Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G2837 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.8e-159 565.8 274 100.0
FAN06G0647 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.2e-149 530.8 260 98.8
FvH4_7g12363 Fragaria vesca HOM05D002400 ORTHO05D002568 4.1e-132 474.9 233 99.1
FvH4_6g05280 Fragaria vesca HOM05D002400 ORTHO05D002568 7.0e-84 314.7 260 64.6
FAN14G3389 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.0e-83 313.2 260 64.2
FAN14G5637 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.8e-83 311.2 260 63.8
FAN05G2337 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.0e-82 308.5 259 64.1
FAN09G3427 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.6e-73 278.5 253 61.7
FAN05G0221 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.8e-72 276.2 253 60.9
FvH4_6g33902 Fragaria vesca HOM05D002400 ORTHO05D002568 2.6e-70 269.6 250 60.4
FAN14G5260 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.9e-69 265.4 251 59.4
FvH4_6g22710 Fragaria vesca HOM05D002400 ORTHO05D002568 6.4e-69 265.0 249 59.8
FAN09G4054 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.4e-68 263.1 226 62.8
FAN14G2794 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.1e-68 262.3 249 59.4
FAN05G0305 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.3e-49 198.4 255 47.1
MD14G1025800 Malus domestica HOM05D002400 ORTHO05D002568 3.0e-42 176.4 252 41.7
FAN02G2515 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.4e-41 171.8 147 61.9
RcHm_v2.0_Chr3g0474091 Rosa chinensis HOM05D002400 ORTHO05D002568 9.6e-41 171.4 246 41.9
RcHm_v2.0_Chr3g0481121 Rosa chinensis HOM05D002400 ORTHO05D002568 3.1e-39 166.4 258 39.9
MD14G1026300 Malus domestica HOM05D002400 ORTHO05D002568 6.9e-39 165.2 242 43.4
RcHm_v2.0_Chr7g0205961 Rosa chinensis HOM05D002400 ORTHO05D002568 1.5e-38 164.1 268 39.9
Prupe.7G108600 Prunus persica HOM05D002400 ORTHO05D002568 7.6e-38 161.8 247 41.3
RcHm_v2.0_Chr7g0205891 Rosa chinensis HOM05D002400 ORTHO05D002568 1.7e-37 160.6 274 40.5
RcHm_v2.0_Chr3g0473911 Rosa chinensis HOM05D002400 ORTHO05D002568 6.4e-37 158.7 245 42.0
MD14G1026400 Malus domestica HOM05D002400 ORTHO05D002568 3.2e-36 156.4 240 43.3
FvH4_5g26410 Fragaria vesca HOM05D002400 ORTHO05D002568 1.2e-35 154.5 253 38.7
FAN18G2424 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.1e-35 153.7 253 38.3
RcHm_v2.0_Chr3g0474001 Rosa chinensis HOM05D002400 ORTHO05D002568 7.9e-35 151.8 238 38.7
MD14G1024100 Malus domestica HOM05D002400 ORTHO05D002568 1.8e-34 150.6 217 42.9
FvH4_5g20530 Fragaria vesca HOM05D002400 ORTHO05D002568 2.3e-34 150.2 247 40.1
FAN18G4571 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.1e-34 149.1 247 40.9
MD00G1221800 Malus domestica HOM05D002400 ORTHO05D002568 8.7e-34 148.3 243 39.5
MD04G1058800 Malus domestica HOM05D002400 ORTHO05D002568 1.1e-33 147.9 234 41.5
FAN18G1895 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.9e-33 147.1 223 42.6
FAN05G4159 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.3e-33 146.0 247 40.1
FvH4_6g19010 Fragaria vesca HOM05D002400 ORTHO05D002568 5.6e-33 145.6 238 38.2
