Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G3443 Fragaria x ananassa HOM05D013146 ORTHO05D004092 3.0e-252 874.8 474 100.0
FvH4_7g29480 Fragaria vesca HOM05D013146 ORTHO05D004092 2.0e-248 862.1 476 97.9
FAN10G2986 Fragaria x ananassa HOM05D013146 ORTHO05D004092 4.3e-238 827.8 475 96.0
FAN10G2376 Fragaria x ananassa HOM05D013146 ORTHO05D004092 8.9e-236 820.1 475 95.6
FAN03G0039 Fragaria x ananassa HOM05D013146 ORTHO05D004092 8.4e-210 733.8 517 78.1
FAN03G0716 Fragaria x ananassa HOM05D013146 ORTHO05D004092 3.2e-209 731.9 517 77.8
FAN01G1221 Fragaria x ananassa HOM05D013146 ORTHO05D004092 9.8e-142 507.7 477 65.0
RcHm_v2.0_Chr1g0377291 Rosa chinensis HOM05D013146 ORTHO05D004092 8.6e-138 494.6 543 59.1
FAN06G2021 Fragaria x ananassa HOM05D013146 ORTHO05D004092 1.1e-129 467.6 488 59.8
FAN06G1386 Fragaria x ananassa HOM05D013146 ORTHO05D004092 3.4e-126 456.1 488 59.4
RcHm_v2.0_Chr1g0377331 Rosa chinensis HOM05D013146 ORTHO05D004092 2.8e-120 436.4 531 57.4
FvH4_7g29491 Fragaria vesca HOM05D013146 ORTHO05D004092 2.9e-45 187.2 115 87.0
MD01G1201000 Malus domestica HOM05D004189 ORTHO05D004092 1.5e-28 131.7 274 38.0
Gohir.D12G259100 Gossypium hirsutum HOM05D004189 ORTHO05D004092 2.0e-22 111.3 480 32.5
Gohir.A12G257800 Gossypium hirsutum HOM05D004189 ORTHO05D004092 1.9e-20 104.8 484 32.0
Cc03_g07610 Coffea canephora HOM05D004189 ORTHO05D004092 3.3e-20 104.0 183 42.1
COL.COLO4_14310 Corchorus olitorius HOM05D004189 ORTHO05D004092 1.0e-18 99.0 166 45.8
Gorai.008G277500 Gossypium raimondii HOM05D004189 ORTHO05D004092 4.0e-18 97.1 480 32.3
TAR374G0772 Trochodendron aralioides HOM05D004189 ORTHO05D004092 5.2e-18 96.7 191 41.4
Sc19g0001510 Simmondsia chinensis HOM05D004189 ORTHO05D004092 8.9e-18 95.9 488 32.0
Nitab4.5_0000716g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 1.5e-17 95.1 249 34.5
Prupe.2G294400 Prunus persica HOM05D004189 ORTHO05D004092 5.8e-17 93.2 583 26.4
Potri.012G141300 Populus trichocarpa HOM05D004189 ORTHO05D004092 1.1e-15 89.0 491 29.5
Sabra15G0153700 Salix brachista HOM05D004189 ORTHO05D004092 1.9e-15 88.2 465 30.5
MD07G1268800 Malus domestica HOM05D004189 ORTHO05D004092 4.1e-15 87.0 213 35.2
vmacro06681 Vaccinium macrocarpon HOM05D004189 ORTHO05D004092 2.7e-14 84.3 216 35.6
Oeu024223.1 Olea europaea HOM05D004189 ORTHO05D004092 1.7e-13 81.6 205 37.6
TWI23G0464 Tripterygium wilfordii HOM05D004189 ORTHO05D004092 8.6e-13 79.3 226 35.4
Duzib205G0656 Durio zibethinus HOM05D004189 ORTHO05D004092 1.5e-12 78.6 159 39.0
ECA233G5127 Erigeron canadensis HOM05D004189 ORTHO05D004092 2.5e-12 77.8 464 26.3
Nitab4.5_0009681g0010 Nicotiana tabacum HOM05D004189 ORTHO05D004092 2.5e-12 77.8 217 33.6
ECA238G1803 Erigeron canadensis HOM05D004189 ORTHO05D004092 4.3e-12 77.0 150 35.3
CSS0002108 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 5.6e-12 76.6 159 42.1
Lsat_1_v5_gn_8_8621 Lactuca sativa HOM05D004189 ORTHO05D004092 7.3e-12 76.3 237 32.5
