Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G2911 Fragaria x ananassa HOM05D007326 ORTHO05D009048 3.4e-50 201.4 108 100.0
FAN03G0879 Fragaria x ananassa HOM05D007326 ORTHO05D009048 7.9e-47 190.3 108 95.4
FAN01G1037 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.8e-30 136.0 108 74.1
FvH4_7g31800 Fragaria vesca HOM05D000354 ORTHO05D000717 6.7e-30 134.0 70 100.0
RcHm_v2.0_Chr1g0381021 Rosa chinensis HOM05D007326 ORTHO05D009048 2.5e-29 132.1 107 69.2
FAN10G1221 Fragaria x ananassa HOM05D007326 ORTHO05D009048 3.1e-27 125.2 104 74.0
FAN10G2940 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.5e-26 122.9 104 73.1
Prupe.2G311900 Prunus persica HOM05D007326 ORTHO05D009048 8.8e-14 80.5 110 51.8
TPR.G14875 Trifolium pratense HOM05D007326 ORTHO05D009048 5.3e-11 71.2 113 44.2
Atru.chr1.147 Acer truncatum HOM05D007326 ORTHO05D009048 1.2e-10 70.1 109 46.8
Haze_14278 Corylus avellana HOM05D007326 ORTHO05D009048 5.9e-10 67.8 112 43.8
Sed0023316 Sechium edule HOM05D007326 ORTHO05D009048 1.0e-09 67.0 113 44.2
vmacro06547 Vaccinium macrocarpon HOM05D007326 ORTHO05D009048 2.2e-09 65.9 113 45.1
Gohir.A11G014200 Gossypium hirsutum HOM05D007326 ORTHO05D009048 2.9e-09 65.5 116 47.4
VMungo0464G1195 Vigna mungo HOM05D007326 ORTHO05D009048 3.8e-09 65.1 91 48.4
ClCG01G000490 Citrullus lanatus HOM05D007326 ORTHO05D009048 5.0e-09 64.7 109 44.0
Glyma.07G086800 Glycine max HOM05D007326 ORTHO05D009048 6.5e-09 64.3 94 50.0
Gohir.D11G014400 Gossypium hirsutum HOM05D007326 ORTHO05D009048 6.5e-09 64.3 116 46.6
Gorai.007G014800 Gossypium raimondii HOM05D007326 ORTHO05D009048 6.5e-09 64.3 116 46.6
Glyma.09G190100 Glycine max HOM05D007326 ORTHO05D009048 8.5e-09 63.9 106 45.3
ECA232G0297 Erigeron canadensis HOM05D007326 ORTHO05D009048 2.5e-08 62.4 106 42.5
Oeu037093.1 Olea europaea HOM05D007326 ORTHO05D009048 2.5e-08 62.4 105 42.9
Rhsim09G0011500 Rhododendron simsii HOM05D007326 ORTHO05D009048 2.5e-08 62.4 115 43.5
TAR629G0302 Trochodendron aralioides HOM05D007326 ORTHO05D009048 2.5e-08 62.4 125 39.2
Psat0s2030g0040 Pisum sativum HOM05D007326 ORTHO05D009048 3.2e-08 62.0 111 45.0
COL.COLO4_03426 Corchorus olitorius HOM05D007326 ORTHO05D009048 5.5e-08 61.2 84 53.6
PGR042G3637 Punica granatum HOM05D007326 ORTHO05D009048 2.1e-07 59.3 103 39.8
Potri.015G017700 Populus trichocarpa HOM05D007326 ORTHO05D009048 2.7e-07 58.9 111 38.7
Rhsim03G0206100 Rhododendron simsii HOM05D043765 ORTHO05D009048 2.7e-07 58.9 84 44.0
CsaV3_5G000570 Cucumis sativus L. HOM05D007326 ORTHO05D009048 4.7e-07 58.2 111 44.1
Rhsim03G0207100 Rhododendron simsii HOM05D043765 ORTHO05D009048 4.7e-07 58.2 84 44.0
Ciclev10006260m.g Citrus clementina HOM05D007326 ORTHO05D009048 1.0e-06 57.0 106 45.3
Lalb_Chr05g0213391 Lupinus albus HOM05D007326 ORTHO05D009048 1.0e-06 57.0 96 47.9
Actinidia06160 Actinidia chinensis HOM05D007326 ORTHO05D009048 2.3e-06 55.8 77 49.4
MSTRG.55 Avicennia marina HOM05D007326 ORTHO05D009048 2.3e-06 55.8 110 42.7
Manes.06G159200 Manihot esculenta HOM05D007326 ORTHO05D009048 2.3e-06 55.8 116 37.9
ATR0037G036 Amborella trichopoda HOM05D007326 ORTHO05D009048 3.0e-06 55.5 79 45.6
arahy.Tifrunner.gnm1.ann1.8E5M3M Arachis hypogaea HOM05D007326 ORTHO05D009048 4.0e-06 55.1 95 47.4
SGA_v2.0_scaffold55G19762 Striga asiatica HOM05D007326 ORTHO05D009048 4.0e-06 55.1 113 38.9
Duzib205G1092 Durio zibethinus HOM05D007326 ORTHO05D009048 5.2e-06 54.7 110 42.7
unitig_8.g3560 Utricularia gibba HOM05D000146 ORTHO05D000178 5.2e-06 54.7 82 41.5


User provided reference genes

Program Settings