Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G2271 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.9e-215 752.3 390 100.0
FAN06G4290 Fragaria x ananassa HOM05D005676 ORTHO05D007375 7.6e-132 474.6 493 60.4
FvH4_7g16470 Fragaria vesca HOM05D005676 ORTHO05D007375 1.7e-131 473.4 493 60.2
FAN06G1134 Fragaria x ananassa HOM05D005676 ORTHO05D007375 2.2e-131 473.0 493 60.2
FAN03G1248 Fragaria x ananassa HOM05D005676 ORTHO05D007375 6.0e-129 464.9 494 59.7
FAN10G1066 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.0e-128 464.2 494 59.7
FAN10G0710 Fragaria x ananassa HOM05D005676 ORTHO05D007375 5.6e-127 458.4 494 58.9
RcHm_v2.0_Chr1g0359591 Rosa chinensis HOM05D005676 ORTHO05D007375 1.3e-115 420.6 489 55.4
FAN03G3457 Fragaria x ananassa HOM05D005676 ORTHO05D007375 2.7e-97 359.8 279 74.6
Prupe.2G189000 Prunus persica HOM05D005676 ORTHO05D007375 1.7e-78 297.4 511 43.2
FAN06G1105 Fragaria x ananassa HOM05D005676 ORTHO05D007375 3.7e-62 243.0 221 66.5
FvH4_7g16560 Fragaria vesca HOM05D005676 ORTHO05D007375 4.8e-62 242.7 221 65.6
MD01G1081300 Malus domestica HOM05D005676 ORTHO05D007375 8.2e-62 241.9 499 40.1
Haze_15661 Corylus avellana HOM05D005676 ORTHO05D007375 8.0e-57 225.3 508 34.8
Cfa003798 Carpinus fangiana HOM05D005676 ORTHO05D007375 1.5e-55 221.1 506 34.2
Atru.chr5.673 Acer truncatum HOM05D005676 ORTHO05D007375 3.2e-50 203.4 503 34.6
FvH4_7g16531 Fragaria vesca HOM05D005676 ORTHO05D007375 2.1e-49 200.7 290 49.3
Gohir.D11G101600 Gossypium hirsutum HOM05D005676 ORTHO05D007375 3.6e-49 199.9 511 35.2
Thecc.01G342000 Theobroma cacao HOM05D005676 ORTHO05D007375 6.1e-49 199.1 510 32.9
MD07G1150200 Malus domestica HOM05D005676 ORTHO05D007375 1.0e-48 198.4 340 42.4
Gohir.A11G096900 Gossypium hirsutum HOM05D005676 ORTHO05D007375 1.4e-48 198.0 512 35.2
CiPaw.02G041000 Carya illinoinensis HOM05D005676 ORTHO05D007375 2.3e-48 197.2 505 33.7
Gorai.007G108400 Gossypium raimondii HOM05D005676 ORTHO05D007375 4.0e-48 196.4 511 34.6
COL.COLO4_06282 Corchorus olitorius HOM05D005676 ORTHO05D007375 6.8e-48 195.7 506 34.2
Cpa.g.sc96.24 Carica papaya HOM05D005676 ORTHO05D007375 8.3e-46 188.7 496 33.3
QL04p060782 Quercus lobata HOM05D005676 ORTHO05D007375 1.6e-44 184.5 508 32.9
Sed0007378 Sechium edule HOM05D005676 ORTHO05D007375 2.7e-44 183.7 477 33.1
Potri.014G099100 Populus trichocarpa HOM05D005676 ORTHO05D007375 1.7e-43 181.0 493 32.5
Duzib268G0021 Durio zibethinus HOM05D005676 ORTHO05D007375 1.5e-42 177.9 537 32.6
PGR031G0643 Punica granatum HOM05D005676 ORTHO05D007375 3.6e-41 173.3 472 33.3
ClCG05G000790 Citrullus lanatus HOM05D005676 ORTHO05D007375 6.1e-41 172.6 492 32.1
Manes.01G246200 Manihot esculenta HOM05D005676 ORTHO05D007375 1.8e-40 171.0 494 30.8
Dinv32595 Davidia involucrata HOM05D005676 ORTHO05D007375 2.3e-40 170.6 591 30.1
Sabra14G0072700 Salix brachista HOM05D005676 ORTHO05D007375 1.2e-39 168.3 492 31.7
Ciclev10023383m.g Citrus clementina HOM05D005676 ORTHO05D007375 4.4e-39 166.4 501 32.1