QL09p014192 Quercus lobata HOM05D004189 ORTHO05D004092 9.5e-12 75.9 180 36.7
Sopen03g004620 Solanum pennellii HOM05D004189 ORTHO05D004092 1.6e-11 75.1 162 38.3
Actinidia34113 Actinidia chinensis HOM05D004189 ORTHO05D004092 2.1e-11 74.7 205 35.6
CSS0007027 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 3.6e-11 73.9 227 35.7
Nn6g33499 Nelumbo nucifera HOM05D004189 ORTHO05D004092 4.7e-11 73.6 169 37.9
PGSC0003DMG400014293 Solanum tuberosum HOM05D004189 ORTHO05D004092 4.7e-11 73.6 334 29.3
Manes.06G147200 Manihot esculenta HOM05D004189 ORTHO05D004092 1.4e-10 72.0 278 29.9
GSVIVG01028976001 Vitis vinifera HOM05D004189 ORTHO05D004092 1.8e-10 71.6 274 31.0
Ciclev10004574m.g Citrus clementina HOM05D004189 ORTHO05D004092 3.1e-10 70.9 230 34.3
Peaxi162Scf00444g00847 Petunia axillaris HOM05D004189 ORTHO05D004092 1.2e-09 68.9 478 31.6
CiPaw.03G106300 Carya illinoinensis HOM05D004189 ORTHO05D004092 1.5e-09 68.6 441 26.5
Migut.F01119 Erythranthe guttata HOM05D004189 ORTHO05D004092 2.0e-09 68.2 151 36.4
Nn1g01463 Nelumbo nucifera HOM05D004189 ORTHO05D004092 2.0e-09 68.2 200 36.5
Solyc03g025810.4 Solanum lycopersicum HOM05D004189 ORTHO05D004092 5.8e-09 66.6 492 27.6
Cpa.g.sc107.53 Carica papaya HOM05D004189 ORTHO05D004092 1.7e-08 65.1 178 35.4
ClCG09G012920 Citrullus lanatus HOM05D004189 ORTHO05D004092 2.2e-08 64.7 174 33.3
Migut.F00339 Erythranthe guttata HOM05D004189 ORTHO05D004092 2.9e-08 64.3 111 44.1
CAN.G490.32 Capsicum annuum HOM05D004189 ORTHO05D004092 3.7e-08 63.9 169 34.9
QL09p014207 Quercus lobata HOM05D004189 ORTHO05D004092 3.7e-08 63.9 191 33.0
EL10Ac3g05642 Beta vulgaris HOM05D004189 ORTHO05D004092 4.9e-08 63.5 295 30.2
AUR62015982 Chenopodium quinoa HOM05D004189 ORTHO05D004092 1.9e-07 61.6 177 32.2
Lj8A24G36 Lonicera japonica HOM05D004189 ORTHO05D004092 1.9e-07 61.6 87 48.3
PSO782G0005 Papaver somniferum HOM05D004189 ORTHO05D004092 3.2e-07 60.8 184 34.2
Glyma.16G189900 Glycine max HOM05D004189 ORTHO05D004092 4.1e-07 60.5 82 43.9
arahy.Tifrunner.gnm1.ann1.EQ3RBX Arachis hypogaea HOM05D004189 ORTHO05D004092 7.0e-07 59.7 66 48.5
AUR62021191 Chenopodium quinoa HOM05D004189 ORTHO05D004092 7.0e-07 59.7 170 34.7
Lsat_1_v5_gn_2_132020 Lactuca sativa HOM05D004189 ORTHO05D004092 9.2e-07 59.3 142 31.7
CANSAT21G0752 Cannabis sativa HOM05D004189 ORTHO05D004092 1.6e-06 58.5 524 28.1
Cfa008320 Carpinus fangiana HOM05D004189 ORTHO05D004092 3.5e-06 57.4 58 53.4
MELO3C003321.2 Cucumis melo HOM05D004189 ORTHO05D004092 6.0e-06 56.6 152 36.8
Eucgr.A02790 Eucalyptus grandis HOM05D004189 ORTHO05D004092 6.0e-06 56.6 296 28.4
Lalb_Chr19g0130831 Lupinus albus HOM05D004189 ORTHO05D004092 6.0e-06 56.6 145 34.5
arahy.Tifrunner.gnm1.ann1.E2ZRS1 Arachis hypogaea HOM05D004189 ORTHO05D004092 7.8e-06 56.2 66 47.0
Hund11746 Selenicereus undatus HOM05D004189 ORTHO05D004092 7.8e-06 56.2 420 25.0


User provided reference genes

Program Settings