RcHm_v2.0_Chr3g0474031 Rosa chinensis HOM05D002400 ORTHO05D002568 7.4e-33 145.2 250 39.2
MD14G1157200 Malus domestica HOM05D002400 ORTHO05D002568 3.7e-32 142.9 263 40.7
FvH4_6g18920 Fragaria vesca HOM05D002400 ORTHO05D002568 4.8e-32 142.5 250 38.0
FvH4_6g19030 Fragaria vesca HOM05D002400 ORTHO05D002568 4.8e-32 142.5 250 38.0
FvH4_6g19020 Fragaria vesca HOM05D002400 ORTHO05D002568 1.4e-31 141.0 244 36.5
FAN14G3084 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.4e-31 141.0 231 38.1
MD14G1025300 Malus domestica HOM05D002400 ORTHO05D002568 1.4e-31 141.0 243 40.7
MD14G1026600 Malus domestica HOM05D002400 ORTHO05D002568 1.4e-31 141.0 241 38.6
RcHm_v2.0_Chr3g0475391 Rosa chinensis HOM05D002400 ORTHO05D002568 1.8e-31 140.6 257 36.2
FAN02G4410 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.1e-31 139.8 249 37.3
FAN14G2096 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.1e-31 139.8 249 37.3
MD14G1025100 Malus domestica HOM05D002400 ORTHO05D002568 5.3e-31 139.0 219 38.4
Prupe.2G052100 Prunus persica HOM05D002400 ORTHO05D002568 6.9e-31 138.7 226 40.7
FAN14G4887 Fragaria x ananassa HOM05D002400 ORTHO05D002568 9.0e-31 138.3 243 36.2
FAN09G2665 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-30 137.9 238 36.1
FAN05G4425 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.5e-30 137.5 238 36.1
MD14G1026700 Malus domestica HOM05D002400 ORTHO05D002568 2.0e-30 137.1 276 37.0
RcHm_v2.0_Chr3g0474171 Rosa chinensis HOM05D002400 ORTHO05D002568 2.6e-30 136.7 257 36.2
FvH4_1g23521 Fragaria vesca HOM05D002400 ORTHO05D002568 4.5e-30 136.0 253 37.2
RcHm_v2.0_Chr3g0474111 Rosa chinensis HOM05D002400 ORTHO05D002568 4.5e-30 136.0 247 38.5
MD14G1024900 Malus domestica HOM05D002400 ORTHO05D002568 7.6e-30 135.2 212 40.6
FvH4_6g33960 Fragaria vesca HOM05D002400 ORTHO05D002568 1.7e-29 134.0 253 36.0
FAN14G2111 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.9e-29 133.3 205 42.0
RcHm_v2.0_Chr3g0475381 Rosa chinensis HOM05D002400 ORTHO05D002568 2.9e-29 133.3 243 36.6
MD14G1026000 Malus domestica HOM05D002400 ORTHO05D002568 3.8e-29 132.9 245 35.5
FAN09G0521 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.4e-29 131.7 205 36.6
FAN09G1471 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-28 131.3 238 35.7
RcHm_v2.0_Chr3g0473961 Rosa chinensis HOM05D002400 ORTHO05D002568 1.9e-28 130.6 242 38.4
FAN02G2106 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.5e-28 130.2 238 36.1
MD14G1025400 Malus domestica HOM05D002400 ORTHO05D002568 5.5e-28 129.0 243 36.2
MD15G1012200 Malus domestica HOM05D002400 ORTHO05D002568 7.1e-28 128.6 215 41.9
MD14G1025600 Malus domestica HOM05D002400 ORTHO05D002568 9.3e-28 128.3 250 35.6
FAN08G1360 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-27 127.9 253 36.0
FAN18G0208 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.9e-27 125.2 230 37.0
MD12G1202000 Malus domestica HOM05D002400 ORTHO05D002568 7.9e-27 125.2 247 37.2
FAN18G0377 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.0e-26 124.8 245 36.7
MD12G1201900 Malus domestica HOM05D002400 ORTHO05D002568 1.8e-26 124.0 251 35.1