GSVIVG01027152001 Vitis vinifera HOM05D005676 ORTHO05D007375 1.7e-38 164.5 406 36.9
TAR636G2851 Trochodendron aralioides HOM05D005676 ORTHO05D007375 1.8e-37 161.0 529 29.9
MELO3C006021.2 Cucumis melo HOM05D005676 ORTHO05D007375 9.2e-37 158.7 494 30.2
Nn1g00247 Nelumbo nucifera HOM05D005676 ORTHO05D007375 9.2e-37 158.7 475 31.2
Lsat_1_v5_gn_3_140321 Lactuca sativa HOM05D005676 ORTHO05D007375 2.3e-35 154.1 364 35.4
Carub.0005s2852 Capsella rubella HOM05D005676 ORTHO05D007375 3.0e-35 153.7 503 31.8
CsaV3_3G008030 Cucumis sativus L. HOM05D005676 ORTHO05D007375 3.9e-35 153.3 494 29.1
A07p25740 Brassica napus HOM05D005676 ORTHO05D007375 1.1e-34 151.8 481 31.2
BraA07t30214Z Brassica rapa HOM05D005676 ORTHO05D007375 1.1e-34 151.8 481 31.2
Oeu043238.1 Olea europaea HOM05D005676 ORTHO05D007375 1.1e-34 151.8 453 30.7
CARHR172110 Cardamine hirsuta HOM05D005676 ORTHO05D007375 1.9e-34 151.0 403 34.2
SalBow6G4948 Salvia bowleyana HOM05D005676 ORTHO05D007375 2.5e-34 150.6 409 33.3
BcaC08g45161 Brassica carinata HOM05D005676 ORTHO05D007375 4.3e-34 149.8 475 32.0
C06p27960 Brassica napus HOM05D005676 ORTHO05D007375 4.3e-34 149.8 475 32.0
BolC6t37957H Brassica oleracea HOM05D005676 ORTHO05D007375 9.5e-34 148.7 476 32.1
ECA246G1832 Erigeron canadensis HOM05D000467 ORTHO05D000379 1.0e-32 145.2 381 33.9
Eucgr.D02379 Eucalyptus grandis HOM05D005676 ORTHO05D007375 1.0e-32 145.2 487 30.8
HanXRQChr11g0352981 Helianthus annuus HOM05D005676 ORTHO05D007375 1.8e-32 144.4 404 33.2
Lj3g0008614 Lotus japonicus HOM05D005676 ORTHO05D007375 1.8e-32 144.4 580 26.6
AL5G44340 Arabidopsis lyrata HOM05D005676 ORTHO05D007375 3.1e-32 143.7 507 30.0
Thhalv10005757m.g Eutrema salsugineum HOM05D005676 ORTHO05D007375 1.5e-31 141.4 447 30.9
Hma1.2p1_0139F.1_g063260 Hydrangea macrophylla HOM05D005676 ORTHO05D007375 1.5e-31 141.4 245 39.2
Sc01g0002640 Simmondsia chinensis HOM05D005676 ORTHO05D007375 1.5e-31 141.4 605 27.4
arahy.Tifrunner.gnm1.ann1.L1WQQA Arachis hypogaea HOM05D005676 ORTHO05D007375 2.0e-31 141.0 583 27.4
arahy.Tifrunner.gnm1.ann1.FH2LCI Arachis hypogaea HOM05D005676 ORTHO05D007375 3.4e-31 140.2 584 27.4
Peaxi162Scf00786g00018 Petunia axillaris HOM05D005676 ORTHO05D007375 9.8e-31 138.7 508 27.8
BcaC08g45164 Brassica carinata HOM05D005676 ORTHO05D007375 1.7e-30 137.9 423 31.2
CSS0030996 Camellia sinensis var. sinensis HOM05D005676 ORTHO05D007375 1.4e-29 134.8 138 53.6
THA.LOC104817362 Tarenaya hassleriana HOM05D005676 ORTHO05D007375 1.9e-29 134.4 511 28.2
Aqoxy7G00081 Aquilegia oxysepala HOM05D005676 ORTHO05D007375 9.2e-29 132.1 270 37.0
MSTRG.17345 Avicennia marina HOM05D005676 ORTHO05D007375 1.2e-28 131.7 518 27.2
AUR62023455 Chenopodium quinoa HOM05D005676 ORTHO05D007375 1.6e-28 131.3 137 54.0
Sp5g01590 Schrenkiella parvula HOM05D005676 ORTHO05D007375 2.7e-28 130.6 512 28.7
Lalb_Chr17g0342721 Lupinus albus HOM05D005676 ORTHO05D007375 1.0e-27 128.6 602 26.6
Nitab4.5_0000172g0490 Nicotiana tabacum HOM05D005676 ORTHO05D007375 1.7e-27 127.9 529 27.4
AT3G61780 Arabidopsis thaliana HOM05D005676 ORTHO05D007375 2.3e-27 127.5 506 30.0
