Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G3758 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.1e-159 565.1 280 100.0
FAN11G1790 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.6e-158 562.0 280 99.3
FAN15G1785 Fragaria x ananassa HOM05D004516 ORTHO05D005194 7.5e-158 560.5 280 98.9
FAN24G2568 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.2e-157 558.9 280 98.9
FAN03G0371 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.9e-157 558.5 280 98.9
FAN03G3119 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.9e-157 557.8 280 98.6
FAN23G0994 Fragaria x ananassa HOM05D004516 ORTHO05D005194 8.3e-157 557.0 280 98.9
FAN09G3758 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.2e-156 555.1 280 98.2
FAN05G4935 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.4e-150 534.6 280 96.1
FvH4_3g44301 Fragaria vesca HOM05D004516 ORTHO05D005194 7.0e-148 527.3 279 92.8
FAN25G0689 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.1e-146 521.2 275 92.7
FAN13G0422 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.1e-145 520.0 275 93.1
FAN12G1193 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.3e-145 518.1 278 91.0
FAN23G1267 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.1e-143 513.5 278 91.0
FAN03G2899 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.7e-141 506.1 278 88.8
FAN07G1842 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.6e-139 498.0 275 89.5
FvH4_5g19180 Fragaria vesca HOM05D004516 ORTHO05D005194 2.4e-132 475.7 257 90.7
FvH4_6g21610 Fragaria vesca HOM05D004516 ORTHO05D005194 3.0e-130 468.8 258 89.9
FAN07G0029 Fragaria x ananassa HOM05D004516 ORTHO05D005194 9.9e-126 453.8 279 82.8
FAN13G1456 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.6e-120 436.4 278 78.8
FAN03G0909 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.6e-120 435.3 278 79.9
FAN10G0238 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.7e-115 419.1 275 78.9
FAN17G2263 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.6e-115 418.3 258 79.5
FAN10G1624 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.0e-114 417.2 258 79.1
FAN17G0177 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.9e-114 415.2 258 78.7
FAN09G1891 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.1e-114 414.8 258 78.7
FAN09G1624 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.5e-113 413.3 258 78.3
FAN15G2282 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.5e-113 413.3 258 77.9
FAN22G0748 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.5e-113 413.3 258 78.3
FAN10G1325 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.9e-113 412.9 258 78.3
FAN12G4265 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.6e-112 409.8 258 77.9
FAN22G1451 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.8e-112 408.3 278 76.6
FAN09G4587 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.5e-108 394.8 243 79.0
FAN02G2369 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.1e-106 388.3 258 77.5
FAN10G1093 Fragaria x ananassa HOM05D004516 ORTHO05D005194 8.7e-106 387.5 243 80.7
FAN16G1053 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.7e-104 382.1 278 72.7
FAN22G0239 Fragaria x ananassa HOM05D004516 ORTHO05D005194 7.6e-102 374.4 273 71.4
FAN24G2223 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.6e-96 356.7 258 70.9
FAN09G3769 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.9e-92 343.2 228 77.6
FAN24G3551 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.5e-92 342.8 278 66.2
FAN28G0122 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.6e-91 340.1 277 68.6
FAN23G1761 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.1e-91 338.2 175 98.3
FAN04G1692 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.4e-90 337.0 175 91.4
FAN19G1339 Fragaria x ananassa HOM05D004516 ORTHO05D005194 7.4e-89 331.3 353 54.1
FAN07G1174 Fragaria x ananassa HOM05D004516 ORTHO05D005194 9.7e-89 330.9 206 78.6
FAN21G3102 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.4e-87 326.2 278 64.0
FAN26G2540 Fragaria x ananassa HOM05D004516 ORTHO05D005194 7.2e-84 314.7 165 89.1
FAN16G1822 Fragaria x ananassa HOM05D004516 ORTHO05D005194 9.4e-84 314.3 231 73.6
RcHm_v2.0_Chr4g0392971 Rosa chinensis HOM05D004516 ORTHO05D005194 1.2e-83 313.9 231 65.4
FAN09G3014 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.0e-82 310.8 278 62.2
FAN15G0769 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.8e-82 310.1 278 62.9
FAN10G3675 Fragaria x ananassa HOM05D004516 ORTHO05D005194 9.7e-81 304.3 220 74.5
FAN15G3594 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.2e-80 303.1 182 84.1
FAN13G1629 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.6e-78 296.2 155 98.7
FAN07G0361 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.0e-77 294.3 180 82.2
FAN01G0148 Fragaria x ananassa HOM05D004516 ORTHO05D005194 8.5e-77 291.2 212 74.1
