Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.4e-184 648.7 323 100.0
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.9e-182 641.3 323 99.4
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 1.1e-179 633.3 323 98.8
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 2.3e-142 509.2 279 91.8
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.8e-139 499.6 326 82.8
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.1e-125 453.8 310 78.4
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.6e-119 432.2 277 80.9
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 1.3e-116 423.7 277 78.0
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 1.3e-113 413.7 277 76.2
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 1.9e-112 409.8 280 74.3
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 7.2e-112 407.9 200 99.5
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 3.6e-111 405.6 277 74.7
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 4.7e-111 405.2 277 74.7
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 4.7e-111 405.2 284 73.9
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 7.9e-111 404.4 279 75.6
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 1.4e-110 403.7 277 74.0
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 1.8e-110 403.3 277 74.0
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 1.5e-109 400.2 278 74.1
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 7.4e-109 397.9 283 72.4
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 9.7e-109 397.5 280 74.3
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 9.7e-109 397.5 279 73.8
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 9.7e-109 397.5 280 73.6
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 2.2e-108 396.4 279 74.2
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 2.2e-108 396.4 280 73.9
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 6.3e-108 394.8 263 77.6
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 1.8e-107 393.3 278 73.7
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 1.8e-107 393.3 276 73.2
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 4.1e-107 392.1 287 70.7
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 4.1e-107 392.1 280 72.5
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 5.3e-107 391.7 277 72.9
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 5.3e-107 391.7 281 71.2
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 1.6e-106 390.2 278 71.2
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 1.6e-106 390.2 282 72.7
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 2.0e-106 389.8 284 72.9
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 3.5e-106 389.0 285 69.1
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 4.5e-106 388.7 282 72.0
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 7.7e-106 387.9 282 71.6
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 1.7e-105 386.7 278 72.7
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 2.5e-104 382.9 279 71.7
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 7.2e-104 381.3 280 70.4
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 1.6e-103 380.2 279 71.0
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 1.6e-103 380.2 311 66.6
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 4.7e-103 378.6 289 68.2
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 4.7e-103 378.6 287 68.6
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 6.1e-103 378.3 280 70.4
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 6.1e-103 378.3 278 68.3
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 8.0e-103 377.9 281 70.5
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 1.4e-102 377.1 280 70.4
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 8.8e-102 374.4 281 69.4
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 1.5e-101 373.6 230 80.0
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 2.6e-101 372.9 284 69.7
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 4.4e-101 372.1 280 68.9
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 4.4e-101 372.1 281 69.0
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 4.4e-101 372.1 282 69.1
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 5.7e-101 371.7 279 68.8
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 1.7e-100 370.2 269 71.4
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 4.8e-100 368.6 302 65.9
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 8.2e-100 367.9 275 69.8
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 1.8e-99 366.7 286 68.5
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 3.1e-99 365.9 200 86.5
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 4.1e-99 365.5 282 67.0
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 5.3e-99 365.2 286 67.8
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 7.0e-99 364.8 282 68.4
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 7.0e-99 364.8 278 67.6
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 9.1e-99 364.4 280 68.2
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 1.2e-98 364.0 270 70.0
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 2.0e-98 363.2 279 67.7
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 5.9e-98 361.7 267 70.0
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 5.9e-98 361.7 269 69.1
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 1.3e-97 360.5 273 69.6
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 1.7e-97 360.1 304 64.8
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 2.2e-97 359.8 286 67.8
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 5.0e-97 358.6 269 68.0
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 2.5e-96 356.3 280 67.5
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 2.5e-96 356.3 280 67.5
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 9.4e-96 354.4 269 68.4
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 9.4e-96 354.4 201 83.6
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 1.2e-95 354.0 225 77.3
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 1.2e-95 354.0 225 77.3
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 2.1e-95 353.2 200 84.5
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 2.1e-95 353.2 282 66.0
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 6.1e-95 351.7 282 66.7
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 6.1e-95 351.7 278 66.9
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 1.5e-93 347.1 284 67.3
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 3.4e-93 345.9 201 82.1
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 2.8e-92 342.8 207 81.2
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 3.7e-92 342.4 235 72.3
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 4.8e-92 342.0 264 66.3
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 4.8e-92 342.0 280 63.6
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 8.3e-92 341.3 278 64.7
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 4.5e-90 335.5 205 78.0
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 7.7e-90 334.7 282 62.8
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 8.6e-89 331.3 204 78.4
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 2.5e-88 329.7 248 66.1
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 6.1e-87 325.1 233 71.7
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 5.7e-85 318.5 226 70.8
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 8.3e-84 314.7 214 72.9
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 1.3e-81 307.4 178 83.1
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 5.6e-80 302.0 266 60.5
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 8.0e-79 298.1 199 72.9
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 1.8e-78 297.0 248 60.9
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 5.2e-78 295.4 222 70.3
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 2.2e-76 290.0 221 66.1
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 3.6e-71 272.7 285 55.4
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 8.0e-71 271.6 155 83.9
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 1.1e-70 271.2 217 65.0
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 5.2e-70 268.9 194 69.6
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 9.8e-69 264.6 237 60.3
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 3.7e-68 262.7 241 60.2
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 8.6e-65 251.5 212 60.8
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 3.6e-63 246.1 157 75.2
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 3.4e-61 239.6 220 59.5
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 1.7e-60 237.3 204 59.3
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 2.5e-56 223.4 268 46.3
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 2.0e-53 213.8 203 54.2
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 9.2e-51 204.9 116 80.2
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 6.2e-47 192.2 114 78.9
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 1.2e-45 188.0 178 62.4
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.2e-37 161.4 201 47.3
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.5e-24 117.9 70 74.3
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 4.0e-22 109.8 184 38.6
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 1.0e-09 68.6 61 62.3
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 6.3e-07 59.3 34 73.5


User provided reference genes

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