Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G3448 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.8e-116 421.4 194 100.0
FAN05G1577 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.1e-113 411.0 194 97.4
FvH4_5g36660 Fragaria vesca HOM05D006059 ORTHO05D010613 1.1e-112 409.8 194 97.9
FAN08G2764 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.5e-112 409.5 194 96.9
FAN24G0852 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.3e-112 407.9 193 97.4
FAN13G2711 Fragaria x ananassa HOM05D006059 ORTHO05D010613 7.4e-112 407.1 194 96.4
FAN14G4872 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.8e-111 405.2 194 96.9
FAN25G1404 Fragaria x ananassa HOM05D006059 ORTHO05D010613 8.1e-111 403.7 194 95.9
FAN05G4633 Fragaria x ananassa HOM05D006059 ORTHO05D003448 1.4e-110 402.9 194 95.9
FAN10G0384 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.1e-110 401.7 194 95.9
FvH4_5g09320 Fragaria vesca HOM05D006059 ORTHO05D010613 1.0e-108 396.7 214 88.3
FAN14G0222 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.8e-108 394.8 194 94.3
FAN14G3910 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.1e-105 384.4 248 76.2
FAN09G4425 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.5e-104 382.9 210 86.7
FAN14G0698 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.3e-104 381.3 257 73.2
FAN03G0148 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.6e-103 379.4 248 75.0
FvH4_5g18320 Fragaria vesca HOM05D006059 ORTHO05D010613 3.7e-103 378.3 248 75.4
FAN10G1186 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.7e-103 378.3 194 91.8
FAN16G3677 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.1e-102 375.2 246 74.8
FAN10G0957 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.2e-101 373.2 194 90.2
FAN18G2462 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.6e-98 361.3 248 73.8
FAN27G3382 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.5e-96 355.5 174 96.0
FAN28G0623 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.3e-95 353.2 194 86.1
FAN09G3528 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.4e-91 337.0 231 71.9
FAN06G3421 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.1e-90 334.3 231 73.2
FAN05G2008 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.8e-87 324.7 152 96.7
FAN14G1746 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.3e-84 316.6 235 70.6
FAN06G3209 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.2e-84 315.8 194 79.9
FAN06G3983 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-78 296.2 203 74.9
FAN27G1348 Fragaria x ananassa HOM05D006059 ORTHO05D208487 2.2e-68 262.7 119 97.5
FAN18G1513 Fragaria x ananassa HOM05D006059 ORTHO05D199500 3.2e-67 258.8 119 95.8
FAN12G1838 Fragaria x ananassa HOM05D006059 ORTHO05D199365 2.0e-61 239.6 110 93.6
FAN08G0085 Fragaria x ananassa HOM05D006059 ORTHO05D200711 2.9e-52 209.1 107 86.0
FAN06G1974 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.0e-52 208.4 231 51.9
FAN06G0639 Fragaria x ananassa HOM05D006059 ORTHO05D010613 7.5e-48 194.5 163 61.3
FAN06G4655 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.5e-43 177.6 99 82.8
FAN03G2752 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.9e-35 153.3 79 93.7
FAN03G3436 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.5e-35 152.9 133 63.2
FAN02G0790 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.6e-35 151.8 152 57.9
FAN10G3573 Fragaria x ananassa HOM05D006059 ORTHO05D019147 5.6e-35 151.8 141 60.3
FAN13G2239 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.6e-35 151.8 152 57.9
FAN01G0864 Fragaria x ananassa HOM05D006059 ORTHO05D019147 7.3e-35 151.4 79 91.1
FAN16G0265 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.5e-35 151.0 152 57.9
