Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G2923 Fragaria x ananassa HOM05D007333 ORTHO05D008874 9.7e-68 260.0 130 100.0
FAN03G1611 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.1e-66 256.5 130 98.5
FAN10G2394 Fragaria x ananassa HOM05D007333 ORTHO05D008874 3.5e-65 251.5 130 96.2
FAN01G0324 Fragaria x ananassa HOM05D007333 ORTHO05D008874 5.9e-65 250.8 130 96.2
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 1.7e-48 196.1 134 76.9
FvH4_7g06450 Fragaria vesca HOM05D007333 ORTHO05D008874 1.7e-43 179.5 90 96.7
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 7.3e-31 137.5 137 59.1
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 6.0e-25 117.9 143 49.0
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 2.5e-23 112.5 138 45.7
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 4.7e-22 108.2 134 46.3
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 4.0e-21 105.1 130 43.1
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 2.2e-19 99.4 135 43.0
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 3.8e-19 98.6 146 42.5
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 9.2e-18 94.0 113 42.5
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 9.2e-18 94.0 133 45.1
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 4.6e-17 91.7 139 38.1
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 7.8e-17 90.9 126 43.7
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 1.0e-16 90.5 126 43.7
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 1.7e-16 89.7 124 39.5
Sed0000251 Sechium edule HOM05D007333 ORTHO05D008874 1.7e-16 89.7 106 43.4
Duzib128G0626 Durio zibethinus HOM05D007333 ORTHO05D008874 6.6e-16 87.8 131 38.9
Sabra10G0181000 Salix brachista HOM05D007333 ORTHO05D008874 6.6e-16 87.8 163 37.4
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 8.7e-16 87.4 120 42.5
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 1.1e-15 87.0 124 42.7
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 1.1e-15 87.0 120 43.3
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 1.5e-15 86.7 139 37.4
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 2.5e-15 85.9 126 42.9
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 5.6e-15 84.7 156 37.8
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 5.6e-15 84.7 156 38.5
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 2.1e-14 82.8 144 38.2
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 2.1e-14 82.8 144 38.9
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 2.1e-14 82.8 143 37.1
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 4.8e-14 81.6 152 36.8
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 9.0e-13 77.4 141 36.9
Aa31LG10G7320 Aethionema arabicum HOM05D007333 ORTHO05D008874 1.5e-12 76.6 111 44.1
Ah.06g184540 Amaranthus hybridus HOM05D007333 ORTHO05D008874 1.5e-12 76.6 80 52.5
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 1.5e-12 76.6 143 35.7
Aqoxy2G01500 Aquilegia oxysepala HOM05D007333 ORTHO05D008874 2.0e-12 76.3 130 37.7
Lalb_Chr21g0313181 Lupinus albus HOM05D007333 ORTHO05D008874 2.6e-12 75.9 147 38.8
TAR633G0429 Trochodendron aralioides HOM05D007333 ORTHO05D008874 3.4e-12 75.5 130 36.9
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 4.4e-12 75.1 147 36.1
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 5.8e-12 74.7 114 38.6
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 5.8e-12 74.7 152 37.5
Carub.0005s1859 Capsella rubella HOM05D007333 ORTHO05D008874 2.2e-11 72.8 140 40.7
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 3.8e-11 72.0 120 35.0
QL04p040607 Quercus lobata HOM05D007333 ORTHO05D008874 4.9e-11 71.6 104 41.3
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 1.1e-10 70.5 124 33.9
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 1.1e-10 70.5 127 36.2
