Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G3184 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.1e-114 416.8 228 100.0
FAN06G2140 Fragaria x ananassa HOM05D008847 ORTHO05D000368 4.2e-114 414.8 228 99.6
FAN03G0347 Fragaria x ananassa HOM05D008847 ORTHO05D000368 9.3e-106 387.1 228 95.6
FAN01G0010 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.7e-75 286.6 215 72.6
FAN05G2544 Fragaria x ananassa HOM05D008847 ORTHO05D016304 2.6e-47 193.0 251 48.6
FvH4_7g25361 Fragaria vesca HOM05D008847 ORTHO05D000368 3.5e-44 182.6 247 48.6
FAN06G2118 Fragaria x ananassa HOM05D008847 ORTHO05D016304 3.5e-44 182.6 247 48.6
FvH4_6g44020 Fragaria vesca HOM05D008847 ORTHO05D000368 7.0e-37 158.3 250 42.8
FAN10G0027 Fragaria x ananassa HOM05D008847 ORTHO05D000368 4.4e-31 139.0 126 61.9
FAN03G1143 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.3e-22 110.9 122 55.7
RcHm_v2.0_Chr2g0167641 Rosa chinensis HOM05D000576 ORTHO05D000368 2.9e-22 109.8 201 39.8
RcHm_v2.0_Chr3g0476161 Rosa chinensis HOM05D000576 ORTHO05D000368 4.9e-22 109.0 193 40.9
RcHm_v2.0_Chr2g0167551 Rosa chinensis HOM05D000576 ORTHO05D000368 1.9e-21 107.1 193 39.9
RcHm_v2.0_Chr5g0008761 Rosa chinensis HOM05D008847 ORTHO05D045484 4.1e-21 105.9 251 34.7
RcHm_v2.0_Chr2g0167601 Rosa chinensis HOM05D000576 ORTHO05D000368 2.7e-20 103.2 193 39.4
FAN09G3608 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.9e-19 99.4 193 36.8
FvH4_6g47821 Fragaria vesca HOM05D000576 ORTHO05D000368 8.6e-19 98.2 199 37.2
FAN06G5009 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.1e-18 97.8 207 39.6
FvH4_6g44041 Fragaria vesca HOM05D008847 ORTHO05D000368 1.5e-18 97.4 110 50.9
FAN14G2376 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.5e-18 96.7 199 38.2
FAN03G0578 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.6e-17 94.0 205 38.5
RcHm_v2.0_Chr2g0168251 Rosa chinensis HOM05D000576 ORTHO05D000368 2.1e-17 93.6 193 36.3
RcHm_v2.0_Chr5g0047501 Rosa chinensis HOM05D008847 ORTHO05D000368 2.1e-17 93.6 207 36.7
FAN05G2407 Fragaria x ananassa HOM05D000576 ORTHO05D000368 6.2e-17 92.0 193 36.8
FvH4_7g27481 Fragaria vesca HOM05D008847 ORTHO05D000368 2.3e-16 90.1 207 38.2
FAN06G0982 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.3e-16 90.1 205 38.0
FAN06G2289 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.3e-16 90.1 205 38.0
FAN10G0882 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.3e-16 90.1 205 37.6
FAN14G4345 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.4e-15 86.3 165 38.2
FvH4_6g48330 Fragaria vesca HOM05D008847 ORTHO05D000368 1.7e-14 84.0 160 38.1
FAN09G4808 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.2e-14 83.6 193 33.2
FvH4_6g48431 Fragaria vesca HOM05D008847 ORTHO05D000368 2.9e-14 83.2 133 42.9
RcHm_v2.0_Chr2g0166621 Rosa chinensis HOM05D000576 ORTHO05D000368 2.9e-14 83.2 199 34.7
FAN01G2751 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.6e-12 77.4 204 37.3
FAN06G1177 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.5e-12 76.3 238 32.8
FAN25G2043 Fragaria x ananassa HOM05D000477 ORTHO05D000338 6.0e-12 75.5 69 60.9
FAN02G1311 Fragaria x ananassa HOM05D008847 ORTHO05D000368 6.6e-11 72.0 130 38.5
FvH4_6g48151 Fragaria vesca HOM05D000576 ORTHO05D000368 8.6e-11 71.6 178 33.7
Potri.017G092301 Populus trichocarpa HOM05D008175 ORTHO05D000368 1.1e-10 71.2 176 33.5
FvH4_3g09170 Fragaria vesca HOM05D008847 ORTHO05D016304 2.5e-10 70.1 133 39.8
CSS0031751 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 3.3e-10 69.7 203 30.5
Sabra17G0081300 Salix brachista HOM05D000576 ORTHO05D000368 2.1e-09 67.0 179 31.8
FAN05G4147 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.6e-09 66.2 142 34.5
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 6.2e-09 65.5 110 41.8
Prupe.3G259300 Prunus persica HOM05D008847 ORTHO05D000368 8.1e-09 65.1 201 32.3
TPR.G7001 Trifolium pratense HOM05D009500 ORTHO05D000368 1.2e-07 61.2 175 29.7
FAN02G4373 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.5e-07 60.8 126 33.3
FAN15G1135 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.0e-07 60.5 75 45.3
RcHm_v2.0_Chr2g0167681 Rosa chinensis HOM05D008847 ORTHO05D000368 5.8e-07 58.9 104 40.4
TPR.G6942 Trifolium pratense HOM05D009500 ORTHO05D000368 3.7e-06 56.2 201 27.9
FAN09G3072 Fragaria x ananassa HOM05D001529 ORTHO05D000368 4.9e-06 55.8 189 28.6


User provided reference genes

Program Settings