Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G0882 Fragaria x ananassa HOM05D000279 ORTHO05D000498 3.3e-77 291.6 142 100.0
FAN06G2489 Fragaria x ananassa HOM05D000279 ORTHO05D000498 3.3e-77 291.6 142 100.0
FvH4_7g04770 Fragaria vesca HOM05D000279 ORTHO05D000498 4.2e-32 141.7 94 73.4
FAN10G0926 Fragaria x ananassa HOM05D000279 ORTHO05D000498 9.4e-32 140.6 94 73.4
FAN06G0100 Fragaria x ananassa HOM05D000279 ORTHO05D000498 1.2e-31 140.2 94 72.3
FAN06G1761 Fragaria x ananassa HOM05D000279 ORTHO05D000498 1.2e-31 140.2 94 72.3
FAN01G1834 Fragaria x ananassa HOM05D000279 ORTHO05D000498 4.7e-31 138.3 94 73.4
RcHm_v2.0_Chr1g0330201 Rosa chinensis HOM05D000279 ORTHO05D000498 3.0e-30 135.6 94 72.3
FAN23G2153 Fragaria x ananassa HOM05D000279 ORTHO05D000498 1.2e-29 133.7 94 71.3
Prupe.2G052700 Prunus persica HOM05D000279 ORTHO05D000498 9.4e-24 114.0 92 56.5
Prupe.2G052900 Prunus persica HOM05D000279 ORTHO05D000498 2.7e-23 112.5 93 55.9
Prupe.2G052800 Prunus persica HOM05D000279 ORTHO05D000498 1.0e-22 110.5 93 53.8
MD07G1051500 Malus domestica HOM05D000279 ORTHO05D000498 1.4e-22 110.2 93 57.0
FAN06G3882 Fragaria x ananassa HOM05D000279 ORTHO05D000498 1.8e-19 99.8 103 55.3
FAN26G2991 Fragaria x ananassa HOM05D000279 ORTHO05D000498 7.7e-18 94.4 94 55.3
Lalb_Chr02g0154011 Lupinus albus HOM05D000279 ORTHO05D000498 2.3e-17 92.8 147 35.4
Lalb_Chr02g0154001 Lupinus albus HOM05D000279 ORTHO05D000498 4.2e-16 88.6 122 43.4
Prupe.2G051200 Prunus persica HOM05D000279 ORTHO05D000498 1.6e-15 86.7 142 40.1
Lj5g0003132 Lotus japonicus HOM05D000279 ORTHO05D000498 6.1e-15 84.7 95 44.2
Lj5g0022331 Lotus japonicus HOM05D000279 ORTHO05D000498 8.0e-15 84.3 122 39.3
MD02G1267700 Malus domestica HOM05D000279 ORTHO05D000498 1.0e-14 84.0 160 35.0
Glyma.08G329800 Glycine max HOM05D000279 ORTHO05D000498 1.4e-14 83.6 141 37.6
Lj5g0012225 Lotus japonicus HOM05D000279 ORTHO05D000498 1.4e-14 83.6 95 43.2
Lj6g0007434 Lotus japonicus HOM05D000279 ORTHO05D000498 5.2e-14 81.6 105 42.9
Psat0s1122g0160 Pisum sativum HOM05D000279 ORTHO05D000498 6.8e-14 81.3 95 47.4
Psat3g026480 Pisum sativum HOM05D000279 ORTHO05D000498 6.8e-14 81.3 129 38.8
Lj1g0010305 Lotus japonicus HOM05D006729 ORTHO05D008502 8.9e-14 80.9 112 42.9
MD11G1209800 Malus domestica HOM05D000279 ORTHO05D000498 8.9e-14 80.9 139 36.0
Prupe.2G052600 Prunus persica HOM05D000279 ORTHO05D000498 8.9e-14 80.9 184 31.0
arahy.Tifrunner.gnm1.ann1.TBP304 Arachis hypogaea HOM05D000279 ORTHO05D000498 2.0e-13 79.7 122 36.1
Glyma.18G076700 Glycine max HOM05D000279 ORTHO05D000498 3.4e-13 79.0 122 39.3
