Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G3705 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.7e-108 396.0 193 100.0
FAN06G4288 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.7e-108 396.0 193 100.0
FvH4_7g29600 Fragaria vesca HOM05D005367 ORTHO05D006328 8.7e-105 383.6 214 90.2
FAN10G4254 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.3e-95 353.2 213 84.5
FAN10G3657 Fragaria x ananassa HOM05D005367 ORTHO05D006328 5.3e-86 321.2 213 79.8
FAN03G1577 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.1e-80 303.5 219 73.1
RcHm_v2.0_Chr1g0377581 Rosa chinensis HOM05D005367 ORTHO05D006328 8.2e-63 244.2 202 65.3
MD01G1202200 Malus domestica HOM05D005367 ORTHO05D006328 3.7e-23 112.5 230 40.4
Prupe.2G295600 Prunus persica HOM05D005367 ORTHO05D006328 1.9e-22 110.2 114 54.4
Ciclev10021865m.g Citrus clementina HOM05D005367 ORTHO05D006328 1.1e-17 94.4 213 35.2
COL.COLO4_12698 Corchorus olitorius HOM05D005367 ORTHO05D006328 5.2e-17 92.0 166 36.1
Atru.chr5.466 Acer truncatum HOM05D005367 ORTHO05D006328 5.8e-16 88.6 151 37.1
Cpa.g.sc18.245 Carica papaya HOM05D005367 ORTHO05D006328 5.8e-16 88.6 219 34.2
Gohir.D08G152300 Gossypium hirsutum HOM05D005367 ORTHO05D006328 7.5e-16 88.2 162 38.9
Ciclev10006075m.g Citrus clementina HOM05D005367 ORTHO05D006328 9.8e-16 87.8 147 37.4
QL09p013904 Quercus lobata HOM05D005367 ORTHO05D006328 9.8e-16 87.8 211 36.0
Prupe.2G167900 Prunus persica HOM05D005367 ORTHO05D006328 1.7e-15 87.0 197 33.0
Gohir.A08G130800 Gossypium hirsutum HOM05D005367 ORTHO05D006328 2.9e-15 86.3 165 36.4
Duzib133G0249 Durio zibethinus HOM05D005367 ORTHO05D006328 3.7e-15 85.9 147 39.5
Dinv43805 Davidia involucrata HOM05D005367 ORTHO05D006328 8.3e-15 84.7 191 33.5
Gorai.004G158200 Gossypium raimondii HOM05D005367 ORTHO05D006328 8.3e-15 84.7 180 36.7
Atru.chr1.440 Acer truncatum HOM05D005367 ORTHO05D006328 1.4e-14 84.0 209 33.0
Cc02_g37850 Coffea canephora HOM05D005367 ORTHO05D006328 1.4e-14 84.0 194 28.9
Potri.002G158500 Populus trichocarpa HOM05D005367 ORTHO05D006328 1.4e-14 84.0 157 35.7
GSVIVG01026893001 Vitis vinifera HOM05D005367 ORTHO05D006328 5.4e-14 82.0 165 35.2
Potri.014G082600 Populus trichocarpa HOM05D005367 ORTHO05D006328 7.1e-14 81.6 171 32.7
Manes.06G148200 Manihot esculenta HOM05D005367 ORTHO05D006328 9.2e-14 81.3 166 38.6
Gohir.A11G088100 Gossypium hirsutum HOM05D005367 ORTHO05D006328 1.2e-13 80.9 162 36.4
MD07G1139200 Malus domestica HOM05D005367 ORTHO05D006328 1.2e-13 80.9 210 31.0
Nn1g01501 Nelumbo nucifera HOM05D005367 ORTHO05D006328 1.6e-13 80.5 176 33.5
TAR636G2389 Trochodendron aralioides HOM05D003133 ORTHO05D003642 2.1e-13 80.1 215 31.6