Prupe.1G551800 Prunus persica HOM05D002400 ORTHO05D002568 2.3e-26 123.6 243 37.0
FvH4_5g26390 Fragaria vesca HOM05D002400 ORTHO05D002568 5.1e-26 122.5 220 35.5
FAN08G0492 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.7e-26 122.1 214 39.7
FvH4_6g18950 Fragaria vesca HOM05D002400 ORTHO05D002568 1.1e-25 121.3 206 39.8
FvH4_5g32301 Fragaria vesca HOM05D002400 ORTHO05D002568 1.5e-25 120.9 230 36.5
FvH4_6g19040 Fragaria vesca HOM05D002400 ORTHO05D002568 1.9e-25 120.6 223 34.5
FvH4_6g19370 Fragaria vesca HOM05D002400 ORTHO05D002568 2.5e-25 120.2 197 39.1
FAN14G5775 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.3e-25 119.4 199 39.7
FAN05G1326 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.4e-25 118.6 205 41.0
Prupe.7G106400 Prunus persica HOM05D002400 ORTHO05D002568 1.3e-24 117.9 252 33.7
FvH4_6g19361 Fragaria vesca HOM05D002400 ORTHO05D002568 2.2e-24 117.1 237 35.4
MD12G1026800 Malus domestica HOM05D002400 ORTHO05D002568 2.2e-24 117.1 228 33.3
MD12G1025400 Malus domestica HOM05D002400 ORTHO05D002568 3.7e-24 116.3 243 35.8
FvH4_6g18982 Fragaria vesca HOM05D002400 ORTHO05D002568 4.8e-24 115.9 202 38.1
FAN14G5714 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.3e-24 115.5 237 35.0
RcHm_v2.0_Chr3g0474041 Rosa chinensis HOM05D002400 ORTHO05D002568 8.2e-24 115.2 206 37.4
FAN14G5626 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-23 114.8 219 35.6
FAN04G1411 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.1e-23 113.2 227 35.2
MD14G1025200 Malus domestica HOM05D002400 ORTHO05D002568 3.1e-23 113.2 229 37.1
RcHm_v2.0_Chr3g0458171 Rosa chinensis HOM05D002400 ORTHO05D002568 5.3e-23 112.5 244 34.0
vmacro12123 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 9.0e-23 111.7 214 32.7
RcHm_v2.0_Chr5g0069001 Rosa chinensis HOM05D002400 ORTHO05D002568 2.0e-22 110.5 281 31.3
FvH4_6g33920 Fragaria vesca HOM05D002400 ORTHO05D002568 5.9e-22 109.0 161 39.8
FAN13G3133 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.9e-22 109.0 198 37.4
FAN14G4031 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.9e-22 109.0 201 36.3
RcHm_v2.0_Chr5g0068981 Rosa chinensis HOM05D002400 ORTHO05D002568 5.9e-22 109.0 285 30.5
MD04G1145500 Malus domestica HOM05D002400 ORTHO05D002568 1.7e-21 107.5 254 34.3
RcHm_v2.0_Chr1g0330111 Rosa chinensis HOM05D002400 ORTHO05D002568 1.1e-20 104.8 198 36.9
vmacro05682 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 1.4e-20 104.4 213 32.4
FvH4_6g18911 Fragaria vesca HOM05D002400 ORTHO05D002568 2.5e-20 103.6 264 31.4
FvH4_6g08300 Fragaria vesca HOM05D002400 ORTHO05D002568 3.2e-20 103.2 242 33.1
FAN02G3141 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.2e-20 103.2 223 33.6
FAN14G3017 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.2e-20 103.2 242 33.1
RcHm_v2.0_Chr3g0474021 Rosa chinensis HOM05D002400 ORTHO05D002568 7.2e-20 102.1 135 43.7
MD12G1217800 Malus domestica HOM05D002400 ORTHO05D002568 1.6e-19 100.9 248 33.1
FAN05G1596 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.6e-19 99.4 223 32.7
