Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G2650 Fragaria x ananassa HOM05D001638 ORTHO05D005197 8.9e-38 159.8 84 100.0
FAN06G4261 Fragaria x ananassa HOM05D001638 ORTHO05D005197 6.4e-36 153.7 87 95.4
FvH4_7g09370 Fragaria vesca HOM05D001638 ORTHO05D005197 4.6e-34 147.5 87 94.3
FAN01G1872 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.8e-22 109.0 95 72.6
FAN10G1788 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.8e-22 109.0 95 72.6
FAN10G2339 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.8e-22 109.0 95 72.6
FvH4_7g09810 Fragaria vesca HOM05D001638 ORTHO05D005197 5.2e-22 107.5 95 71.6
RcHm_v2.0_Chr1g0346971 Rosa chinensis HOM05D001638 ORTHO05D005197 7.5e-21 103.6 95 69.5
FAN06G3795 Fragaria x ananassa HOM05D001638 ORTHO05D005197 4.9e-20 100.9 105 62.9
Prupe.2G127200 Prunus persica HOM05D001638 ORTHO05D005197 2.5e-16 88.6 99 56.6
Cfa011091 Carpinus fangiana HOM05D001638 ORTHO05D005197 3.3e-16 88.2 87 62.1
MD02G1217000 Malus domestica HOM05D001638 ORTHO05D005197 4.3e-16 87.8 95 58.9
CANSAT56G0649 Cannabis sativa HOM05D001638 ORTHO05D005197 7.3e-16 87.0 89 60.7
LjContig00564g0006049 Lotus japonicus HOM05D001638 ORTHO05D005197 2.8e-15 85.1 91 56.0
Glyma.09G089400 Glycine max HOM05D001638 ORTHO05D005197 6.2e-15 84.0 91 53.8
arahy.Tifrunner.gnm1.ann1.9JI82G Arachis hypogaea HOM05D001638 ORTHO05D005197 1.1e-14 83.2 89 57.3
Medtr5g064850 Medicago truncatula HOM05D001638 ORTHO05D005197 1.4e-14 82.8 91 54.9
Actinidia12156 Actinidia chinensis HOM05D001638 ORTHO05D005197 1.8e-14 82.4 93 52.7
DCAR_023354 Daucus carota HOM05D001638 ORTHO05D005197 1.8e-14 82.4 87 58.6
Gohir.D13G032100 Gossypium hirsutum HOM05D001638 ORTHO05D005197 1.8e-14 82.4 89 56.2
Gorai.013G036600 Gossypium raimondii HOM05D001638 ORTHO05D005197 1.8e-14 82.4 89 56.2
arahy.Tifrunner.gnm1.ann1.MQ0E05 Arachis hypogaea HOM05D001638 ORTHO05D005197 2.4e-14 82.0 89 56.2
Thecc.02G084000 Theobroma cacao HOM05D001638 ORTHO05D005197 2.4e-14 82.0 89 55.1
Gohir.A13G033800 Gossypium hirsutum HOM05D001638 ORTHO05D005197 3.1e-14 81.6 89 56.2
Medtr7g007890 Medicago truncatula HOM05D001638 ORTHO05D005197 3.1e-14 81.6 91 53.8
DCAR_029773 Daucus carota HOM05D001638 ORTHO05D005197 5.2e-14 80.9 87 57.5
Dinv44076 Davidia involucrata HOM05D001638 ORTHO05D005197 5.2e-14 80.9 88 55.7
Ciclev10015475m.g Citrus clementina HOM05D001638 ORTHO05D005197 6.8e-14 80.5 89 57.3
MELO3C005976.2 Cucumis melo HOM05D001638 ORTHO05D005197 6.8e-14 80.5 89 57.3
Ca_04112_v3 Cicer arietinum L. HOM05D001638 ORTHO05D005197 8.9e-14 80.1 91 52.7