FAN18G2895 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.1e-34 149.8 79 91.1
FAN05G2015 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.8e-34 149.4 78 91.0
FAN12G1586 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.7e-34 148.7 153 56.2
FAN05G3127 Fragaria x ananassa HOM05D006059 ORTHO05D208470 1.1e-33 147.5 81 88.9
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 1.4e-33 147.1 149 56.4
FAN11G1312 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-33 146.7 133 60.9
FAN14G4965 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.8e-32 141.7 82 87.8
FvH4_6g18410 Fragaria vesca HOM05D006059 ORTHO05D010613 1.1e-30 137.5 134 59.0
FAN14G3214 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.7e-29 132.9 77 83.1
FAN07G2379 Fragaria x ananassa HOM05D006059 ORTHO05D019147 1.5e-24 117.1 63 88.9
FAN11G2691 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.9e-24 114.4 134 51.5
FvH4_5g36190 Fragaria vesca HOM05D006059 ORTHO05D046011 1.6e-21 107.1 136 47.1
FAN12G1423 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.6e-16 89.7 79 63.3
FAN10G4265 Fragaria x ananassa HOM05D006059 ORTHO05D022634 7.6e-16 88.2 79 63.3
FAN18G3353 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.2e-15 86.7 79 62.0
FAN09G3980 Fragaria x ananassa HOM05D006059 ORTHO05D022634 3.8e-15 85.9 79 60.8
FAN11G1542 Fragaria x ananassa HOM05D006059 ORTHO05D210510 4.9e-15 85.5 79 60.8
FAN19G3119 Fragaria x ananassa HOM05D006059 ORTHO05D022634 4.9e-15 85.5 75 62.7
FAN25G3455 Fragaria x ananassa HOM05D006059 ORTHO05D207604 4.9e-15 85.5 79 60.8
FvH4_6g02080 Fragaria vesca HOM05D006059 ORTHO05D022634 6.4e-15 85.1 79 60.8
FAN02G0158 Fragaria x ananassa HOM05D006059 ORTHO05D207876 6.4e-15 85.1 79 60.8
FAN03G3178 Fragaria x ananassa HOM05D006059 ORTHO05D022634 2.4e-14 83.2 79 59.5
FAN06G2872 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.2e-14 82.8 79 59.5
FAN25G3073 Fragaria x ananassa HOM05D006059 ORTHO05D022634 5.4e-14 82.0 79 59.5
FAN27G2436 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.3e-14 81.3 79 58.2
FvH4_3g36310 Fragaria vesca HOM05D006059 ORTHO05D000610 2.7e-13 79.7 78 56.4
RcHm_v2.0_Chr5g0057351 Rosa chinensis HOM05D006059 ORTHO05D010613 4.6e-13 79.0 84 50.0
FvH4_6g48101 Fragaria vesca HOM05D006059 ORTHO05D198592 1.0e-12 77.8 81 54.3
RcHm_v2.0_Chr7g0227101 Rosa chinensis HOM05D006059 ORTHO05D010613 2.3e-12 76.6 84 48.8
RcHm_v2.0_Chr2g0161601 Rosa chinensis HOM05D006059 ORTHO05D010613 8.7e-12 74.7 84 47.6
FvH4_6g37922 Fragaria vesca HOM05D006059 ORTHO05D010613 7.3e-11 71.6 64 60.9
FAN17G1384 Fragaria x ananassa HOM05D006059 ORTHO05D201010 2.1e-10 70.1 75 57.3
RcHm_v2.0_Chr6g0279821 Rosa chinensis HOM05D006059 ORTHO05D010613 3.6e-10 69.3 77 45.5
FAN05G3551 Fragaria x ananassa HOM05D006059 ORTHO05D202697 1.8e-09 67.0 59 59.3
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 5.3e-09 65.5 71 53.5
FAN05G3510 Fragaria x ananassa HOM05D006059 ORTHO05D203405 5.8e-08 62.0 62 58.1
FAN05G0344 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.4e-07 58.5 47 57.4
FAN11G3819 Fragaria x ananassa HOM05D006059 ORTHO05D209325 6.4e-07 58.5 65 50.8
FAN21G0235 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.4e-06 57.4 84 44.0
RcHm_v2.0_Chr2g0116941 Rosa chinensis HOM05D021305 ORTHO05D010102 3.2e-06 56.2 66 45.5
FAN05G3916 Fragaria x ananassa HOM05D006059 ORTHO05D203515 4.2e-06 55.8 48 43.8
FAN24G2449 Fragaria x ananassa HOM05D006059 ORTHO05D207803 5.4e-06 55.5 53 58.5
RcHm_v2.0_Chr4g0417091 Rosa chinensis HOM05D013926 ORTHO05D344408 5.4e-06 55.5 62 50.0
FAN06G0190 Fragaria x ananassa HOM05D006059 ORTHO05D200130 9.3e-06 54.7 21 95.2


User provided reference genes

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