FAN05G2917 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.6e-19 99.4 264 31.1
FAN09G1480 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.1e-19 99.0 213 31.9
Prupe.7G105000 Prunus persica HOM05D002400 ORTHO05D002568 7.9e-19 98.6 135 43.7
FvH4_6g19051 Fragaria vesca HOM05D002400 ORTHO05D002568 2.3e-18 97.1 207 31.9
RcHm_v2.0_Chr3g0474191 Rosa chinensis HOM05D002400 ORTHO05D002568 3.0e-18 96.7 153 40.5
FvH4_7g04740 Fragaria vesca HOM05D002400 ORTHO05D002568 2.5e-17 93.6 220 34.1
FAN03G0307 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.5e-17 93.6 220 33.6
FvH4_5g31730 Fragaria vesca HOM05D002400 ORTHO05D002568 3.3e-17 93.2 200 35.5
FAN06G1414 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.3e-17 93.2 220 34.1
FAN18G0566 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.3e-17 92.8 148 39.9
MD12G1026500 Malus domestica HOM05D002400 ORTHO05D002568 4.3e-17 92.8 122 41.8
Prupe.7G105900 Prunus persica HOM05D002400 ORTHO05D002568 5.7e-17 92.4 126 42.1
Prupe.7G105500 Prunus persica HOM05D002400 ORTHO05D002568 7.4e-17 92.0 126 40.5
RcHm_v2.0_Chr7g0217271 Rosa chinensis HOM05D002400 ORTHO05D002568 1.7e-16 90.9 133 39.1
FAN08G3157 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.8e-16 90.1 126 42.1
FAN09G4576 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.3e-16 89.0 155 36.8
MD12G1217700 Malus domestica HOM05D002400 ORTHO05D002568 6.3e-16 89.0 222 33.8
Prupe.6G269600 Prunus persica HOM05D002400 ORTHO05D002568 6.3e-16 89.0 201 34.8
RcHm_v2.0_Chr3g0474141 Rosa chinensis HOM05D002400 ORTHO05D002568 6.3e-16 89.0 295 26.4
FvH4_6g18954 Fragaria vesca HOM05D002400 ORTHO05D002568 8.2e-16 88.6 122 42.6
FAN04G1392 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-15 88.2 219 32.4
Prupe.7G106200 Prunus persica HOM05D002400 ORTHO05D002568 1.8e-15 87.4 112 45.5
Prupe.6G311500 Prunus persica HOM05D002400 ORTHO05D002568 3.1e-15 86.7 202 32.2
FAN18G0337 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.1e-15 86.3 218 31.7
FvH4_5g29160 Fragaria vesca HOM05D002400 ORTHO05D002568 9.1e-15 85.1 218 31.2
FAN06G4070 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-14 84.7 220 33.2
FvH4_6g19053 Fragaria vesca HOM05D002400 ORTHO05D002568 3.4e-14 83.2 88 53.4
FAN04G0043 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.5e-14 82.8 124 41.9
FvH4_5g20611 Fragaria vesca HOM05D002400 ORTHO05D002568 5.9e-14 82.4 153 37.9
FvH4_6g18952 Fragaria vesca HOM05D002400 ORTHO05D002568 1.7e-13 80.9 144 33.3
vmacro05683 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 3.8e-13 79.7 247 29.6
Manes.09G032300 Manihot esculenta HOM05D002400 ORTHO05D002568 6.5e-13 79.0 242 30.2
vmacro12117 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 8.5e-13 78.6 284 28.2
FAN26G2620 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.9e-12 77.4 196 31.6
MD14G1026200 Malus domestica HOM05D002400 ORTHO05D002568 4.2e-12 76.3 80 48.8
Prupe.5G196300 Prunus persica HOM05D002400 ORTHO05D002568 7.2e-12 75.5 101 39.6
MD04G1145900 Malus domestica HOM05D002400 ORTHO05D002568 9.4e-12 75.1 123 35.0
FAN06G5021 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-11 74.7 120 36.7