FAN13G2573 Fragaria x ananassa HOM05D004516 ORTHO05D000278 1.6e-75 287.0 160 90.0
FAN25G1657 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.8e-74 283.5 183 82.5
FAN10G0086 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.7e-74 281.6 200 75.0
FAN10G0672 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.7e-74 281.6 200 75.0
FAN10G4065 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.7e-74 281.6 200 75.0
FAN02G1419 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.1e-68 264.2 278 57.2
FAN01G1620 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.2e-65 254.2 171 75.4
FAN20G1447 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.8e-63 246.9 143 87.4
FAN10G0025 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.0e-62 243.4 256 57.0
FAN14G1051 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.2e-60 235.7 144 82.6
FAN28G0245 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.3e-53 213.4 156 75.0
FAN28G1213 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.3e-53 213.4 156 75.0
FvH4_6g22213 Fragaria vesca HOM05D004516 ORTHO05D005194 8.6e-53 211.5 99 98.0
FAN16G1376 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.0e-49 200.3 153 65.4
FAN28G2613 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.0e-49 200.3 99 93.9
FAN18G4542 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.4e-49 199.5 256 49.2
FAN07G2126 Fragaria x ananassa HOM05D004516 ORTHO05D005194 7.0e-47 191.8 107 82.2
RcHm_v2.0_Chr6g0305091 Rosa chinensis HOM05D004516 ORTHO05D005194 1.9e-44 183.7 274 39.1
FAN14G0839 Fragaria x ananassa HOM05D004516 ORTHO05D045680 1.6e-43 180.6 234 51.3
FAN19G1778 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.0e-42 177.9 273 39.2
FAN18G2686 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.2e-42 175.6 276 38.4
FAN03G2119 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.4e-41 172.6 276 38.0
FAN23G1219 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.8e-41 172.2 106 82.1
FAN02G1001 Fragaria x ananassa HOM05D004516 ORTHO05D005194 9.8e-41 171.4 273 36.6
FAN14G3645 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.2e-40 170.2 256 41.4
FAN05G3522 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.5e-38 162.9 123 73.2
FAN14G3153 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.5e-38 162.9 251 39.4
FAN01G1218 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.0e-38 162.2 276 37.0
FvH4_6g34882 Fragaria vesca HOM05D004516 ORTHO05D045680 3.9e-37 159.5 234 49.6
FAN11G1286 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.2e-35 154.5 250 37.6
FAN09G1164 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.1e-34 149.8 273 34.8
FAN11G2926 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.0e-34 149.4 217 40.6
RcHm_v2.0_Chr5g0059411 Rosa chinensis HOM05D004516 ORTHO05D005194 2.6e-33 146.7 178 43.8
FAN05G0424 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.2e-32 143.7 82 84.1
FAN20G1866 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.4e-31 141.0 85 85.9
FAN28G0111 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.9e-31 140.6 89 80.9
FAN11G3115 Fragaria x ananassa HOM05D004516 ORTHO05D005194 7.1e-31 138.7 203 38.9
FAN06G1918 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.6e-30 137.5 213 38.5
FAN14G5934 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.6e-30 136.0 233 36.5
FAN25G0220 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.3e-29 133.7 217 39.6
FAN14G3922 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.1e-29 132.5 251 34.7
FAN27G0566 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.3e-28 129.8 175 47.4
FAN17G2411 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.8e-27 126.7 269 33.1
FAN03G2498 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.7e-27 125.9 76 84.2
FAN25G3605 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.7e-27 125.9 217 37.3
FAN11G3175 Fragaria x ananassa HOM05D004516 ORTHO05D005194 8.9e-26 121.7 179 42.5
FAN02G1389 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.2e-25 121.3 176 39.2
FAN16G0942 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.5e-25 120.9 168 38.1
FAN16G1746 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.4e-25 119.8 199 35.7
FAN25G0543 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.4e-25 119.8 272 33.8
FAN02G2246 Fragaria x ananassa HOM05D004516 ORTHO05D005194 8.4e-24 115.2 205 38.0
FAN02G0941 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.1e-23 114.8 197 35.0
FAN04G1458 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.4e-23 113.6 84 76.2
FAN16G0694 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.2e-23 113.2 84 75.0
FAN28G1425 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.5e-22 109.8 175 36.0
FAN03G2654 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.0e-22 109.0 62 80.6
FAN08G1224 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.7e-21 107.5 201 37.8
