Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 6.8e-182 640.6 332 100.0
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 2.6e-181 638.6 332 99.7
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 7.5e-181 637.1 332 99.4
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 1.4e-174 616.3 327 96.9
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 1.1e-168 596.7 332 93.1
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 2.6e-165 585.5 332 90.1
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 2.2e-164 582.4 329 90.6
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 1.9e-163 579.3 327 89.6
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 1.9e-163 579.3 332 89.5
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 2.4e-163 578.9 330 89.1
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 3.2e-163 578.6 335 88.7
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 4.1e-163 578.2 332 89.2
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 4.1e-163 578.2 327 90.2
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 1.2e-162 576.6 332 90.7
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 2.7e-162 575.5 327 89.0
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 2.7e-162 575.5 329 88.8
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 2.7e-162 575.5 325 89.8
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 4.6e-162 574.7 329 89.4
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 6.0e-162 574.3 329 89.7
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.0e-161 573.5 332 88.3
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.7e-161 572.8 335 89.0
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.7e-161 572.8 335 89.0
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 2.3e-161 572.4 327 88.7
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 2.3e-161 572.4 329 89.4
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 3.9e-161 571.6 329 88.1
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 1.5e-160 569.7 332 88.0
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 9.5e-160 567.0 327 87.5
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 1.2e-159 566.6 328 87.8
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 1.1e-158 563.5 331 87.9
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 1.4e-158 563.1 332 87.3
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 2.3e-158 562.4 332 85.2
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 4.0e-158 561.6 332 84.9
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 5.2e-158 561.2 332 84.9
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 6.8e-158 560.8 332 86.7
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 1.5e-157 559.7 332 86.4
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 2.0e-157 559.3 332 86.4
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 2.6e-157 558.9 332 86.7
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 9.9e-157 557.0 327 85.9
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 1.3e-156 556.6 332 84.3
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 1.7e-156 556.2 338 85.8
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.7e-156 556.2 332 84.9
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.2e-156 555.8 327 85.6
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.2e-156 555.8 327 85.6
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.9e-156 555.4 331 86.7
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 2.9e-156 555.4 327 86.9
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 3.7e-156 555.1 327 87.2
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 3.7e-156 555.1 332 84.0
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.9e-156 554.7 332 84.3
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 4.9e-156 554.7 327 85.3
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.9e-156 554.7 331 86.7
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 4.9e-156 554.7 332 84.0
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 6.4e-156 554.3 332 84.0
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 6.4e-156 554.3 332 85.2
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 6.4e-156 554.3 327 85.3
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 8.3e-156 553.9 332 85.8
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 8.3e-156 553.9 332 85.8
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.1e-155 553.5 332 83.4
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 1.4e-155 553.1 329 86.0
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 1.4e-155 553.1 329 86.0
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 2.4e-155 552.4 327 84.1
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 2.4e-155 552.4 329 85.7
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 3.2e-155 552.0 329 85.7
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 3.2e-155 552.0 332 84.6
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 4.1e-155 551.6 329 85.7
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 4.1e-155 551.6 329 85.7
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 4.1e-155 551.6 329 85.7
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 4.1e-155 551.6 329 85.7
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 4.1e-155 551.6 329 85.7
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 5.4e-155 551.2 331 85.5
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 9.2e-155 550.4 332 83.1
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.2e-154 550.1 329 85.4
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.6e-154 549.7 325 85.2
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 2.1e-154 549.3 329 85.1
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 2.1e-154 549.3 325 86.5
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 2.7e-154 548.9 327 83.5
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 3.5e-154 548.5 373 79.4
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 3.5e-154 548.5 333 83.2
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 4.6e-154 548.1 328 83.2
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 4.6e-154 548.1 327 83.5
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 7.8e-154 547.4 326 84.7
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 7.8e-154 547.4 359 78.8
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 1.0e-153 547.0 328 86.0
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 2.3e-153 545.8 333 83.2
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 2.3e-153 545.8 327 84.7
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 3.9e-153 545.0 386 75.6
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 1.9e-152 542.7 328 82.9
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 2.5e-152 542.3 332 84.6
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 1.8e-150 536.2 327 82.9
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 2.3e-150 535.8 455 65.9
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 8.9e-150 533.9 331 82.2
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.2e-149 533.5 314 86.0
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 2.6e-149 532.3 331 81.9
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 5.8e-149 531.2 325 83.7
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 9.9e-149 530.4 329 83.0
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.4e-147 525.8 331 83.1
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 7.1e-147 524.2 332 84.9
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 1.2e-146 523.5 330 83.0
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.5e-144 515.8 304 85.9
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 2.4e-142 509.2 327 79.2
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 2.0e-141 506.1 328 79.6
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 2.2e-140 502.7 327 80.4
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.9e-140 502.3 377 73.5
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 7.1e-139 497.7 300 82.7
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 7.3e-136 487.6 330 75.5
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 2.1e-135 486.1 327 74.6
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 6.2e-135 484.6 332 77.7
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.8e-134 483.0 302 82.5
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 7.9e-130 467.6 326 73.0
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 5.1e-129 464.9 328 75.0
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 8.7e-129 464.2 326 74.8
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 2.6e-125 452.6 333 73.3
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 5.8e-125 451.4 279 81.7
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 4.6e-114 415.2 323 69.3
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 7.4e-112 407.9 324 61.4
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 1.2e-109 400.6 234 87.2
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 1.3e-108 397.1 331 62.5
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 2.2e-108 396.4 318 62.6
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.5e-104 382.9 233 82.0
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 7.4e-104 381.3 274 74.1
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 1.7e-103 380.2 315 66.3
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 7.9e-98 361.3 332 66.0
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 6.5e-92 341.7 197 89.8
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 2.5e-91 339.7 335 60.3
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 7.4e-88 328.2 235 69.4
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 6.3e-87 325.1 224 74.6
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 2.6e-85 319.7 220 79.1
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.5e-83 313.9 220 77.3
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 1.7e-79 300.4 220 75.9
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 2.7e-77 293.1 167 86.2
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 3.0e-73 279.6 333 45.3
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 3.0e-73 279.6 164 87.8
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.2e-69 267.7 164 81.1
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 1.6e-69 267.3 329 52.3
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 3.6e-66 256.1 266 56.8
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 6.1e-66 255.4 135 94.1
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 6.6e-60 235.3 135 91.1
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.7e-47 194.1 103 93.2
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 2.3e-44 183.7 161 64.0
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 4.7e-42 176.0 147 63.3
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 1.2e-40 171.4 92 96.7
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 7.8e-37 158.7 181 53.0
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 2.3e-36 157.1 87 89.7
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 2.5e-35 153.7 103 77.7
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 2.6e-32 143.7 88 79.5
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 2.6e-32 143.7 77 93.5
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 1.3e-31 141.4 91 82.4
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 3.8e-31 139.8 69 94.2
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 1.7e-28 131.0 110 62.7
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 1.7e-28 131.0 74 86.5
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 3.9e-28 129.8 72 87.5
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 1.4e-25 121.3 67 95.5
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.0e-25 119.8 75 77.3
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 4.4e-24 116.3 69 85.5
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 9.9e-24 115.2 151 47.0
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 2.1e-21 107.5 65 86.2
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 4.8e-10 69.7 85 51.8
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 4.5e-08 63.2 34 85.3
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 5.8e-08 62.8 33 87.9


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