Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G3921 Fragaria x ananassa HOM05D021590 ORTHO05D208334 2.6e-112 408.7 197 100.0
FAN11G3394 Fragaria x ananassa HOM05D020287 ORTHO05D003103 1.5e-48 196.8 194 61.9
FAN16G1176 Fragaria x ananassa HOM05D020287 ORTHO05D003103 2.5e-43 179.5 176 60.2
FAN18G4410 Fragaria x ananassa HOM05D020287 ORTHO05D003103 9.6e-43 177.6 186 58.1
FAN09G1227 Fragaria x ananassa HOM05D020287 ORTHO05D003103 2.8e-42 176.0 176 60.2
FAN06G4651 Fragaria x ananassa HOM05D021590 ORTHO05D046083 1.8e-28 130.2 62 98.4
FvH4_7g20390 Fragaria vesca HOM05D021590 ORTHO05D046083 5.1e-28 128.6 62 96.8
FAN11G1813 Fragaria x ananassa HOM05D021590 ORTHO05D201796 8.2e-26 121.3 213 41.3
FAN25G2536 Fragaria x ananassa HOM05D001065 ORTHO05D003103 1.3e-18 97.4 123 48.8
RcHm_v2.0_Chr5g0003401 Rosa chinensis HOM05D001065 ORTHO05D003103 1.4e-17 94.0 116 48.3
FAN21G0065 Fragaria x ananassa HOM05D001065 ORTHO05D003103 3.1e-17 92.8 124 47.6
FAN21G0171 Fragaria x ananassa HOM05D001065 ORTHO05D003103 3.1e-17 92.8 124 47.6
FAN02G2510 Fragaria x ananassa HOM05D020287 ORTHO05D003103 4.1e-17 92.4 143 43.4
FvH4_3g02280 Fragaria vesca HOM05D001065 ORTHO05D003103 1.5e-16 90.5 88 58.0
Prupe.5G005400 Prunus persica HOM05D001065 ORTHO05D003103 4.8e-10 68.9 118 40.7
Ciclev10001069m.g Citrus clementina HOM05D001065 ORTHO05D003103 1.8e-09 67.0 128 35.2
Medtr3g116120 Medicago truncatula HOM05D001065 ORTHO05D003103 7.0e-09 65.1 86 45.3
Prupe.4G022300 Prunus persica HOM05D001065 ORTHO05D003103 1.6e-08 63.9 123 39.8
Phvul.009G008500 Phaseolus vulgaris HOM05D001065 ORTHO05D003103 7.7e-08 61.6 87 43.7
MD05G1344100 Malus domestica HOM05D001065 ORTHO05D003103 1.3e-07 60.8 117 34.2
Glyma.06G014400 Glycine max HOM05D001065 ORTHO05D003103 2.9e-07 59.7 87 43.7
GSVIVG01013428001 Vitis vinifera HOM05D001065 ORTHO05D003103 2.9e-07 59.7 114 38.6
SGA_v2.0_scaffold220G42645 Striga asiatica HOM05D001065 ORTHO05D003103 3.8e-07 59.3 133 33.1
FAN03G2256 Fragaria x ananassa HOM05D021590 ORTHO05D200459 6.5e-07 58.5 35 77.1
Sed0018640 Sechium edule HOM05D001065 ORTHO05D003103 6.5e-07 58.5 118 34.7
Atru.chr13.59 Acer truncatum HOM05D001065 ORTHO05D003103 8.5e-07 58.2 112 35.7
Cpa.g.sc26.13 Carica papaya HOM05D001065 ORTHO05D003103 8.5e-07 58.2 86 43.0
Glyma.04G014400 Glycine max HOM05D001065 ORTHO05D003103 8.5e-07 58.2 87 43.7
Manes.18G001900 Manihot esculenta HOM05D001065 ORTHO05D003103 8.5e-07 58.2 117 35.0
Dinv13759 Davidia involucrata HOM05D001065 ORTHO05D003103 1.5e-06 57.4 117 33.3
VMungo1309G2971 Vigna mungo HOM05D001065 ORTHO05D003103 1.5e-06 57.4 87 41.4
FAN05G2821 Fragaria x ananassa HOM05D021590 ORTHO05D207294 1.9e-06 57.0 24 95.8
Ca_15384_v3 Cicer arietinum L. HOM05D001065 ORTHO05D003103 3.2e-06 56.2 87 41.4
MSTRG.24517 Avicennia marina HOM05D001065 ORTHO05D003103 5.5e-06 55.5 85 38.8
TPR.G38238 Trifolium pratense HOM05D001065 ORTHO05D003103 5.5e-06 55.5 86 40.7
arahy.Tifrunner.gnm1.ann1.W4A4ZK Arachis hypogaea HOM05D001065 ORTHO05D003103 7.2e-06 55.1 89 39.3
MD00G1206800 Malus domestica HOM05D001065 ORTHO05D003103 7.2e-06 55.1 96 35.4
arahy.Tifrunner.gnm1.ann1.L2XFJE Arachis hypogaea HOM05D001065 ORTHO05D003103 9.4e-06 54.7 89 39.3
Psat2g065040 Pisum sativum HOM05D001065 ORTHO05D003103 9.4e-06 54.7 117 35.9


User provided reference genes

Program Settings