Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G2201 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.8e-87 325.9 160 100.0
FAN12G0591 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.2e-46 190.3 157 68.8
FAN24G2717 Fragaria x ananassa HOM05D006199 ORTHO05D006558 3.4e-38 162.2 141 66.0
FAN20G1063 Fragaria x ananassa HOM05D006199 ORTHO05D006558 2.2e-37 159.5 139 66.2
FvH4_2g01260 Fragaria vesca HOM05D006199 ORTHO05D006558 3.2e-36 155.6 139 64.7
FvH4_4g14930 Fragaria vesca HOM05D006199 ORTHO05D006558 3.2e-36 155.6 114 73.7
FAN27G0272 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.6e-35 153.3 139 64.7
RcHm_v2.0_Chr6g0251921 Rosa chinensis HOM05D006199 ORTHO05D006558 7.8e-35 151.0 139 63.3
FAN06G5031 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.0e-34 150.6 133 65.4
FAN24G0607 Fragaria x ananassa HOM05D006199 ORTHO05D006558 3.8e-29 132.1 89 78.7
Phvul.009G119500 Phaseolus vulgaris HOM05D006199 ORTHO05D006558 9.6e-25 117.5 137 50.4
FAN14G5753 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.4e-23 113.6 134 52.2
VMungo1309G0102 Vigna mungo HOM05D006199 ORTHO05D006558 1.8e-23 113.2 137 47.4
MD10G1095100 Malus domestica HOM05D006199 ORTHO05D006558 3.1e-23 112.5 147 49.7
CiPaw.05G081500 Carya illinoinensis HOM05D006199 ORTHO05D006558 3.4e-22 109.0 147 49.0
Glyma.04G003800 Glycine max HOM05D006199 ORTHO05D006558 1.3e-21 107.1 135 48.1
ClCG02G011890 Citrullus lanatus HOM05D006199 ORTHO05D006558 1.7e-21 106.7 150 44.0
Prupe.8G164900 Prunus persica HOM05D006199 ORTHO05D006558 2.2e-21 106.3 118 51.7
Cfa005236 Carpinus fangiana HOM05D006199 ORTHO05D006558 3.8e-21 105.5 146 45.9
CsaV3_2G016060 Cucumis sativus L. HOM05D006199 ORTHO05D006558 3.8e-21 105.5 150 42.7
GSVIVG01024030001 Vitis vinifera HOM05D006199 ORTHO05D006558 4.9e-21 105.1 142 47.9
Duzib132G0247 Durio zibethinus HOM05D006199 ORTHO05D006558 8.4e-21 104.4 139 43.9
Haze_02147 Corylus avellana HOM05D006199 ORTHO05D006558 1.1e-20 104.0 146 45.2
TWI75G1548 Tripterygium wilfordii HOM05D006199 ORTHO05D006558 1.1e-20 104.0 141 46.8
Oeu050364.1 Olea europaea HOM05D006199 ORTHO05D006558 1.4e-20 103.6 146 46.6
Eucgr.I01413 Eucalyptus grandis HOM05D006199 ORTHO05D006558 1.9e-20 103.2 140 45.7
COL.COLO4_17328 Corchorus olitorius HOM05D006199 ORTHO05D006558 2.5e-20 102.8 139 43.2
Sabra09G0104300 Salix brachista HOM05D006199 ORTHO05D006558 2.5e-20 102.8 141 45.4
Gohir.D01G159100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 3.2e-20 102.4 139 48.2
Gorai.002G197400 Gossypium raimondii HOM05D006199 ORTHO05D006558 3.2e-20 102.4 139 48.2
QL11p050170 Quercus lobata HOM05D006199 ORTHO05D006558 5.5e-20 101.7 146 45.9
PGR142G1980 Punica granatum HOM05D006199 ORTHO05D006558 7.1e-20 101.3 139 42.4
Hund00025 Selenicereus undatus HOM05D006199 ORTHO05D006558 7.1e-20 101.3 142 45.1
Solyc01g111550.3 Solanum lycopersicum HOM05D006199 ORTHO05D006558 1.2e-19 100.5 152 44.1
CANSAT25G2535 Cannabis sativa HOM05D006199 ORTHO05D006558 1.6e-19 100.1 139 48.9
Gohir.A01G168100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 2.7e-19 99.4 145 46.2
Nitab4.5_0006645g0060 Nicotiana tabacum HOM05D006199 ORTHO05D006558 3.5e-19 99.0 152 45.4