Lalb_Chr19g0127051 Lupinus albus HOM05D001638 ORTHO05D005197 8.9e-14 80.1 90 52.2
Manes.01G272000 Manihot esculenta HOM05D001638 ORTHO05D005197 8.9e-14 80.1 89 53.9
GSVIVG01018246001 Vitis vinifera HOM05D001638 ORTHO05D005197 8.9e-14 80.1 89 55.1
Duzib132G0757 Durio zibethinus HOM05D001638 ORTHO05D005197 1.2e-13 79.7 89 56.2
Psat0s3614g0040 Pisum sativum HOM05D001638 ORTHO05D005197 1.2e-13 79.7 91 57.1
QL01p011221 Quercus lobata HOM05D001638 ORTHO05D005197 1.5e-13 79.3 92 55.4
Sed0004454 Sechium edule HOM05D001638 ORTHO05D005197 1.5e-13 79.3 89 59.6
TAR629G0136 Trochodendron aralioides HOM05D001638 ORTHO05D005197 1.5e-13 79.3 100 51.0
TAR636G3630 Trochodendron aralioides HOM05D001638 ORTHO05D005197 2.0e-13 79.0 88 55.7
CiPaw.14G021800 Carya illinoinensis HOM05D001638 ORTHO05D005197 2.6e-13 78.6 89 53.9
QL04p031108 Quercus lobata HOM05D001638 ORTHO05D005197 3.4e-13 78.2 92 54.3
VMungo1383G3402 Vigna mungo HOM05D001638 ORTHO05D005197 3.4e-13 78.2 94 52.1
Peaxi162Scf00392g00227 Petunia axillaris HOM05D001638 ORTHO05D005197 5.8e-13 77.4 87 54.0
COL.COLO4_25944 Corchorus olitorius HOM05D001638 ORTHO05D005197 7.6e-13 77.0 89 52.8
ECA234G3220 Erigeron canadensis HOM05D001638 ORTHO05D005197 9.9e-13 76.6 88 54.5
ClCG05G000380 Citrullus lanatus HOM05D001638 ORTHO05D005197 1.3e-12 76.3 85 58.8
CsaV3_3G007540 Cucumis sativus L. HOM05D001638 ORTHO05D005197 1.3e-12 76.3 89 53.9
Dinv43635 Davidia involucrata HOM05D001638 ORTHO05D005197 1.7e-12 75.9 89 51.7
TWI23G0567 Tripterygium wilfordii HOM05D001638 ORTHO05D005197 1.7e-12 75.9 90 50.0
Nitab4.5_0000914g0150 Nicotiana tabacum HOM05D001638 ORTHO05D005197 2.2e-12 75.5 89 55.1
Nitab4.5_0010229g0010 Nicotiana tabacum HOM05D001638 ORTHO05D005197 2.2e-12 75.5 89 55.1
vmacro16776 Vaccinium macrocarpon HOM05D001638 ORTHO05D005197 2.2e-12 75.5 89 49.4
SGA_v2.0_scaffold5G02962 Striga asiatica HOM05D001638 ORTHO05D005197 2.9e-12 75.1 89 53.9
Rhsim07G0034600 Rhododendron simsii HOM05D001638 ORTHO05D005197 3.8e-12 74.7 89 50.6
CAN.G362.16 Capsicum annuum HOM05D001638 ORTHO05D005197 4.9e-12 74.3 87 52.9
Potri.019G085100 Populus trichocarpa HOM05D001638 ORTHO05D005197 4.9e-12 74.3 89 51.7
Sabra19G0096200 Salix brachista HOM05D001638 ORTHO05D005197 4.9e-12 74.3 89 51.7
Solyc01g090470.3 Solanum lycopersicum HOM05D001638 ORTHO05D005197 4.9e-12 74.3 87 52.9
Sopen01g036260 Solanum pennellii HOM05D001638 ORTHO05D005197 4.9e-12 74.3 87 52.9
MSTRG.12501 Avicennia marina HOM05D001638 ORTHO05D005197 6.4e-12 73.9 89 53.9