MD07G1051300 Malus domestica HOM05D000279 ORTHO05D000498 5.7e-13 78.2 61 60.7
MD02G1268100 Malus domestica HOM05D000279 ORTHO05D000498 9.8e-13 77.4 62 61.3
arahy.Tifrunner.gnm1.ann1.EVN2AK Arachis hypogaea HOM05D000279 ORTHO05D000498 1.3e-12 77.0 122 35.2
FAN10G1442 Fragaria x ananassa HOM05D000279 ORTHO05D000498 1.7e-12 76.6 44 86.4
MD02G1268500 Malus domestica HOM05D000279 ORTHO05D000498 1.7e-12 76.6 61 62.3
MD03G1193600 Malus domestica HOM05D000279 ORTHO05D000498 1.7e-12 76.6 166 33.1
Phvul.007G264600 Phaseolus vulgaris HOM05D000279 ORTHO05D000498 1.7e-12 76.6 117 35.9
MD02G1268400 Malus domestica HOM05D000279 ORTHO05D000498 3.7e-12 75.5 61 60.7
Lj6g0016290 Lotus japonicus HOM05D000279 ORTHO05D000498 4.9e-12 75.1 113 38.9
Psat0s1122g0200 Pisum sativum HOM05D000279 ORTHO05D000498 4.9e-12 75.1 106 40.6
Ca_09092_v3 Cicer arietinum L. HOM05D000279 ORTHO05D000498 1.8e-11 73.2 52 71.2
Lj5g0005924 Lotus japonicus HOM05D000279 ORTHO05D000498 3.1e-11 72.4 121 38.8
MD07G1051700 Malus domestica HOM05D000279 ORTHO05D000498 3.1e-11 72.4 55 61.8
MD02G1267400 Malus domestica HOM05D000279 ORTHO05D000498 4.1e-11 72.0 54 63.0
TPR.G32309 Trifolium pratense HOM05D000279 ORTHO05D000498 4.1e-11 72.0 85 47.1
Ca_09094_v3 Cicer arietinum L. HOM05D000279 ORTHO05D000498 7.0e-11 71.2 147 28.6
Medtr7g107200 Medicago truncatula HOM05D000279 ORTHO05D000498 9.2e-11 70.9 155 32.9
RcHm_v2.0_Chr1g0330031 Rosa chinensis HOM05D000279 ORTHO05D000498 9.2e-11 70.9 58 53.4
FAN10G4310 Fragaria x ananassa HOM05D000083 ORTHO05D012652 1.2e-10 70.5 55 61.8
FAN16G3062 Fragaria x ananassa HOM05D003038 ORTHO05D003514 1.2e-10 70.5 131 32.1
Glyma.10G088100 Glycine max HOM05D000279 ORTHO05D000498 2.0e-10 69.7 117 33.3
RcHm_v2.0_Chr1g0330011 Rosa chinensis HOM05D000279 ORTHO05D000498 2.0e-10 69.7 76 46.1
VMungo0499G0001 Vigna mungo HOM05D000279 ORTHO05D000498 2.0e-10 69.7 99 36.4
FAN21G4058 Fragaria x ananassa HOM05D003038 ORTHO05D003514 2.7e-10 69.3 131 32.8
FAN25G2843 Fragaria x ananassa HOM05D000279 ORTHO05D000498 2.7e-10 69.3 131 32.8
Prupe.2G054900 Prunus persica HOM05D000279 ORTHO05D000498 2.7e-10 69.3 58 56.9
FvH4_3g23520 Fragaria vesca HOM05D000279 ORTHO05D000498 3.5e-10 68.9 131 32.8
Prupe.2G052500 Prunus persica HOM05D000279 ORTHO05D000498 3.5e-10 68.9 61 59.0
Lj3g0027057 Lotus japonicus HOM05D000279 ORTHO05D000498 4.5e-10 68.6 82 43.9
Lj6g0009337 Lotus japonicus HOM05D000279 ORTHO05D000498 4.5e-10 68.6 109 37.6
FAN11G0286 Fragaria x ananassa HOM05D003038 ORTHO05D003514 5.9e-10 68.2 131 32.8
FvH4_7g04750 Fragaria vesca HOM05D000279 ORTHO05D000498 1.0e-09 67.4 53 60.4
