.4
Lsat_1_v5_gn_9_63241 Lactuca sativa HOM05D000020 ORTHO05D007189 1.0e-07 60.5 82 46.3
Ciclev10033928m.g Citrus clementina HOM05D000020 ORTHO05D007189 1.4e-07 60.1 100 47.0
PGSC0003DMG400027385 Solanum tuberosum HOM05D000020 ORTHO05D007189 1.4e-07 60.1 90 47.8
PGSC0003DMG400031040 Solanum tuberosum HOM05D000020 ORTHO05D007189 1.4e-07 60.1 90 47.8
CsaV3_5G008860 Cucumis sativus L. HOM05D000020 ORTHO05D007189 1.8e-07 59.7 88 44.3
Lsat_1_v5_gn_2_120421 Lactuca sativa HOM05D000020 ORTHO05D007189 1.8e-07 59.7 88 46.6
TWI73G0310 Tripterygium wilfordii HOM05D000020 ORTHO05D007189 1.8e-07 59.7 70 52.9
ClCG07G003890 Citrullus lanatus HOM05D000020 ORTHO05D007189 3.0e-07 58.9 103 41.7
AUR62022832 Chenopodium quinoa HOM05D000020 ORTHO05D007189 5.1e-07 58.2 83 47.0
FvH4_6g34463 Fragaria vesca HOM05D006782 ORTHO05D035260 5.1e-07 58.2 54 68.5
TWI09G0809 Tripterygium wilfordii HOM05D000020 ORTHO05D007189 5.1e-07 58.2 102 43.1
HanXRQChr09g0246881 Helianthus annuus HOM05D000020 ORTHO05D007189 1.5e-06 56.6 87 41.4
Lalb_Chr10g0104971 Lupinus albus HOM05D000020 ORTHO05D007189 1.5e-06 56.6 49 53.1
Cpa.g.sc19.225 Carica papaya HOM05D000020 ORTHO05D007189 2.0e-06 56.2 101 39.6
AUR62012199 Chenopodium quinoa HOM05D000020 ORTHO05D007189 2.0e-06 56.2 84 45.2
Sabra10G0149100 Salix brachista HOM05D000020 ORTHO05D007189 2.0e-06 56.2 85 44.7
TAR623G0626 Trochodendron aralioides HOM05D000020 ORTHO05D007189 2.0e-06 56.2 47 57.4
AT3G55780 Arabidopsis thaliana HOM05D000020 ORTHO05D007189 4.4e-06 55.1 83 39.8
PGR044G2611 Punica granatum HOM05D000020 ORTHO05D007189 4.4e-06 55.1 95 46.3
THA.LOC104810181 Tarenaya hassleriana HOM05D000020 ORTHO05D007189 4.4e-06 55.1 94 37.2
AL5G37060 Arabidopsis lyrata HOM05D000020 ORTHO05D007189 5.7e-06 54.7 83 39.8
Rhsim03G0139400 Rhododendron simsii HOM05D000020 ORTHO05D007189 5.7e-06 54.7 87 40.2
SalBow6G4238 Salvia bowleyana HOM05D000020 ORTHO05D007189 7.4e-06 54.3 64 50.0
SalBow6G4632 Salvia bowleyana HOM05D000020 ORTHO05D007189 7.4e-06 54.3 64 50.0
Sed0018426 Sechium edule HOM05D000020 ORTHO05D007189 7.4e-06 54.3 82 46.3
Sed0021137 Sechium edule HOM05D000020 ORTHO05D007189 7.4e-06 54.3 85 45.9
Manes.07G124600 Manihot esculenta HOM05D000020 ORTHO05D007189 9.7e-06 53.9 89 38.2


User provided reference genes

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