Potri.009G134500 Populus trichocarpa HOM05D006199 ORTHO05D006558 3.5e-19 99.0 141 45.4
Sed0003263 Sechium edule HOM05D006199 ORTHO05D006558 3.5e-19 99.0 135 43.7
Cc02_g16220 Coffea canephora HOM05D006199 ORTHO05D006558 4.6e-19 98.6 144 43.8
DCAR_022808 Daucus carota HOM05D006199 ORTHO05D006558 4.6e-19 98.6 188 41.5
Lj1g0009253 Lotus japonicus HOM05D006199 ORTHO05D006558 4.6e-19 98.6 144 44.4
Sopen01g053590 Solanum pennellii HOM05D006199 ORTHO05D006558 6.0e-19 98.2 152 43.4
Dinv41943 Davidia involucrata HOM05D006199 ORTHO05D006558 7.9e-19 97.8 167 41.3
PGSC0003DMG400006190 Solanum tuberosum HOM05D006199 ORTHO05D006558 1.3e-18 97.1 152 43.4
arahy.Tifrunner.gnm1.ann1.H9ZTXG Arachis hypogaea HOM05D006199 ORTHO05D006558 1.8e-18 96.7 142 43.0
Actinidia00620 Actinidia chinensis HOM05D006199 ORTHO05D006558 2.3e-18 96.3 148 44.6
Nitab4.5_0005853g0010 Nicotiana tabacum HOM05D006199 ORTHO05D006558 2.3e-18 96.3 152 44.7
Cpa.g.sc37.143 Carica papaya HOM05D006199 ORTHO05D006558 3.0e-18 95.9 141 42.6
Ciclev10028644m.g Citrus clementina HOM05D006199 ORTHO05D006558 3.0e-18 95.9 146 41.8
arahy.Tifrunner.gnm1.ann1.WS10KT Arachis hypogaea HOM05D006199 ORTHO05D006558 3.9e-18 95.5 142 42.3
Lsat_1_v5_gn_4_71580 Lactuca sativa HOM05D006199 ORTHO05D006558 3.9e-18 95.5 146 43.2
Lj5A179T83 Lonicera japonica HOM05D006199 ORTHO05D006558 3.9e-18 95.5 138 46.4
CAN.G588.74 Capsicum annuum HOM05D006199 ORTHO05D006558 5.1e-18 95.1 148 43.2
Thhalv10000193m.g Eutrema salsugineum HOM05D006199 ORTHO05D006558 6.7e-18 94.7 137 43.8
SHI05731 Sapria himalayana HOM05D006199 ORTHO05D006558 1.1e-17 94.0 141 42.6
EL10Ac9g21386 Beta vulgaris HOM05D006199 ORTHO05D006558 2.5e-17 92.8 140 40.0
Ca_15302_v3 Cicer arietinum L. HOM05D006199 ORTHO05D006558 2.5e-17 92.8 123 45.5
Peaxi162Scf00362g00651 Petunia axillaris HOM05D006199 ORTHO05D006558 2.5e-17 92.8 146 43.8
AUR62013038 Chenopodium quinoa HOM05D006199 ORTHO05D006558 5.6e-17 91.7 141 39.7
Aa31LG7G15660 Aethionema arabicum HOM05D006199 ORTHO05D006558 7.4e-17 91.3 181 36.5
Manes.04G075600 Manihot esculenta HOM05D006199 ORTHO05D006558 7.4e-17 91.3 130 41.5
AUR62010046 Chenopodium quinoa HOM05D006199 ORTHO05D006558 9.6e-17 90.9 140 40.0
MELO3C020815.2 Cucumis melo HOM05D006199 ORTHO05D006558 9.6e-17 90.9 199 34.7
A03p27410 Brassica napus HOM05D006199 ORTHO05D006558 1.3e-16 90.5 141 44.7
HanXRQChr10g0300911 Helianthus annuus HOM05D006199 ORTHO05D006558 1.3e-16 90.5 146 42.5
Sp4g00170 Schrenkiella parvula HOM05D006199 ORTHO05D006558 1.3e-16 90.5 137 41.6
TPR.G38477 Trifolium pratense HOM05D006199 ORTHO05D006558 1.3e-16 90.5 139 41.7
AL4G10110 Arabidopsis lyrata HOM05D006199 ORTHO05D006558 1.6e-16 90.1 145 40.7
ECA234G0878 Erigeron canadensis HOM05D006199 ORTHO05D006558 1.6e-16 90.1 166 38.6
Nn5g30772 Nelumbo nucifera HOM05D006199 ORTHO05D006558 2.1e-16 89.7 145 44.1
BcaC01g04861 Brassica carinata HOM05D006199 ORTHO05D006558 2.8e-16 89.4 138 44.9
C03p33040 Brassica napus HOM05D006199 ORTHO05D006558 2.8e-16 89.4 138 44.9
Carub.0004s0005 Capsella rubella HOM05D006199 ORTHO05D006558 2.8e-16 89.4 146 39.7