FAN06G2560 Fragaria x ananassa HOM05D000279 ORTHO05D000498 1.0e-09 67.4 53 60.4
RcHm_v2.0_Chr5g0041491 Rosa chinensis HOM05D000279 ORTHO05D000498 1.3e-09 67.0 163 28.8
TPR.G438 Trifolium pratense HOM05D000279 ORTHO05D000498 1.7e-09 66.6 50 66.0
FAN01G2354 Fragaria x ananassa HOM05D000279 ORTHO05D000498 2.3e-09 66.2 52 61.5
FAN10G2440 Fragaria x ananassa HOM05D000279 ORTHO05D000498 2.3e-09 66.2 52 61.5
RcHm_v2.0_Chr7g0228171 Rosa chinensis HOM05D000279 ORTHO05D000498 2.3e-09 66.2 48 64.6
FvH4_5g32130 Fragaria vesca HOM05D000279 ORTHO05D000498 2.9e-09 65.9 54 55.6
FAN18G0246 Fragaria x ananassa HOM05D000279 ORTHO05D000498 2.9e-09 65.9 54 55.6
RcHm_v2.0_Chr1g0330141 Rosa chinensis HOM05D000279 ORTHO05D000498 2.9e-09 65.9 191 27.2
TPR.G29363 Trifolium pratense HOM05D000279 ORTHO05D000498 2.9e-09 65.9 137 34.3
FAN18G1787 Fragaria x ananassa HOM05D000279 ORTHO05D000498 5.0e-09 65.1 62 53.2
RcHm_v2.0_Chr1g0330191 Rosa chinensis HOM05D000279 ORTHO05D000498 5.0e-09 65.1 190 27.9
arahy.Tifrunner.gnm1.ann1.JJX8CS Arachis hypogaea HOM05D000279 ORTHO05D000498 8.6e-09 64.3 96 39.6
FAN03G1959 Fragaria x ananassa HOM05D000279 ORTHO05D000498 1.1e-08 63.9 52 59.6
MD07G1051800 Malus domestica HOM05D000279 ORTHO05D000498 1.1e-08 63.9 46 63.0
RcHm_v2.0_Chr5g0041511 Rosa chinensis HOM05D000279 ORTHO05D000498 1.1e-08 63.9 122 31.1
MD00G1065300 Malus domestica HOM05D000279 ORTHO05D000498 1.5e-08 63.5 47 63.8
MD07G1085500 Malus domestica HOM05D000279 ORTHO05D000498 1.5e-08 63.5 47 63.8
Psat1g190680 Pisum sativum HOM05D000279 ORTHO05D000498 1.5e-08 63.5 125 36.8
Psat3g026640 Pisum sativum HOM05D000279 ORTHO05D000498 1.5e-08 63.5 77 45.5
MD00G1065000 Malus domestica HOM05D000279 ORTHO05D000498 1.9e-08 63.2 47 61.7
MD07G1051000 Malus domestica HOM05D000279 ORTHO05D000498 1.9e-08 63.2 47 61.7
arahy.Tifrunner.gnm1.ann1.HDRR2R Arachis hypogaea HOM05D000279 ORTHO05D000498 2.5e-08 62.8 115 39.1
MD07G1085400 Malus domestica HOM05D000279 ORTHO05D000498 2.5e-08 62.8 47 61.7
arahy.Tifrunner.gnm1.ann1.B3AK4H Arachis hypogaea HOM05D000279 ORTHO05D000498 3.3e-08 62.4 117 36.8
FvH4_7g04760 Fragaria vesca HOM05D000279 ORTHO05D000498 3.3e-08 62.4 52 57.7
FAN06G1972 Fragaria x ananassa HOM05D000279 ORTHO05D000498 3.3e-08 62.4 52 57.7
Lj5g0001153 Lotus japonicus HOM05D000279 ORTHO05D000498 3.3e-08 62.4 86 44.2
MD02G1267800 Malus domestica HOM05D000279 ORTHO05D000498 3.3e-08 62.4 54 51.9
FvH4_5g29370 Fragaria vesca HOM05D000660 ORTHO05D000498 4.3e-08 62.0 62 51.6
FAN06G0166 Fragaria x ananassa HOM05D000279 ORTHO05D000498 4.3e-08 62.0 52 57.7
MD07G1051100 Malus domestica HOM05D000279 ORTHO05D000498 4.3e-08 62.0 52 55.8
