Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 0.0e+00 1186.0 626 100.0
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 0.0e+00 1180.6 624 99.5
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 0.0e+00 1173.7 624 97.9
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 0.0e+00 1119.4 631 94.3
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 0.0e+00 1117.4 630 94.4
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 0.0e+00 1114.0 627 95.1
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 0.0e+00 1114.0 627 95.1
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 3.2e-302 1041.2 629 89.2
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.9e-257 892.5 465 93.8
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 3.4e-227 792.0 628 67.4
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 2.0e-214 749.6 647 65.7
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 3.1e-212 742.3 645 63.1
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 2.2e-205 719.5 630 62.1
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 1.4e-204 716.8 626 62.3
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 7.0e-204 714.5 643 61.7
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 1.5e-201 706.8 646 61.1
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 1.9e-201 706.4 644 59.5
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 3.2e-201 705.7 642 59.7
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 4.2e-201 705.3 584 62.7
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 9.4e-201 704.1 626 64.5
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 1.4e-199 700.3 582 61.3
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 1.1e-198 697.2 640 61.4
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 5.3e-196 688.3 636 58.8
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 7.0e-196 688.0 648 59.3
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 1.2e-195 687.2 609 59.4
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.6e-195 686.8 638 58.9
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 2.0e-195 686.4 652 58.4
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 2.0e-195 686.4 634 59.8
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 1.7e-194 683.3 636 59.4
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 5.0e-194 681.8 620 60.6
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 1.0e-191 674.1 639 59.3
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 8.8e-191 671.0 634 56.0
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 9.8e-190 667.5 610 56.6
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 1.7e-189 666.8 635 59.2
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 8.3e-189 664.5 636 59.3
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 1.8e-188 663.3 631 57.5
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 7.0e-188 661.4 642 57.5
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 1.3e-186 657.1 625 57.6
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 1.7e-186 656.8 655 55.4
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 2.2e-186 656.4 637 57.8
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 2.9e-186 656.0 651 56.5
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 5.0e-186 655.2 620 57.6
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 5.0e-186 655.2 616 59.4
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 6.5e-186 654.8 605 57.9
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 1.5e-185 653.7 623 58.4
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 5.2e-183 645.2 633 55.1
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 1.5e-182 643.7 635 52.0
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 2.2e-181 639.8 638 53.9
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 2.2e-181 639.8 480 64.4
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 2.8e-181 639.4 486 62.8
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 4.9e-181 638.6 466 64.2
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 4.9e-181 638.6 687 53.3
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 1.4e-180 637.1 650 53.1
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 1.8e-180 636.7 624 55.0
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 5.4e-180 635.2 651 51.9
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 1.6e-179 633.6 633 55.6
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 4.5e-179 632.1 640 57.2
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 1.3e-178 630.6 634 55.0
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 1.7e-178 630.2 639 56.0
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.3e-178 629.8 602 58.0
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.3e-178 629.8 602 58.0
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 6.6e-178 628.2 637 53.4
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 1.5e-177 627.1 642 55.6
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 4.3e-177 625.5 645 53.0
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 4.3e-177 625.5 649 53.9
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 9.5e-177 624.4 651 54.4
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 1.2e-176 624.0 622 54.3
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 3.6e-176 622.5 632 52.7
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 1.0e-175 620.9 634 52.8
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 1.4e-175 620.5 641 53.5
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 3.0e-175 619.4 636 52.7
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 4.0e-175 619.0 491 60.9
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 5.2e-175 618.6 648 54.2
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 1.5e-174 617.1 485 60.6
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 3.4e-174 615.9 595 54.8
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 9.8e-174 614.4 641 54.1
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 4.9e-173 612.1 625 53.3
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 1.1e-172 610.9 630 54.1
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 1.4e-172 610.5 633 52.9
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 3.2e-172 609.4 639 50.2
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 9.2e-172 607.8 638 55.5
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 9.2e-172 607.8 619 52.3
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 2.7e-171 606.3 633 54.0
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 3.9e-170 602.4 627 52.5
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 5.0e-170 602.1 494 59.7
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 1.9e-169 600.1 651 52.8
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 6.2e-168 595.1 419 66.8
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 1.7e-165 587.0 625 51.0
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 1.0e-162 577.8 479 58.2
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 3.9e-162 575.9 636 53.5
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 1.2e-160 570.9 615 53.2
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 2.1e-160 570.1 589 52.3
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 1.1e-159 567.8 636 52.0
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 3.1e-159 566.2 510 56.7
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 3.1e-159 566.2 642 50.6
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 4.7e-152 542.3 543 55.4
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 8.6e-146 521.5 391 62.9
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 1.9e-145 520.4 623 48.8
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 3.2e-140 503.1 354 67.2
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 3.8e-133 479.6 633 48.3
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 3.4e-126 456.4 349 62.2
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 2.6e-118 430.3 489 45.8
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 3.2e-116 423.3 517 44.3
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 6.3e-112 409.1 448 48.0
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 7.6e-110 402.1 421 47.5
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 1.3e-109 401.4 535 44.5
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 5.7e-105 386.0 482 42.3
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 2.0e-81 307.8 520 35.0
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 8.0e-75 285.8 669 29.0
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 1.5e-57 228.4 457 33.3
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 4.6e-46 190.3 486 26.7
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 1.9e-39 168.3 401 28.7
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 1.8e-26 125.2 98 57.1
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 1.8e-26 125.2 98 57.1
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 1.3e-24 119.0 98 55.1
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 2.2e-16 91.7 261 24.5


User provided reference genes

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