MSTRG.19995 Avicennia marina HOM05D006199 ORTHO05D006558 3.7e-16 89.0 140 39.3
BolC3t15631H Brassica oleracea HOM05D006199 ORTHO05D006558 3.7e-16 89.0 138 44.2
Thecc.02G060900 Theobroma cacao HOM05D006199 ORTHO05D006558 3.7e-16 89.0 139 39.6
AT2G20980 Arabidopsis thaliana HOM05D006199 ORTHO05D006558 4.8e-16 88.6 146 39.0
BraA03t11952Z Brassica rapa HOM05D006199 ORTHO05D006558 1.4e-15 87.0 141 43.3
Rhsim11G0191800 Rhododendron simsii HOM05D006199 ORTHO05D006558 1.4e-15 87.0 147 41.5
Ah.01g022950 Amaranthus hybridus HOM05D006199 ORTHO05D006558 6.9e-15 84.7 141 38.3
CARHR111860 Cardamine hirsuta HOM05D006199 ORTHO05D006558 9.0e-15 84.3 150 38.0
CSS0017687 Camellia sinensis var. sinensis HOM05D006199 ORTHO05D006558 1.5e-14 83.6 158 37.3
CiPaw.06G122500 Carya illinoinensis HOM05D006199 ORTHO05D006558 1.5e-14 83.6 127 37.8
Sc18g0006460 Simmondsia chinensis HOM05D006199 ORTHO05D006558 1.5e-14 83.6 123 40.7
Medtr3g117880 Medicago truncatula HOM05D006199 ORTHO05D006558 3.4e-14 82.4 137 40.1
THA.LOC104807811 Tarenaya hassleriana HOM05D006199 ORTHO05D006558 4.5e-14 82.0 140 37.1
Migut.B00085 Erythranthe guttata HOM05D006199 ORTHO05D006558 1.0e-13 80.9 137 38.7
vmacro02274 Vaccinium macrocarpon HOM05D006199 ORTHO05D006558 1.0e-13 80.9 152 38.2
SalBow1G2578 Salvia bowleyana HOM05D006199 ORTHO05D006558 2.2e-13 79.7 154 37.7
PSO675G4200 Papaver somniferum HOM05D006199 ORTHO05D006558 8.4e-13 77.8 147 34.7
TAR628G1195 Trochodendron aralioides HOM05D006199 ORTHO05D006558 1.4e-12 77.0 131 39.7
FAN11G3400 Fragaria x ananassa HOM05D006199 ORTHO05D006558 2.5e-12 76.3 72 59.7
FvH4_2g23470 Fragaria vesca HOM05D006199 ORTHO05D006558 3.2e-12 75.9 37 97.3
PSO541G4917 Papaver somniferum HOM05D006199 ORTHO05D006558 4.2e-12 75.5 147 34.0
AUR62027127 Chenopodium quinoa HOM05D006199 ORTHO05D006558 5.5e-12 75.1 117 43.6
FvH4_1g02330 Fragaria vesca HOM05D006199 ORTHO05D006558 1.6e-11 73.6 37 94.6
RcHm_v2.0_Chr5g0048301 Rosa chinensis HOM05D006199 ORTHO05D006558 4.6e-11 72.0 69 58.0
FAN14G4166 Fragaria x ananassa HOM05D006199 ORTHO05D006558 7.9e-11 71.2 37 91.9
MBI08_g14630_MAGBIO Magnolia biondii HOM05D006199 ORTHO05D006558 1.0e-10 70.9 152 37.5
unitig_37.g12834 Utricularia gibba HOM05D006199 ORTHO05D006558 1.0e-10 70.9 139 32.4
Zm00001eb331950 Zea mays HOM05D006199 ORTHO05D006558 3.9e-10 68.9 124 37.1
FvH4_5g37420 Fragaria vesca HOM05D006199 ORTHO05D006558 5.1e-10 68.6 33 93.9
FvH4_7g17270 Fragaria vesca HOM05D006199 ORTHO05D006558 5.1e-10 68.6 62 59.7
ATR0078G008 Amborella trichopoda HOM05D006199 ORTHO05D006558 8.7e-10 67.8 146 35.6
Lalb_Chr23g0265011 Lupinus albus HOM05D006199 ORTHO05D006558 2.5e-09 66.2 88 45.5
Atru.chr5.3311 Acer truncatum HOM05D006199 ORTHO05D006558 3.3e-09 65.9 129 37.2
Os09g0539400 Oryza sativa ssp. japonica HOM05D006199 ORTHO05D006558 2.8e-08 62.8 125 35.2
Aqoxy6G02177 Aquilegia oxysepala HOM05D006199 ORTHO05D006558 3.7e-08 62.4 172 33.7
Mapoly0068s0001 Marchantia polymorpha HOM05D006199 ORTHO05D006558 4.1e-07 58.9 144 27.8
BcaB07g29803 Brassica carinata HOM05D006199 ORTHO05D006558 5.3e-07 58.5 139 33.8


User provided reference genes

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