Ah.05g180710 Amaranthus hybridus HOM05D005367 ORTHO05D006328 2.7e-13 79.7 188 33.5
TWI14G0016 Tripterygium wilfordii HOM05D005367 ORTHO05D006328 2.7e-13 79.7 198 30.3
Thecc.01G360700 Theobroma cacao HOM05D005367 ORTHO05D006328 3.5e-13 79.3 167 36.5
TWI59G0064 Tripterygium wilfordii HOM05D005367 ORTHO05D006328 4.6e-13 79.0 159 32.7
MD01G1057500 Malus domestica HOM05D005367 ORTHO05D006328 6.0e-13 78.6 198 31.3
Oeu056369.1 Olea europaea HOM05D005367 ORTHO05D006328 6.0e-13 78.6 150 36.0
Gorai.007G098700 Gossypium raimondii HOM05D005367 ORTHO05D006328 7.8e-13 78.2 211 33.2
Lj1g0004821 Lotus japonicus HOM05D005367 ORTHO05D006328 7.8e-13 78.2 201 32.8
CSS0033809 Camellia sinensis var. sinensis HOM05D005367 ORTHO05D006328 1.3e-12 77.4 174 34.5
Gohir.D11G092400 Gossypium hirsutum HOM05D005367 ORTHO05D006328 1.3e-12 77.4 211 33.2
MSTRG.20826 Avicennia marina HOM05D005367 ORTHO05D006328 3.0e-12 76.3 162 35.2
Ca_07909_v3 Cicer arietinum L. HOM05D005367 ORTHO05D006328 3.0e-12 76.3 163 35.0
ClCG06G003800 Citrullus lanatus HOM05D005367 ORTHO05D006328 3.0e-12 76.3 196 29.1
Hma1.2p1_0001F.1_g001380 Hydrangea macrophylla HOM05D005367 ORTHO05D006328 3.9e-12 75.9 191 30.9
Actinidia20916 Actinidia chinensis HOM05D005367 ORTHO05D006328 5.1e-12 75.5 149 35.6
EL10Ac1g00429 Beta vulgaris HOM05D005367 ORTHO05D006328 5.1e-12 75.5 195 30.8
DCAR_010300 Daucus carota HOM05D005367 ORTHO05D006328 5.1e-12 75.5 163 34.4
VMungo1383G2792 Vigna mungo HOM05D005367 ORTHO05D006328 5.1e-12 75.5 150 34.7
Atru.chr1.441 Acer truncatum HOM05D005367 ORTHO05D006328 6.6e-12 75.1 169 35.5
RcHm_v2.0_Chr1g0355051 Rosa chinensis HOM05D005367 ORTHO05D006328 6.6e-12 75.1 168 31.0
CANSAT56G3377 Cannabis sativa HOM05D005367 ORTHO05D006328 8.6e-12 74.7 167 32.9
Cfa003939 Carpinus fangiana HOM05D005367 ORTHO05D006328 8.6e-12 74.7 210 29.0
Glyma.18G231900 Glycine max HOM05D005367 ORTHO05D006328 8.6e-12 74.7 176 30.7
HanXRQChr16g0522831 Helianthus annuus HOM05D005367 ORTHO05D006328 8.6e-12 74.7 168 33.3
Sed0017642 Sechium edule HOM05D005367 ORTHO05D006328 8.6e-12 74.7 164 31.7
Sc01g0003360 Simmondsia chinensis HOM05D005367 ORTHO05D006328 8.6e-12 74.7 174 35.1
CiPaw.02G029900 Carya illinoinensis HOM05D005367 ORTHO05D006328 1.1e-11 74.3 176 27.8
Lalb_Chr24g0401631 Lupinus albus HOM05D005367 ORTHO05D006328 1.1e-11 74.3 163 31.9
arahy.Tifrunner.gnm1.ann1.G5US7K Arachis hypogaea HOM05D005367 ORTHO05D006328 1.9e-11 73.6 160 33.8
Hund16930 Selenicereus undatus HOM05D005367 ORTHO05D006328 1.9e-11 73.6 207 31.9
arahy.Tifrunner.gnm1.ann1.D8DQXR Arachis hypogaea HOM05D005367 ORTHO05D006328 2.5e-11 73.2 160 33.8
Haze_15487 Corylus avellana HOM05D005367 ORTHO05D006328 2.5e-11 73.2 206 29.1
