Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.3e-201 704.1 350 100.0
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.5e-195 685.3 350 97.4
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.6e-195 684.1 350 96.9
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 1.3e-194 682.9 350 97.4
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.7e-191 672.5 373 91.2
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.7e-181 638.6 376 87.5
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 1.0e-180 636.7 350 90.6
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.6e-178 629.4 351 89.7
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 1.4e-164 583.2 351 82.6
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 8.2e-162 573.9 350 82.9
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 7.2e-158 560.8 348 80.2
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 2.7e-157 558.9 351 79.8
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 1.0e-156 557.0 351 79.5
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 2.3e-156 555.8 352 78.1
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.5e-155 553.1 351 79.8
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 2.0e-155 552.7 352 79.3
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 4.4e-155 551.6 352 78.4
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 6.3e-154 547.7 346 79.2
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 2.0e-152 542.7 338 81.4
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 4.5e-152 541.6 347 77.2
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 7.7e-152 540.8 332 79.8
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 7.7e-152 540.8 332 79.8
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 1.3e-151 540.0 348 77.0
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 2.9e-151 538.9 349 77.1
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 3.8e-151 538.5 337 80.4
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 5.0e-151 538.1 339 78.8
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 6.5e-151 537.7 336 79.8
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 6.5e-151 537.7 353 77.3
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 8.5e-151 537.3 347 77.8
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 2.5e-150 535.8 351 75.8
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 4.2e-150 535.0 341 77.1
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 4.2e-150 535.0 393 71.5
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 9.4e-150 533.9 334 78.1
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 3.6e-149 531.9 392 71.4
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 8.0e-149 530.8 346 77.5
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 1.0e-148 530.4 331 79.2
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 1.8e-148 529.6 341 76.8
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 8.8e-148 527.3 340 77.4
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 1.2e-147 526.9 342 77.5
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 2.6e-147 525.8 352 75.3
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 4.4e-147 525.0 307 83.1
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 5.7e-147 524.6 333 77.8
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 1.3e-146 523.5 346 74.9
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 1.3e-146 523.5 347 76.1
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 1.7e-146 523.1 331 77.6
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 2.2e-146 522.7 346 75.4
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 4.8e-146 521.5 325 78.5
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 6.3e-146 521.2 352 73.3
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 8.2e-146 520.8 350 74.6
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 1.1e-145 520.4 339 76.7
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 2.4e-145 519.2 336 76.5
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 2.4e-145 519.2 349 74.5
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 4.1e-145 518.5 338 75.4
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 4.1e-145 518.5 337 76.0
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 5.3e-145 518.1 349 73.6
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 5.3e-145 518.1 346 74.0
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 5.3e-145 518.1 311 82.0
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 9.1e-145 517.3 349 73.4
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 9.1e-145 517.3 351 73.5
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 1.2e-144 516.9 349 74.5
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 1.2e-144 516.9 348 73.9
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 2.0e-144 516.2 328 77.1
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 2.0e-144 516.2 348 74.1
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 3.5e-144 515.4 346 74.0
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 3.5e-144 515.4 338 75.7
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 5.9e-144 514.6 348 73.6
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 7.7e-144 514.2 337 75.1
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 7.7e-144 514.2 336 75.6
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 1.0e-143 513.8 324 77.8
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 1.0e-143 513.8 334 76.9
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 2.2e-143 512.7 346 74.0
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 4.7e-141 505.0 319 77.1
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 3.0e-140 502.3 341 73.3
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 3.0e-140 502.3 334 75.7
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 2.0e-139 499.6 334 75.4
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 1.2e-136 490.3 361 70.4
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 2.0e-136 489.6 363 69.4
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 2.0e-136 489.6 363 69.4
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 1.7e-135 486.5 302 79.1
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 1.2e-133 480.3 363 67.8
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 2.8e-133 479.2 337 71.8
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 1.4e-132 476.9 338 70.7
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 2.3e-132 476.1 309 76.7
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 2.3e-132 476.1 306 78.8
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 2.3e-132 476.1 340 71.8
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 5.7e-131 471.5 285 80.0
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 8.3e-130 467.6 319 72.1
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.8e-129 466.5 391 61.9
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 3.1e-129 465.7 284 79.2
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 1.1e-126 457.2 260 86.9
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 1.6e-125 453.4 288 77.8
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 8.0e-125 451.1 353 68.0
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.4e-124 450.3 275 80.4
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 6.8e-124 448.0 340 67.9
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 4.4e-123 445.3 379 62.3
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 7.5e-123 444.5 288 76.0
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 8.6e-119 431.0 281 75.1
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 2.1e-117 426.4 324 68.5
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.5e-115 420.2 347 62.5
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 5.4e-113 411.8 286 72.4
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 3.6e-109 399.1 323 60.7
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 1.4e-108 397.1 311 63.7
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 2.0e-107 393.3 332 59.6
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 5.8e-107 391.7 336 62.2
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.1e-105 387.5 233 82.8
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 3.2e-105 386.0 300 64.3
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 6.0e-104 381.7 325 59.1
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 1.7e-103 380.2 327 58.1
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 1.1e-102 377.5 286 69.2
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 2.1e-101 373.2 277 69.0
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 1.0e-95 354.4 269 67.7
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 1.1e-94 350.9 248 70.2
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 3.1e-92 342.8 324 53.4
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 3.0e-87 326.2 223 72.2
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 3.1e-84 316.2 234 65.4
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 2.9e-82 309.7 223 71.7
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 3.5e-72 276.2 366 43.4
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.1e-54 218.0 181 63.5
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 2.2e-53 213.8 150 74.7
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.8e-52 210.7 143 74.1
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 3.8e-50 203.0 330 37.9
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 3.5e-43 179.9 129 67.4
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 1.3e-42 177.9 107 73.8
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 8.0e-40 168.7 279 37.6
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.2e-32 144.8 97 73.2
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 1.2e-19 101.7 98 54.1
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 1.2e-14 85.1 69 59.4
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 6.3e-13 79.3 71 63.4
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 1.6e-11 74.7 50 74.0


User provided reference genes

Program Settings