Eucgr.F04452 Eucalyptus grandis HOM05D001638 ORTHO05D005197 6.4e-12 73.9 89 51.7
MD02G1263900 Malus domestica HOM05D001638 ORTHO05D005197 6.4e-12 73.9 78 57.7
Glyma.18G253900 Glycine max HOM05D001638 ORTHO05D005197 8.4e-12 73.6 91 51.6
THA.LOC104818326 Tarenaya hassleriana HOM05D001638 ORTHO05D005197 8.4e-12 73.6 90 52.2
Actinidia40391 Actinidia chinensis HOM05D001638 ORTHO05D005197 1.1e-11 73.2 89 50.6
Aa31LG11G2080 Aethionema arabicum HOM05D001638 ORTHO05D005197 1.1e-11 73.2 89 49.4
PGSC0003DMG400026041 Solanum tuberosum HOM05D001638 ORTHO05D005197 1.1e-11 73.2 87 51.7
HanXRQChr14g0428901 Helianthus annuus HOM05D001638 ORTHO05D005197 1.4e-11 72.8 86 53.5
Lsat_1_v5_gn_4_70960 Lactuca sativa HOM05D001638 ORTHO05D005197 1.4e-11 72.8 91 50.5
Phvul.008G045000 Phaseolus vulgaris HOM05D001638 ORTHO05D005197 1.4e-11 72.8 91 50.5
BcaC04g23457 Brassica carinata HOM05D001638 ORTHO05D005197 1.9e-11 72.4 89 49.4
BcaC06g33229 Brassica carinata HOM05D001638 ORTHO05D005197 1.9e-11 72.4 89 49.4
A09p07280 Brassica napus HOM05D001638 ORTHO05D005197 1.9e-11 72.4 89 49.4
C07p44980 Brassica napus HOM05D001638 ORTHO05D005197 1.9e-11 72.4 89 49.4
BolC7t45021H Brassica oleracea HOM05D001638 ORTHO05D005197 1.9e-11 72.4 89 49.4
BraA09t36377Z Brassica rapa HOM05D001638 ORTHO05D005197 1.9e-11 72.4 89 49.4
Lsat_1_v5_gn_4_15080 Lactuca sativa HOM05D001638 ORTHO05D005197 1.9e-11 72.4 86 53.5
Sp2g24540 Schrenkiella parvula HOM05D001638 ORTHO05D005197 1.9e-11 72.4 89 49.4
A03p46940 Brassica napus HOM05D001638 ORTHO05D005197 2.4e-11 72.0 92 47.8
C09p08140 Brassica napus HOM05D001638 ORTHO05D005197 2.4e-11 72.0 89 49.4
BolC9t53726H Brassica oleracea HOM05D001638 ORTHO05D005197 2.4e-11 72.0 89 49.4
BraA03t13813Z Brassica rapa HOM05D001638 ORTHO05D005197 2.4e-11 72.0 92 47.8
Cc02_g24880 Coffea canephora HOM05D001638 ORTHO05D005197 2.4e-11 72.0 89 52.8
Thhalv10004255m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 2.4e-11 72.0 89 48.3
Hund17077 Selenicereus undatus HOM05D001638 ORTHO05D005197 3.2e-11 71.6 88 48.9
Sc02g0002980 Simmondsia chinensis HOM05D001638 ORTHO05D005197 3.2e-11 71.6 89 49.4
AL1G10102 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 4.1e-11 71.2 83 50.6
AT5G61330 Arabidopsis thaliana HOM05D001638 ORTHO05D005197 5.4e-11 70.9 89 48.3
MBI04_g36329_MAGBIO Magnolia biondii HOM05D001638 ORTHO05D005197 5.4e-11 70.9 90 51.1
Carub.0008s2200 Capsella rubella HOM05D001638 ORTHO05D005197 7.1e-11 70.5 89 47.2
Nn6g33853 Nelumbo nucifera HOM05D001638 ORTHO05D005197 7.1e-11 70.5 87 50.6