Manes.01G258500 Manihot esculenta HOM05D005367 ORTHO05D006328 2.5e-11 73.2 152 32.9
Lalb_Chr01g0011531 Lupinus albus HOM05D005367 ORTHO05D006328 3.3e-11 72.8 163 31.3
RcHm_v2.0_Chr1g0354801 Rosa chinensis HOM05D005367 ORTHO05D006328 3.3e-11 72.8 169 29.6
THA.LOC104801446 Tarenaya hassleriana HOM05D005367 ORTHO05D006328 3.3e-11 72.8 160 34.4
Eucgr.E00158 Eucalyptus grandis HOM05D005367 ORTHO05D006328 4.3e-11 72.4 149 34.2
PSO478G0766 Papaver somniferum HOM05D005367 ORTHO05D006328 4.3e-11 72.4 213 29.1
FvH4_7g14150 Fragaria vesca HOM05D005367 ORTHO05D006328 5.6e-11 72.0 176 32.4
PGR031G3282 Punica granatum HOM05D005367 ORTHO05D006328 5.6e-11 72.0 160 35.6
CSS0040093 Camellia sinensis var. sinensis HOM05D005367 ORTHO05D006328 7.3e-11 71.6 205 31.2
FAN01G2456 Fragaria x ananassa HOM05D005367 ORTHO05D006328 7.3e-11 71.6 181 32.6
FAN06G0563 Fragaria x ananassa HOM05D005367 ORTHO05D006328 7.3e-11 71.6 176 32.4
QL08p049031 Quercus lobata HOM05D005367 ORTHO05D006328 7.3e-11 71.6 157 31.2
TAR375G0799 Trochodendron aralioides HOM05D005367 ORTHO05D006328 7.3e-11 71.6 209 31.1
Duzib205G1257 Durio zibethinus HOM05D005367 ORTHO05D006328 9.5e-11 71.2 191 30.4
MELO3C021217.2 Cucumis melo HOM05D005367 ORTHO05D006328 1.2e-10 70.9 201 28.4
SGA_v2.0_scaffold11G05663 Striga asiatica HOM05D000368 ORTHO05D006328 1.2e-10 70.9 155 32.9
Eucgr.D02282 Eucalyptus grandis HOM05D005367 ORTHO05D006328 1.6e-10 70.5 206 27.7
FAN10G0042 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.6e-10 70.5 183 32.8
SalBow3G2019 Salvia bowleyana HOM05D005367 ORTHO05D006328 2.1e-10 70.1 148 35.1
PSO782G1827 Papaver somniferum HOM05D005367 ORTHO05D006328 2.8e-10 69.7 209 28.7
Migut.B01742 Erythranthe guttata HOM05D005367 ORTHO05D006328 4.7e-10 68.9 169 30.2
vmacro13291 Vaccinium macrocarpon HOM05D005367 ORTHO05D006328 4.7e-10 68.9 161 34.8
Manes.05G036200 Manihot esculenta HOM05D005367 ORTHO05D006328 6.2e-10 68.6 161 31.1
FAN03G1221 Fragaria x ananassa HOM05D005367 ORTHO05D006328 8.1e-10 68.2 183 32.8
Lj9A582T87 Lonicera japonica HOM05D005367 ORTHO05D006328 1.1e-09 67.8 191 30.4
PGR042G0868 Punica granatum HOM05D005367 ORTHO05D006328 1.1e-09 67.8 143 33.6
TPR.G37815 Trifolium pratense HOM05D005367 ORTHO05D006328 1.4e-09 67.4 165 31.5
Nn6g33454 Nelumbo nucifera HOM05D005367 ORTHO05D006328 1.8e-09 67.0 212 29.2
VMungo1383G2823 Vigna mungo HOM05D005367 ORTHO05D006328 1.8e-09 67.0 164 32.3
Sabra14G0059900 Salix brachista HOM05D005367 ORTHO05D006328 2.3e-09 66.6 116 37.9
Nitab4.5_0008050g0010 Nicotiana tabacum HOM05D005367 ORTHO05D006328 3.1e-09 66.2 188 27.1
Phvul.008G065800 Phaseolus vulgaris HOM05D005367 ORTHO05D006328 3.1e-09 66.2 147 31.3