SalBow3G4648 Salvia bowleyana HOM05D005676 ORTHO05D007375 3.0e-27 127.1 231 39.4
AUR62004498 Chenopodium quinoa HOM05D005676 ORTHO05D007375 3.9e-27 126.7 150 51.3
Actinidia10141 Actinidia chinensis HOM05D005676 ORTHO05D007375 5.0e-27 126.3 137 52.6
DCAR_005392 Daucus carota HOM05D005676 ORTHO05D007375 5.0e-27 126.3 578 27.2
Aa31LG10G15770 Aethionema arabicum HOM05D005676 ORTHO05D007375 6.6e-27 125.9 433 30.0
MBI06_g46583_MAGBIO Magnolia biondii HOM05D005676 ORTHO05D007375 6.6e-27 125.9 510 29.2
Hund16716 Selenicereus undatus HOM05D005676 ORTHO05D007375 1.1e-26 125.2 214 40.7
Nitab4.5_0013740g0030 Nicotiana tabacum HOM05D005676 ORTHO05D007375 1.9e-26 124.4 522 26.8
Glyma.16G024100 Glycine max HOM05D005676 ORTHO05D007375 3.3e-26 123.6 136 50.0
Migut.B01876 Erythranthe guttata HOM05D005676 ORTHO05D007375 4.3e-26 123.2 407 30.7
SGA_v2.0_scaffold5G03020 Striga asiatica HOM05D005676 ORTHO05D007375 4.3e-26 123.2 485 28.0
Solyc01g096010.4 Solanum lycopersicum HOM05D005676 ORTHO05D007375 5.6e-26 122.9 542 26.9
Sopen01g039730 Solanum pennellii HOM05D005676 ORTHO05D007375 5.6e-26 122.9 571 26.8
Ah.05g179510 Amaranthus hybridus HOM05D005676 ORTHO05D007375 7.3e-26 122.5 205 42.4
PGSC0003DMG400000228 Solanum tuberosum HOM05D005676 ORTHO05D007375 7.3e-26 122.5 571 26.1
EL10Ac1g00264 Beta vulgaris HOM05D005676 ORTHO05D007375 2.1e-25 120.9 146 47.9
VMungo0331G0849 Vigna mungo HOM05D005676 ORTHO05D007375 2.1e-25 120.9 231 38.5
Medtr8g027605 Medicago truncatula HOM05D005676 ORTHO05D007375 2.8e-25 120.6 535 24.9
TPR.G16793 Trifolium pratense HOM05D005676 ORTHO05D007375 3.6e-25 120.2 557 26.6
Cc02_g39430 Coffea canephora HOM05D005676 ORTHO05D007375 4.7e-25 119.8 565 26.2
Lj9A598G65 Lonicera japonica HOM05D005676 ORTHO05D007375 4.7e-25 119.8 510 27.1
Ca_23531_v3 Cicer arietinum L. HOM05D005676 ORTHO05D007375 6.2e-25 119.4 538 24.9
CDE02G4093 Ceratophyllum demersum HOM05D005676 ORTHO05D007375 2.3e-24 117.5 226 37.2
CAN.G1415.28 Capsicum annuum HOM05D005676 ORTHO05D007375 5.2e-24 116.3 541 26.4
ATR0602G016 Amborella trichopoda HOM05D005676 ORTHO05D007375 8.9e-24 115.5 117 52.1
Actinidia20244 Actinidia chinensis HOM05D005676 ORTHO05D007375 2.6e-23 114.0 171 45.0
Phvul.010G114600 Phaseolus vulgaris HOM05D005676 ORTHO05D007375 2.6e-23 114.0 231 38.1
Oeu007893.1 Olea europaea HOM05D005676 ORTHO05D007375 6.4e-22 109.4 130 46.2
AT5G28400 Arabidopsis thaliana HOM05D005676 ORTHO05D007375 6.0e-20 102.8 453 29.6
unitig_899.g14797 Utricularia gibba HOM05D005676 ORTHO05D007375 3.9e-19 100.1 489 24.5
Psat4g161440 Pisum sativum HOM05D005676 ORTHO05D007375 1.1e-16 92.0 405 27.2
FAN03G0940 Fragaria x ananassa HOM05D005676 ORTHO05D007375 3.4e-15 87.0 91 61.5
Glyma.07G055432 Glycine max HOM05D005676 ORTHO05D007375 2.4e-13 80.9 58 63.8
AL5G43810 Arabidopsis lyrata HOM05D005676 ORTHO05D007375 2.1e-09 67.8 77 48.1
AT5G28320 Arabidopsis thaliana HOM05D005676 ORTHO05D007375 2.2e-06 57.8 393 27.2


User provided reference genes

Program Settings