ATR0057G068 Amborella trichopoda HOM05D001638 ORTHO05D005197 9.2e-11 70.1 90 47.8
CARHR275090 Cardamine hirsuta HOM05D001638 ORTHO05D005197 9.2e-11 70.1 89 48.3
AL8G37990 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 1.2e-10 69.7 89 49.4
unitig_37.g13004 Utricularia gibba HOM05D000186 ORTHO05D001124 1.2e-10 69.7 92 50.0
Migut.N01781 Erythranthe guttata HOM05D001638 ORTHO05D005197 1.6e-10 69.3 91 50.5
EL10Ac1g00784 Beta vulgaris HOM05D001638 ORTHO05D005197 2.1e-10 68.9 88 48.9
Os01g0526200 Oryza sativa ssp. japonica HOM05D001638 ORTHO05D005197 2.1e-10 68.9 75 49.3
Zm00001eb333990 Zea mays HOM05D001638 ORTHO05D005197 2.7e-10 68.6 75 49.3
TPR.G11809 Trifolium pratense HOM05D001638 ORTHO05D005197 3.5e-10 68.2 117 42.7
HanXRQChr01g0007441 Helianthus annuus HOM05D001638 ORTHO05D005197 4.6e-10 67.8 88 50.0
Lj9C558G6 Lonicera japonica HOM05D001638 ORTHO05D001875 4.6e-10 67.8 113 45.1
PSO017G3357 Papaver somniferum HOM05D001638 ORTHO05D005197 4.6e-10 67.8 73 53.4
Zm00001eb127190 Zea mays HOM05D001638 ORTHO05D005197 4.6e-10 67.8 75 49.3
CSS0022011 Camellia sinensis var. sinensis HOM05D001638 ORTHO05D005197 6.0e-10 67.4 89 49.4
CDE03G0227 Ceratophyllum demersum HOM05D001638 ORTHO05D005197 1.0e-09 66.6 89 46.1
PSO541G3735 Papaver somniferum HOM05D001638 ORTHO05D005197 1.3e-09 66.2 73 52.1
PSO170G6800 Papaver somniferum HOM05D001638 ORTHO05D005197 1.7e-09 65.9 73 52.1
Ah.03g133920 Amaranthus hybridus HOM05D001638 ORTHO05D005197 2.3e-09 65.5 88 47.7
PGR031G2794 Punica granatum HOM05D001638 ORTHO05D005197 2.3e-09 65.5 87 48.3
BcaB04g19906 Brassica carinata HOM05D001638 ORTHO05D005197 3.0e-09 65.1 95 46.3
AUR62023428 Chenopodium quinoa HOM05D001638 ORTHO05D005197 3.0e-09 65.1 93 50.5
SHI03505 Sapria himalayana HOM05D001638 ORTHO05D005197 3.0e-09 65.1 72 52.8
Aqoxy7G00848 Aquilegia oxysepala HOM05D001638 ORTHO05D005197 5.1e-09 64.3 75 49.3
Thhalv10020921m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 5.1e-09 64.3 89 47.2
SalBow6G5432 Salvia bowleyana HOM05D001638 ORTHO05D005197 1.5e-08 62.8 107 41.1
FAN06G4046 Fragaria x ananassa HOM05D001638 ORTHO05D005197 2.5e-08 62.0 74 54.1
MD07G1073400 Malus domestica HOM05D001638 ORTHO05D005197 2.1e-07 58.9 55 60.0
SEGI_12976 Sequoiadendron giganteum HOM05D001638 ORTHO05D005197 4.7e-07 57.8 99 40.4
Cpa.g.sc116.74 Carica papaya HOM05D001638 ORTHO05D005197 1.4e-06 56.2 52 57.7
Atru.chr5.165 Acer truncatum HOM05D001638 ORTHO05D005197 9.0e-06 53.5 68 52.9


User provided reference genes

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