RcHm_v2.0_Chr1g0330121 Rosa chinensis HOM05D000279 ORTHO05D000498 4.3e-08 62.0 52 57.7
RcHm_v2.0_Chr1g0330181 Rosa chinensis HOM05D000279 ORTHO05D000498 5.6e-08 61.6 196 26.5
arahy.Tifrunner.gnm1.ann1.B5UF84 Arachis hypogaea HOM05D000279 ORTHO05D000498 7.3e-08 61.2 107 35.5
arahy.Tifrunner.gnm1.ann1.ER1HM3 Arachis hypogaea HOM05D000279 ORTHO05D000498 9.5e-08 60.8 115 37.4
VMungo0582G0001 Vigna mungo HOM05D000279 ORTHO05D000498 9.5e-08 60.8 77 39.0
RcHm_v2.0_Chr6g0252611 Rosa chinensis HOM05D000366 ORTHO05D000437 1.2e-07 60.5 61 49.2
FvH4_7g04741 Fragaria vesca HOM05D000279 ORTHO05D000498 2.1e-07 59.7 52 57.7
Lj6g0011930 Lotus japonicus HOM05D000279 ORTHO05D000498 2.1e-07 59.7 96 41.7
Psat3g025560 Pisum sativum HOM05D000279 ORTHO05D000498 2.1e-07 59.7 120 31.7
arahy.Tifrunner.gnm1.ann1.91HE16 Arachis hypogaea HOM05D000279 ORTHO05D000498 2.8e-07 59.3 105 34.3
RcHm_v2.0_Chr1g0330151 Rosa chinensis HOM05D000279 ORTHO05D000498 2.8e-07 59.3 47 59.6
arahy.Tifrunner.gnm1.ann1.BUD6J0 Arachis hypogaea HOM05D000279 ORTHO05D000498 3.6e-07 58.9 46 60.9
arahy.Tifrunner.gnm1.ann1.ZE2H4F Arachis hypogaea HOM05D000279 ORTHO05D000498 4.7e-07 58.5 104 34.6
RcHm_v2.0_Chr6g0252621 Rosa chinensis HOM05D000366 ORTHO05D000437 6.1e-07 58.2 220 25.0
MD02G1268300 Malus domestica HOM05D000279 ORTHO05D000498 8.0e-07 57.8 59 44.1
TPR.G14401 Trifolium pratense HOM05D000279 ORTHO05D000498 1.0e-06 57.4 104 34.6
FAN20G0706 Fragaria x ananassa HOM05D000279 ORTHO05D000498 2.3e-06 56.2 93 35.5
FvH4_2g03601 Fragaria vesca HOM05D000366 ORTHO05D000498 3.0e-06 55.8 46 54.3
FAN24G2003 Fragaria x ananassa HOM05D000279 ORTHO05D000498 3.0e-06 55.8 46 54.3
VMungo0720G0446 Vigna mungo HOM05D000279 ORTHO05D000498 3.0e-06 55.8 48 52.1
Glyma.19G203800 Glycine max HOM05D000279 ORTHO05D000498 4.0e-06 55.5 153 30.7
arahy.Tifrunner.gnm1.ann1.3933Z3 Arachis hypogaea HOM05D000279 ORTHO05D000498 5.2e-06 55.1 111 35.1
Glyma.02G167600 Glycine max HOM05D000279 ORTHO05D000498 5.2e-06 55.1 47 55.3
RcHm_v2.0_Chr1g0330221 Rosa chinensis HOM05D000279 ORTHO05D000498 5.2e-06 55.1 36 72.2
TPR.G32291 Trifolium pratense HOM05D000279 ORTHO05D000498 5.2e-06 55.1 113 32.7
arahy.Tifrunner.gnm1.ann1.QMFS2J Arachis hypogaea HOM05D000279 ORTHO05D000498 6.8e-06 54.7 102 31.4
TPR.G30776 Trifolium pratense HOM05D000279 ORTHO05D000498 6.8e-06 54.7 161 26.1
arahy.Tifrunner.gnm1.ann1.P65MK0 Arachis hypogaea HOM05D000279 ORTHO05D000498 8.9e-06 54.3 98 33.7
FAN15G0969 Fragaria x ananassa HOM05D000366 ORTHO05D000498 8.9e-06 54.3 72 40.3


User provided reference genes

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