FAN05G2806 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.6e-11 74.3 102 42.2
RcHm_v2.0_Chr3g0474161 Rosa chinensis HOM05D002400 ORTHO05D002568 2.1e-11 73.9 77 44.2
FAN14G5794 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.7e-11 72.8 242 28.9
QL02p059625 Quercus lobata HOM05D002400 ORTHO05D002568 6.1e-11 72.4 243 28.0
FAN02G0807 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.0e-10 71.6 147 33.3
FAN04G0973 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.4e-10 71.2 126 38.1
FAN19G0352 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.4e-10 71.2 251 27.5
Haze_21106 Corylus avellana HOM05D002400 ORTHO05D002568 2.3e-10 70.5 226 27.9
FAN18G0503 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.9e-10 69.7 78 42.3
FAN19G0785 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.1e-10 69.3 125 37.6
Cfa005421 Carpinus fangiana HOM05D002400 ORTHO05D002568 6.7e-10 68.9 230 26.5
MD04G1145400 Malus domestica HOM05D002400 ORTHO05D002568 6.7e-10 68.9 102 42.2
Cfa005419 Carpinus fangiana HOM05D002400 ORTHO05D002568 8.8e-10 68.6 230 25.2
FAN08G3505 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.5e-09 67.8 114 36.8
Prupe.7G104800 Prunus persica HOM05D002400 ORTHO05D002568 2.6e-09 67.0 81 44.4
Duzib132G1153 Durio zibethinus HOM05D002400 ORTHO05D002568 3.3e-09 66.6 149 29.5
Dinv05457 Davidia involucrata HOM05D002400 ORTHO05D002568 7.4e-09 65.5 197 28.9
Dinv02731 Davidia involucrata HOM05D002400 ORTHO05D002568 1.7e-08 64.3 225 25.3
RcHm_v2.0_Chr3g0474131 Rosa chinensis HOM05D002400 ORTHO05D002568 2.2e-08 63.9 77 41.6
FvH4_6g19090 Fragaria vesca HOM05D002400 ORTHO05D002568 2.8e-08 63.5 71 47.9
MD05G1234100 Malus domestica HOM05D002400 ORTHO05D002568 2.8e-08 63.5 87 42.5
FvH4_6g18961 Fragaria vesca HOM05D002400 ORTHO05D002568 4.8e-08 62.8 183 28.4
Cfa017093 Carpinus fangiana HOM05D002400 ORTHO05D002568 1.1e-07 61.6 217 26.7
FAN04G3210 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.1e-07 60.1 78 42.3
MD02G1269000 Malus domestica HOM05D002400 ORTHO05D002568 3.1e-07 60.1 60 48.3
FvH4_7g09171 Fragaria vesca HOM05D000003 ORTHO05D002568 4.1e-07 59.7 80 41.2
FAN15G2585 Fragaria x ananassa HOM05D045789 ORTHO05D002568 4.1e-07 59.7 69 46.4
FAN15G2963 Fragaria x ananassa HOM05D045789 ORTHO05D002568 4.1e-07 59.7 69 46.4
Prupe.7G104900 Prunus persica HOM05D002400 ORTHO05D002568 4.1e-07 59.7 106 34.9
RcHm_v2.0_Chr3g0474181 Rosa chinensis HOM05D002400 ORTHO05D002568 9.1e-07 58.5 68 45.6
TWI81G0137 Tripterygium wilfordii HOM05D002400 ORTHO05D002568 2.0e-06 57.4 239 24.7
FAN10G1459 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.4e-06 56.6 51 49.0
RcHm_v2.0_Chr7g0217281 Rosa chinensis HOM05D002400 ORTHO05D002568 5.9e-06 55.8 96 40.6
CiPaw.12G069200 Carya illinoinensis HOM05D002400 ORTHO05D002568 7.7e-06 55.5 201 25.4
FAN04G2586 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.7e-06 55.5 84 35.7
Prupe.7G108700 Prunus persica HOM05D002400 ORTHO05D002568 7.7e-06 55.5 103 36.9


User provided reference genes

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