Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.8e-88 329.3 174 100.0
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 5.6e-87 324.3 174 98.9
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.9e-82 309.3 175 95.4
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 5.8e-76 287.7 165 95.2
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 1.1e-66 256.9 175 86.3
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 8.0e-33 144.4 169 56.8
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 7.5e-31 137.9 161 57.8
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 1.7e-30 136.7 161 53.4
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 2.8e-30 136.0 156 57.1
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 2.8e-30 136.0 161 55.9
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 4.8e-30 135.2 122 64.8
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 4.8e-30 135.2 161 53.4
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 8.3e-30 134.4 161 52.2
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 4.1e-29 132.1 159 52.2
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 5.4e-29 131.7 161 57.8
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 9.1e-29 131.0 158 54.4
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 1.6e-28 130.2 194 48.5
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 2.0e-28 129.8 125 66.4
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 2.7e-28 129.4 167 51.5
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 4.5e-28 128.6 161 51.6
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 5.9e-28 128.3 158 53.8
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 5.9e-28 128.3 163 50.3
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 1.7e-27 126.7 126 61.9
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 2.3e-27 126.3 115 64.3
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 8.6e-27 124.4 113 63.7
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 1.1e-26 124.0 169 52.7
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 2.5e-26 122.9 162 54.9
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 5.5e-26 121.7 114 64.9
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 7.2e-26 121.3 142 53.5
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 9.5e-26 120.9 157 52.9
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 9.5e-26 120.9 162 51.2
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 2.1e-25 119.8 156 54.5
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 2.8e-25 119.4 157 52.2
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 3.6e-25 119.0 112 59.8
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 4.7e-25 118.6 161 46.6
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 1.8e-24 116.7 160 51.2
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 4.0e-24 115.5 159 50.3
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 5.2e-24 115.2 125 57.6
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 8.9e-24 114.4 162 43.8
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 1.2e-23 114.0 155 51.0
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 3.4e-23 112.5 158 53.2
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 3.4e-23 112.5 162 48.1
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 4.4e-23 112.1 158 51.9
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 4.4e-23 112.1 117 60.7
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 5.7e-23 111.7 125 54.4
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 3.7e-22 109.0 161 48.4
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 3.7e-22 109.0 157 47.1
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 6.3e-22 108.2 158 48.7
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 6.3e-22 108.2 112 60.7
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 2.4e-21 106.3 141 51.8
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 2.4e-21 106.3 158 50.6
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 4.1e-21 105.5 114 58.8
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 5.4e-21 105.1 165 46.7
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 5.4e-21 105.1 175 44.0
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 7.0e-21 104.8 113 58.4
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 7.0e-21 104.8 113 58.4
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 9.2e-21 104.4 117 54.7
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 9.2e-21 104.4 143 49.0
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 9.2e-21 104.4 161 47.8
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.2e-20 104.0 124 53.2
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 1.2e-20 104.0 162 46.9
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.6e-20 103.6 160 46.9
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 2.0e-20 103.2 108 60.2
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 3.8e-19 99.0 136 51.5
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 5.0e-19 98.6 161 46.6
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 3.3e-18 95.9 125 52.8
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 4.3e-18 95.5 125 52.8
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 7.3e-18 94.7 118 50.8
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 1.2e-17 94.0 117 51.3
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 2.1e-17 93.2 133 48.1
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 2.1e-17 93.2 163 42.9
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 4.7e-17 92.0 125 48.0
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 8.0e-17 91.3 117 50.4
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 8.0e-17 91.3 117 52.1
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 1.4e-16 90.5 160 45.0
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 1.8e-16 90.1 108 54.6
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 1.8e-16 90.1 116 50.0
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 8.9e-16 87.8 118 50.8
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 1.5e-15 87.0 140 45.0
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 1.5e-15 87.0 189 39.2
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 3.4e-15 85.9 154 44.2
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 5.8e-15 85.1 189 38.6
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 7.5e-15 84.7 114 50.9
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 1.7e-14 83.6 114 47.4
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 4.9e-14 82.0 158 38.6
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 1.8e-13 80.1 123 44.7
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 1.8e-13 80.1 118 45.8
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 7.0e-13 78.2 139 41.0
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 6.0e-12 75.1 151 40.4
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 1.0e-11 74.3 88 50.0
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 3.0e-11 72.8 120 41.7
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 8.6e-11 71.2 145 40.0
BolC8t52551H Brassica oleracea HOM05D001466 ORTHO05D001452 8.0e-09 64.7 120 36.7
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 6.8e-08 61.6 111 41.4
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.0e-07 60.1 125 36.8
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 2.6e-07 59.7 48 60.4
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 7.5e-07 58.2 132 36.4
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.2e-06 56.6 148 31.8
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 3.7e-06 55.8 147 33.3


User provided reference genes

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