Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 7.7e-285 983.0 461 100.0
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.1e-283 979.2 461 99.8
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 7.2e-283 976.5 461 99.8
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 6.3e-279 963.4 461 97.4
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 1.5e-264 915.6 462 92.9
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 3.4e-264 914.4 462 93.3
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 3.9e-260 901.0 461 88.9
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 3.9e-260 901.0 461 91.5
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 3.3e-259 897.9 461 90.9
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 8.1e-258 893.3 461 90.0
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 1.5e-256 889.0 461 88.3
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 4.4e-256 887.5 461 88.3
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 4.4e-256 887.5 461 90.5
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 4.9e-255 884.0 461 90.0
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 1.1e-254 882.9 461 89.2
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.4e-254 882.5 461 89.6
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 1.4e-254 882.5 476 85.9
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 1.9e-254 882.1 461 88.7
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 4.1e-254 880.9 461 88.7
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 4.1e-254 880.9 461 88.7
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 5.4e-254 880.6 461 88.5
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 5.4e-254 880.6 461 89.4
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 7.1e-254 880.2 461 88.9
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.2e-253 879.4 460 87.2
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.2e-253 879.4 460 87.2
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 4.6e-253 877.5 461 88.5
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 1.0e-252 876.3 461 88.7
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 3.0e-252 874.8 461 88.3
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 5.1e-252 874.0 461 88.3
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 1.9e-251 872.1 461 87.6
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 2.5e-251 871.7 461 86.3
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 5.6e-251 870.5 461 85.7
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 2.1e-250 868.6 461 86.6
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 6.2e-250 867.1 461 86.6
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 8.1e-250 866.7 461 85.7
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 1.4e-249 865.9 461 86.1
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 3.1e-249 864.8 461 87.6
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 5.8e-248 860.5 461 85.5
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 5.8e-248 860.5 461 85.5
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 9.9e-248 859.8 482 84.0
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 1.1e-246 856.3 461 87.2
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 4.6e-245 850.9 461 84.8
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.3e-244 849.4 461 86.6
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 2.3e-244 848.6 461 84.4
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 8.6e-244 846.7 461 83.7
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 1.9e-243 845.5 461 84.4
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 1.9e-243 845.5 461 84.4
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 5.6e-243 844.0 461 83.1
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 5.6e-243 844.0 461 85.0
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 7.3e-243 843.6 461 84.4
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 7.3e-243 843.6 462 84.0
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 1.2e-242 842.8 461 86.8
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 3.6e-242 841.3 462 84.0
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 1.1e-241 839.7 458 83.2
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 4.0e-241 837.8 461 82.9
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 9.9e-240 833.2 461 83.3
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 4.9e-239 830.9 461 82.4
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 8.4e-239 830.1 461 85.2
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 3.2e-238 828.2 460 83.0
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 3.2e-238 828.2 461 82.4
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 5.4e-238 827.4 461 82.6
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 9.3e-238 826.6 461 82.6
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 9.3e-238 826.6 461 82.9
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 8.7e-236 820.1 461 82.0
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 3.3e-235 818.1 461 81.8
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 9.6e-235 816.6 461 81.8
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 6.2e-234 813.9 455 81.8
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 5.3e-233 810.8 461 80.0
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 4.9e-231 804.3 443 82.2
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 6.4e-231 803.9 488 77.3
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 2.4e-230 802.0 461 79.8
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 3.2e-230 801.6 459 79.5
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 7.1e-230 800.4 461 80.3
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 1.6e-229 799.3 461 80.5
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 2.7e-229 798.5 461 82.6
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 4.6e-229 797.7 461 81.1
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 2.8e-226 788.5 461 79.4
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 2.8e-226 788.5 499 75.4
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 8.4e-223 776.9 461 79.6
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.1e-219 766.5 461 77.4
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 9.6e-219 763.5 465 74.6
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 4.8e-218 761.1 464 75.2
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.6e-205 719.5 338 100.0
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 1.0e-204 716.8 458 74.7
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 1.3e-204 716.5 499 68.5
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 8.2e-202 707.2 461 72.7
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.1e-201 706.8 338 98.8
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 3.1e-193 678.7 393 79.1
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 1.7e-191 672.9 458 66.2
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 2.5e-190 669.1 341 91.5
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.6e-189 665.2 451 66.7
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.7e-186 655.2 451 66.1
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.4e-185 652.5 339 90.0
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.1e-185 650.6 339 90.0
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.1e-182 643.7 342 88.3
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.1e-182 643.7 342 88.3
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.1e-179 633.6 456 63.4
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 1.6e-176 623.2 323 88.9
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 7.7e-176 620.9 338 85.5
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.6e-173 613.2 337 84.0
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 4.7e-173 611.7 457 61.1
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.8e-170 602.4 311 90.0
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 8.5e-167 590.9 337 81.3
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 2.7e-160 569.3 449 56.8
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.3e-150 535.4 292 87.0
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 7.3e-150 534.6 295 84.4
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 4.7e-149 531.9 291 83.8
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 6.2e-149 531.6 337 75.1
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 9.8e-147 524.2 309 80.3
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 3.3e-142 509.2 277 83.4
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 3.0e-135 486.1 339 64.3
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 1.1e-129 467.6 280 77.9
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 3.8e-106 389.4 450 41.1
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 4.6e-96 355.9 484 37.2
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 7.7e-75 285.4 161 78.3
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.0e-58 231.9 110 96.4
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.0e-58 231.9 110 96.4
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.2e-58 230.7 110 95.5
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 1.7e-53 214.5 185 58.4
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 9.5e-41 172.2 99 82.8
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 1.9e-12 78.2 40 85.0


User provided reference genes

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