FAN22G0207 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.7e-19 99.4 142 40.1
FAN24G3026 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.4e-17 92.8 101 42.6
FAN25G3465 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.9e-15 87.4 182 34.6
FAN06G0871 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.2e-15 86.3 182 35.2
FvH4_6g33100 Fragaria vesca HOM05D004516 ORTHO05D005194 1.6e-14 84.3 100 42.0
RcHm_v2.0_Chr7g0242211 Rosa chinensis HOM05D004516 ORTHO05D005194 2.1e-14 84.0 64 67.2
FAN05G4879 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.7e-14 83.6 92 41.3
FAN07G0140 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.7e-14 83.6 115 37.4
FAN01G2695 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.0e-14 82.4 258 28.7
FAN07G1082 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.0e-13 81.6 195 29.2
FAN25G0522 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.0e-13 81.6 157 31.2
FAN10G2421 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.7e-13 80.9 258 28.7
Hma1.2p1_0921F.1_g236870 Hydrangea macrophylla HOM05D001576 ORTHO05D010219 3.9e-13 79.7 297 26.9
FAN16G0564 Fragaria x ananassa HOM05D004516 ORTHO05D005194 8.7e-13 78.6 153 38.6
Aqoxy3G01274 Aquilegia oxysepala HOM05D001576 ORTHO05D005194 1.5e-12 77.8 124 37.1
FAN05G4797 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.3e-12 76.6 111 39.6
Prupe.4G233800 Prunus persica HOM05D004516 ORTHO05D005194 3.3e-12 76.6 190 30.5
FAN03G2067 Fragaria x ananassa HOM05D004516 ORTHO05D005194 9.6e-12 75.1 149 30.2
FAN23G1492 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.3e-11 74.7 39 84.6
FAN12G3538 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.1e-10 71.6 113 40.7
FAN12G3269 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.8e-10 70.9 67 50.7
TWI38G0149 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 1.8e-10 70.9 170 31.8
FAN24G1619 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.4e-10 70.5 152 35.5
SGA_v2.0_scaffold176G39371 Striga asiatica HOM05D008413 ORTHO05D000401 2.4e-10 70.5 194 26.8
FAN05G4171 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.3e-10 69.3 142 33.8
Carub.0001s4114 Capsella rubella HOM05D000589 ORTHO05D000401 1.5e-09 67.8 196 29.1
FvH4_7g00330 Fragaria vesca HOM05D003861 ORTHO05D003172 3.4e-09 66.6 277 24.2
Atru.chr1.1934 Acer truncatum HOM05D008413 ORTHO05D000401 4.4e-09 66.2 229 23.1
CSS0008946 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.8e-09 65.9 256 27.0
FAN24G3296 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.8e-09 65.9 113 38.9
FAN25G2950 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.8e-09 65.9 243 27.6
MD02G1308300 Malus domestica HOM05D005145 ORTHO05D006062 5.8e-09 65.9 172 27.9
CSS0004599 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.6e-09 65.5 126 28.6
CSS0008814 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.3e-08 64.7 256 27.0
CSS0023642 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.3e-08 64.7 256 27.0
CSS0041053 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.3e-08 64.7 256 27.0
TWI34G0394 Tripterygium wilfordii HOM05D014549 ORTHO05D000401 1.7e-08 64.3 170 30.0
Atru.chr1.2141 Acer truncatum HOM05D008413 ORTHO05D000401 2.2e-08 63.9 221 24.4
CSS0011061 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.2e-08 63.9 251 27.1
FAN24G2122 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.2e-08 63.9 113 39.8
FAN26G1586 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.9e-08 63.5 128 26.6
Rhsim08G0115200 Rhododendron simsii HOM05D007743 ORTHO05D004645 2.9e-08 63.5 222 27.0
FAN09G0033 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.8e-08 63.2 128 26.6
FAN26G1874 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.8e-08 63.2 128 26.6
FAN05G2464 Fragaria x ananassa HOM05D007743 ORTHO05D004645 4.9e-08 62.8 128 26.6
PSO384G2190 Papaver somniferum HOM05D008413 ORTHO05D000401 6.4e-08 62.4 117 28.2
FAN08G2971 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.4e-07 61.2 128 25.8
FvH4_5g34730 Fragaria vesca HOM05D003861 ORTHO05D003172 1.9e-07 60.8 277 23.8
Rhsim03G0135600 Rhododendron simsii HOM05D001576 ORTHO05D010219 2.4e-07 60.5 277 23.8
CSS0049636 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.2e-07 60.1 126 27.0
FvH4_2g02401 Fragaria vesca HOM05D007743 ORTHO05D010219 4.2e-07 59.7 129 26.4
FAN25G0014 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.1e-07 58.9 252 26.6
Carub.0008s0718 Capsella rubella HOM05D000589 ORTHO05D000401 9.3e-07 58.5 199 25.6
FAN15G0265 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.2e-06 58.2 83 39.8
FAN18G3027 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-06 58.2 241 24.9
FAN05G4694 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.7e-06 57.0 196 27.0
FAN21G3184 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.6e-06 56.2 95 38.9


User provided reference genes

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