Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 7.7e-121 437.2 224 100.0
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 2.1e-118 429.1 225 99.1
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.1e-118 429.1 225 99.1
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.8e-117 426.0 225 98.7
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 3.6e-110 401.7 221 94.6
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.8e-107 392.1 222 94.6
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 1.3e-88 330.1 223 81.2
FAN15G2538 Fragaria x ananassa HOM05D007269 ORTHO05D008531 7.3e-79 297.7 161 98.8
Prupe.5G148200 Prunus persica HOM05D007269 ORTHO05D008531 8.4e-43 177.9 217 52.5
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 7.9e-41 171.4 221 53.4
MD14G1153300 Malus domestica HOM05D007269 ORTHO05D008531 9.6e-39 164.5 221 52.0
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 2.2e-27 126.7 210 43.8
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 3.8e-27 125.9 210 42.9
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.2e-25 120.9 211 43.1
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 1.9e-23 113.6 212 37.7
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 5.7e-23 112.1 219 41.1
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 2.1e-22 110.2 212 38.7
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 4.8e-22 109.0 212 43.9
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 1.4e-21 107.5 211 39.8
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.8e-21 107.1 210 40.0
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 3.1e-21 106.3 218 39.4
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 4.5e-20 102.4 212 35.4
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 1.3e-19 100.9 230 36.1
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 8.5e-19 98.2 225 36.9
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 1.4e-18 97.4 225 36.4
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 1.4e-18 97.4 222 36.9
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 1.9e-18 97.1 216 39.4
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 4.6e-17 92.4 237 34.6
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 4.6e-17 92.4 215 36.7
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 7.9e-17 91.7 212 36.3
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 1.0e-16 91.3 221 34.8
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 1.3e-16 90.9 210 36.2
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 1.1e-15 87.8 122 45.9
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 1.5e-15 87.4 206 38.8
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 1.5e-15 87.4 223 34.5
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 1.5e-15 87.4 221 33.5
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 7.4e-15 85.1 245 31.8
Phvul.002G285300 Phaseolus vulgaris HOM05D007269 ORTHO05D008531 7.4e-15 85.1 216 34.7
ECA232G3539 Erigeron canadensis HOM05D007269 ORTHO05D008531 4.8e-14 82.4 131 40.5
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 4.8e-14 82.4 228 34.2
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 4.8e-14 82.4 242 32.2
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 4.8e-14 82.4 218 33.5
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 8.2e-14 81.6 220 32.3
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 1.4e-13 80.9 212 32.1
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 1.8e-13 80.5 238 31.5
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 1.8e-13 80.5 216 32.4
Cpa.g.sc4.165 Carica papaya HOM05D007269 ORTHO05D008531 3.1e-13 79.7 216 31.5
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 4.1e-13 79.3 220 31.8
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 4.1e-13 79.3 237 32.9
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 5.3e-13 79.0 224 33.0
Haze_07172 Corylus avellana HOM05D007269 ORTHO05D008531 6.9e-13 78.6 176 38.1
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 1.5e-12 77.4 221 37.1
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 2.0e-12 77.0 212 34.0
Cfa018768 Carpinus fangiana HOM05D007269 ORTHO05D008531 3.4e-12 76.3 172 37.2
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 5.9e-12 75.5 218 33.5
TPR.G28777 Trifolium pratense HOM05D007269 ORTHO05D008531 1.0e-11 74.7 223 35.0
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 1.7e-11 73.9 89 47.2
PGSC0003DMG400026484 Solanum tuberosum HOM05D007269 ORTHO05D008531 1.7e-11 73.9 232 30.2
Sopen03g028190 Solanum pennellii HOM05D007269 ORTHO05D008531 2.2e-11 73.6 218 31.7
Solyc03g097430.1 Solanum lycopersicum HOM05D007269 ORTHO05D008531 2.9e-11 73.2 224 30.4
CAN.G732.21 Capsicum annuum HOM05D007269 ORTHO05D008531 6.5e-11 72.0 222 32.4
Dinv23173 Davidia involucrata HOM05D007269 ORTHO05D008531 8.5e-11 71.6 157 38.9
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 1.4e-10 70.9 207 33.3
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 1.4e-10 70.9 222 29.3
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 1.9e-10 70.5 210 33.8
Psat7g036960 Pisum sativum HOM05D007269 ORTHO05D008531 5.5e-10 68.9 219 35.6
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 2.1e-09 67.0 214 32.7
MBI07_g46909_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 7.9e-09 65.1 146 35.6
DCAR_021638 Daucus carota HOM05D007269 ORTHO05D008531 1.4e-08 64.3 232 29.3
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 2.3e-08 63.5 236 30.1
Migut.M01219 Erythranthe guttata HOM05D007269 ORTHO05D008531 3.9e-08 62.8 226 30.5
Potri.003G168200 Populus trichocarpa HOM05D007269 ORTHO05D008531 3.9e-08 62.8 157 39.5
DCAR_021637 Daucus carota HOM05D007269 ORTHO05D008531 6.7e-08 62.0 240 29.2
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 2.0e-07 60.5 220 28.6
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 2.0e-07 60.5 230 30.9
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 9.7e-07 58.2 173 32.9
VMungo0251G2992 Vigna mungo HOM05D031312 ORTHO05D008531 9.7e-07 58.2 175 34.9
Zm00001eb142990 Zea mays HOM05D007269 ORTHO05D008531 9.7e-07 58.2 96 38.5
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 1.3e-06 57.8 246 29.3
Oeu001328.1 Olea europaea HOM05D007269 ORTHO05D008531 1.3e-06 57.8 264 27.3
Prupe.1G222200 Prunus persica HOM05D007269 ORTHO05D008531 1.3e-06 57.8 133 31.6
Zm00001eb364140 Zea mays HOM05D007269 ORTHO05D008531 1.3e-06 57.8 216 28.7
MD16G1123500 Malus domestica HOM05D007269 ORTHO05D008531 2.8e-06 56.6 230 29.1
Oeu012652.1 Olea europaea HOM05D007269 ORTHO05D008531 4.8e-06 55.8 133 35.3


User provided reference genes

Program Settings