TPR.G2540 Trifolium pratense HOM05D007333 ORTHO05D008874 1.1e-10 70.5 144 38.2
AT3G52230 Arabidopsis thaliana HOM05D007333 ORTHO05D008874 1.9e-10 69.7 133 39.1
Thhalv10010807m.g Eutrema salsugineum HOM05D007333 ORTHO05D008874 1.9e-10 69.7 113 40.7
Glyma.10G201500 Glycine max HOM05D007333 ORTHO05D008874 1.9e-10 69.7 127 33.9
Ca_10485_v3 Cicer arietinum L. HOM05D007333 ORTHO05D008874 2.4e-10 69.3 143 37.8
AL5G32820 Arabidopsis lyrata HOM05D007333 ORTHO05D008874 4.2e-10 68.6 108 40.7
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 4.2e-10 68.6 137 33.6
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 9.3e-10 67.4 74 40.5
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 9.3e-10 67.4 136 33.8
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 1.2e-09 67.0 131 34.4
ECA233G0976 Erigeron canadensis HOM05D007333 ORTHO05D008874 1.6e-09 66.6 108 38.9
Lsat_1_v5_gn_8_23060 Lactuca sativa HOM05D007333 ORTHO05D008874 1.6e-09 66.6 69 46.4
MBI17_g20230_MAGBIO Magnolia biondii HOM05D007333 ORTHO05D008874 1.6e-09 66.6 71 52.1
Sp5g10030 Schrenkiella parvula HOM05D007333 ORTHO05D008874 1.6e-09 66.6 134 38.8
PGSC0003DMG402027350 Solanum tuberosum HOM05D007333 ORTHO05D008874 1.6e-09 66.6 119 35.3
Actinidia34782 Actinidia chinensis HOM05D007333 ORTHO05D008874 2.7e-09 65.9 119 38.7
BcaC07g39593 Brassica carinata HOM05D007333 ORTHO05D008874 2.7e-09 65.9 131 33.6
Actinidia38900 Actinidia chinensis HOM05D007333 ORTHO05D008874 3.5e-09 65.5 123 36.6
Glyma.20G188900 Glycine max HOM05D007333 ORTHO05D008874 6.0e-09 64.7 137 32.1
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 6.0e-09 64.7 110 35.5
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 7.8e-09 64.3 111 36.0
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 7.8e-09 64.3 70 37.1
Sc20g0001370 Simmondsia chinensis HOM05D007333 ORTHO05D008874 7.8e-09 64.3 110 34.5
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 1.0e-08 63.9 132 31.1
BraA09t39992Z Brassica rapa HOM05D007333 ORTHO05D008874 1.0e-08 63.9 116 36.2
SEGI_06473 Sequoiadendron giganteum HOM05D007333 ORTHO05D008874 1.3e-08 63.5 73 46.6
Oeu015044.1 Olea europaea HOM05D007333 ORTHO05D008874 1.7e-08 63.2 79 43.0
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 1.7e-08 63.2 76 43.4
vmacro10268 Vaccinium macrocarpon HOM05D007333 ORTHO05D008874 1.7e-08 63.2 91 41.8
A09p45290 Brassica napus HOM05D007333 ORTHO05D008874 2.3e-08 62.8 96 38.5
Medtr1g492600 Medicago truncatula HOM05D007333 ORTHO05D008874 2.3e-08 62.8 130 33.1
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 2.3e-08 62.8 135 33.3
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 2.3e-08 62.8 131 33.6
HanXRQChr14g0456271 Helianthus annuus HOM05D007333 ORTHO05D008874 3.9e-08 62.0 102 33.3
Phvul.007G105600 Phaseolus vulgaris HOM05D007333 ORTHO05D008874 5.1e-08 61.6 137 32.1
unitig_746.g26629 Utricularia gibba HOM05D007333 ORTHO05D008874 5.1e-08 61.6 78 41.0
VMungo0720G1448 Vigna mungo HOM05D007333 ORTHO05D008874 8.7e-08 60.8 143 33.6
Cfa011213 Carpinus fangiana HOM05D018442 ORTHO05D020347 1.1e-07 60.5 103 37.9
Medtr1g492630 Medicago truncatula HOM05D007333 ORTHO05D008874 1.5e-07 60.1 130 33.1
Solyc11g007680.2 Solanum lycopersicum HOM05D007333 ORTHO05D008874 1.5e-07 60.1 125 32.0
Sopen11g003540 Solanum pennellii HOM05D007333 ORTHO05D008874 1.5e-07 60.1 125 32.0
CARHR162000 Cardamine hirsuta HOM05D007333 ORTHO05D008874 2.5e-07 59.3 114 36.8
Oeu030485.1 Olea europaea HOM05D007333 ORTHO05D008874 7.3e-07 57.8 137 30.7
Haze_02631 Corylus avellana HOM05D007333 ORTHO05D008874 1.3e-06 57.0 132 32.6
ECA238G3189 Erigeron canadensis HOM05D007333 ORTHO05D008874 1.3e-06 57.0 108 31.5
A04p07130 Brassica napus HOM05D007333 ORTHO05D008874 8.1e-06 54.3 57 52.6


User provided reference genes

Program Settings