Sopen05g028210 Solanum pennellii HOM05D005367 ORTHO05D006328 5.2e-09 65.5 213 28.6
Aqoxy7G00339 Aquilegia oxysepala HOM05D005367 ORTHO05D006328 6.8e-09 65.1 160 30.6
ECA234G3275 Erigeron canadensis HOM05D005367 ORTHO05D006328 6.8e-09 65.1 168 31.0
Lsat_1_v5_gn_4_36280 Lactuca sativa HOM05D005367 ORTHO05D006328 6.8e-09 65.1 175 32.6
Nitab4.5_0001702g0150 Nicotiana tabacum HOM05D005367 ORTHO05D006328 6.8e-09 65.1 164 29.3
AUR62004342 Chenopodium quinoa HOM05D005367 ORTHO05D006328 8.9e-09 64.7 143 31.5
vmacro06668 Vaccinium macrocarpon HOM05D005367 ORTHO05D006328 8.9e-09 64.7 197 30.5
CsaV3_6G000470 Cucumis sativus L. HOM05D005367 ORTHO05D006328 1.2e-08 64.3 192 26.0
PGSC0003DMG400021656 Solanum tuberosum HOM05D005367 ORTHO05D006328 1.5e-08 63.9 193 28.0
Thhalv10008538m.g Eutrema salsugineum HOM05D005367 ORTHO05D006328 2.0e-08 63.5 178 28.1
Solyc05g049880.3 Solanum lycopersicum HOM05D005367 ORTHO05D006328 2.6e-08 63.2 193 28.5
BraA09t42260Z Brassica rapa HOM05D005367 ORTHO05D006328 4.4e-08 62.4 150 27.3
unitig_61.g26388 Utricularia gibba HOM05D005367 ORTHO05D006328 4.4e-08 62.4 159 29.6
Carub.0001s0048 Capsella rubella HOM05D005367 ORTHO05D006328 7.6e-08 61.6 153 27.5
Psat3g109400 Pisum sativum HOM05D005367 ORTHO05D006328 7.6e-08 61.6 184 31.0
C08p53830 Brassica napus HOM05D006991 ORTHO05D009188 9.9e-08 61.2 148 29.7
BolC8t52897H Brassica oleracea HOM05D000368 ORTHO05D000289 9.9e-08 61.2 148 29.7
Sp1g00570 Schrenkiella parvula HOM05D005367 ORTHO05D006328 9.9e-08 61.2 156 29.5
AUR62022549 Chenopodium quinoa HOM05D005367 ORTHO05D006328 1.3e-07 60.8 45 57.8
AL1G10610 Arabidopsis lyrata HOM05D005367 ORTHO05D006328 1.7e-07 60.5 203 26.6
Peaxi162Scf00191g01425 Petunia axillaris HOM05D005367 ORTHO05D006328 4.9e-07 58.9 161 28.6
COL.COLO4_14330 Corchorus olitorius HOM05D005367 ORTHO05D006328 6.4e-07 58.5 37 62.2
FAN10G1555 Fragaria x ananassa HOM05D005367 ORTHO05D006328 8.4e-07 58.2 37 62.2
HPP92_027620 Vanilla planifolia HOM05D005367 ORTHO05D006328 8.4e-07 58.2 165 26.1
DCAR_000242 Daucus carota HOM05D005367 ORTHO05D006328 1.1e-06 57.8 46 56.5
HPP92_022052 Vanilla planifolia HOM05D005367 ORTHO05D006328 1.1e-06 57.8 165 26.1
AT1G01730 Arabidopsis thaliana HOM05D005367 ORTHO05D006328 2.4e-06 56.6 193 25.9
CARHR000590 Cardamine hirsuta HOM05D005367 ORTHO05D006328 4.1e-06 55.8 33 66.7
MD01G1056800 Malus domestica HOM05D005367 ORTHO05D006328 4.1e-06 55.8 43 55.8
Potri.015G145000 Populus trichocarpa HOM05D005367 ORTHO05D006328 4.1e-06 55.8 34 64.7
Aa31LG1G11110 Aethionema arabicum HOM05D005367 ORTHO05D006328 5.4e-06 55.5 33 66.7


User provided reference genes

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