Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G2876 Fragaria x ananassa HOM05D007737 ORTHO05D009754 5.3e-66 254.2 128 100.0
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 2.1e-46 189.1 167 61.7
FAN10G0020 Fragaria x ananassa HOM05D007737 ORTHO05D009754 2.7e-46 188.7 181 57.5
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 7.7e-41 170.6 80 100.0
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 5.3e-34 147.9 80 83.8
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 4.5e-25 118.2 75 72.0
ClCG06G000750 Citrullus lanatus HOM05D007737 ORTHO05D009754 5.0e-24 114.8 88 61.4
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 6.7e-21 104.4 75 65.3
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 2.8e-19 99.0 77 58.4
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 1.1e-18 97.1 85 60.0
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 1.4e-18 96.7 67 67.2
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 1.8e-18 96.3 75 57.3
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 1.2e-17 93.6 68 60.3
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 2.6e-17 92.4 75 60.0
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 4.5e-17 91.7 71 62.0
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 4.5e-17 91.7 80 56.2
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 5.9e-17 91.3 78 59.0
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 5.9e-17 91.3 87 50.6
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 7.7e-17 90.9 76 55.3
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 7.7e-17 90.9 76 55.3
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 1.0e-16 90.5 70 58.6
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 1.3e-16 90.1 65 63.1
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 1.7e-16 89.7 75 54.7
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 1.7e-16 89.7 77 55.8
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 2.2e-16 89.4 76 52.6
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 6.5e-16 87.8 81 55.6
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 6.5e-16 87.8 71 54.9
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 6.5e-16 87.8 74 56.8
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 8.5e-16 87.4 80 48.8
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 1.1e-15 87.0 70 58.6
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 1.5e-15 86.7 81 54.3
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 1.9e-15 86.3 83 51.8
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 2.5e-15 85.9 76 59.2
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 9.4e-15 84.0 82 51.2
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 9.4e-15 84.0 78 51.3
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 1.6e-14 83.2 81 54.3
Sopen06g017020 Solanum pennellii HOM05D007737 ORTHO05D009754 2.1e-14 82.8 65 58.5
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 2.7e-14 82.4 81 53.1
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 4.7e-14 81.6 65 56.9
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 6.1e-14 81.3 72 51.4
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 1.0e-13 80.5 83 51.8
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 1.0e-13 80.5 54 63.0
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 4.0e-13 78.6 82 48.8
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 6.8e-13 77.8 49 65.3
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 1.5e-12 76.6 40 72.5
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 1.5e-12 76.6 76 51.3
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 2.6e-12 75.9 64 54.7
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 3.4e-12 75.5 80 43.8
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 7.5e-12 74.3 75 49.3
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 7.5e-12 74.3 80 42.5
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 9.8e-12 73.9 80 42.5
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 1.7e-11 73.2 53 60.4
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 2.8e-11 72.4 77 44.2
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 3.7e-11 72.0 57 59.6
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 4.8e-11 71.6 47 63.8
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 8.3e-11 70.9 61 59.0
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 1.1e-10 70.5 57 61.4
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 1.4e-10 70.1 65 50.8
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 2.4e-10 69.3 80 41.2
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 2.4e-10 69.3 61 52.5
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 2.4e-10 69.3 51 62.7
HPP92_007269 Vanilla planifolia HOM05D007737 ORTHO05D009754 3.1e-10 68.9 58 50.0
Os04g0589200 Oryza sativa ssp. japonica HOM05D007737 ORTHO05D009754 9.1e-10 67.4 80 41.2
Mapoly0099s0043 Marchantia polymorpha HOM05D007737 ORTHO05D009754 1.2e-09 67.0 40 62.5
Nitab4.5_0000507g0110 Nicotiana tabacum HOM05D007737 ORTHO05D009754 1.2e-09 67.0 78 41.0
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 5.9e-09 64.7 65 49.2
Prupe.2G111200 Prunus persica HOM05D007737 ORTHO05D009754 2.9e-08 62.4 36 69.4
AUR62013808 Chenopodium quinoa HOM05D007737 ORTHO05D009754 3.8e-08 62.0 46 54.3
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 5.0e-08 61.6 67 44.8
HPP92_007265 Vanilla planifolia HOM05D007737 ORTHO05D009754 3.2e-07 58.9 48 50.0
MELO3C022466.2 Cucumis melo HOM05D007737 ORTHO05D009754 1.2e-06 57.0 68 44.1
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 1.6e-06 56.6 116 32.8
THA.LOC104806480 Tarenaya hassleriana HOM05D007737 ORTHO05D009754 1.6e-06 56.6 74 40.5


User provided reference genes

Program Settings