Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G2191 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.5e-109 399.4 191 100.0
FAN06G0675 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.2e-83 312.0 265 63.0
FAN06G3231 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.2e-83 310.5 265 62.6
FvH4_7g31431 Fragaria vesca HOM05D001729 ORTHO05D001155 8.6e-81 303.9 265 62.3
FAN03G2781 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.5e-69 265.0 150 85.3
FAN03G2850 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.5e-69 265.0 150 85.3
FvH4_7g31410 Fragaria vesca HOM05D000630 ORTHO05D001155 1.4e-62 243.4 185 69.7
RcHm_v2.0_Chr1g0380481 Rosa chinensis HOM05D001729 ORTHO05D001155 1.1e-38 164.1 191 47.6
RcHm_v2.0_Chr5g0081211 Rosa chinensis HOM05D001729 ORTHO05D001155 1.7e-20 103.6 141 42.6
FAN14G1791 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.8e-20 102.4 157 42.0
Prupe.3G059500 Prunus persica HOM05D001729 ORTHO05D001155 2.5e-19 99.8 200 35.0
Prupe.1G509300 Prunus persica HOM05D001729 ORTHO05D001155 3.2e-19 99.4 263 31.9
FAN03G3155 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.2e-19 99.0 246 31.7
FAN01G0708 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.5e-19 98.6 254 30.7
RcHm_v2.0_Chr5g0081171 Rosa chinensis HOM05D001729 ORTHO05D001155 5.5e-19 98.6 146 41.1
RcHm_v2.0_Chr6g0275871 Rosa chinensis HOM05D001729 ORTHO05D001155 3.6e-18 95.9 154 38.3
FvH4_3g44471 Fragaria vesca HOM05D001729 ORTHO05D001155 4.7e-18 95.5 177 36.7
FvH4_6g46240 Fragaria vesca HOM05D001729 ORTHO05D001155 8.0e-18 94.7 257 30.7
FAN16G0249 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.0e-18 94.7 177 36.7
RcHm_v2.0_Chr2g0123691 Rosa chinensis HOM05D001729 ORTHO05D001155 6.7e-17 91.7 233 29.6
RcHm_v2.0_Chr6g0276071 Rosa chinensis HOM05D001729 ORTHO05D001155 1.2e-16 90.9 153 35.9
RcHm_v2.0_Chr7g0221261 Rosa chinensis HOM05D001729 ORTHO05D001155 4.4e-16 89.0 255 29.0
FAN01G0742 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.5e-16 88.2 143 37.1
MD09G1201600 Malus domestica HOM05D001729 ORTHO05D001155 7.5e-16 88.2 159 37.7
FAN06G3932 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.7e-16 87.8 143 36.4
FAN18G1542 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.7e-16 87.8 261 30.3
FAN18G4057 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.7e-16 87.8 261 30.3
FAN08G1373 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-15 87.4 261 29.9
FvH4_3g35490 Fragaria vesca HOM05D001729 ORTHO05D001155 1.7e-15 87.0 137 39.4
FvH4_7g12841 Fragaria vesca HOM05D001729 ORTHO05D001155 1.7e-15 87.0 143 36.4
FAN11G0139 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.7e-15 87.0 137 39.4
Prupe.4G053600 Prunus persica HOM05D001729 ORTHO05D001155 2.8e-15 86.3 144 43.1
FvH4_6g46241 Fragaria vesca HOM05D001729 ORTHO05D001155 3.7e-15 85.9 156 35.9
FvH4_6g46280 Fragaria vesca HOM05D001729 ORTHO05D001155 4.8e-15 85.5 184 33.7
RcHm_v2.0_Chr2g0164721 Rosa chinensis HOM05D001729 ORTHO05D001155 4.8e-15 85.5 271 28.4
Prupe.8G110700 Prunus persica HOM05D001729 ORTHO05D001155 1.1e-14 84.3 142 37.3
FAN05G4264 Fragaria x ananassa HOM05D001526 ORTHO05D001417 1.4e-14 84.0 156 35.3
FAN11G1727 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-14 84.0 153 37.3
FAN11G2672 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-14 84.0 157 37.6
FAN14G0370 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-14 83.6 156 35.3
MD02G1008700 Malus domestica HOM05D001729 ORTHO05D001155 1.8e-14 83.6 149 36.2
FvH4_6g46242 Fragaria vesca HOM05D001729 ORTHO05D001155 2.4e-14 83.2 154 35.1
MD02G1008900 Malus domestica HOM05D001729 ORTHO05D001155 2.4e-14 83.2 149 36.2
RcHm_v2.0_Chr2g0163051 Rosa chinensis HOM05D001729 ORTHO05D001155 2.4e-14 83.2 190 30.5
FvH4_3g44510 Fragaria vesca HOM05D001729 ORTHO05D001155 3.1e-14 82.8 159 36.5
FAN06G0177 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.1e-14 82.8 143 35.0
FAN16G2506 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.1e-14 82.4 159 36.5
RcHm_v2.0_Chr5g0021011 Rosa chinensis HOM05D001729 ORTHO05D001155 7.0e-14 81.6 182 32.4
FvH4_6g31981 Fragaria vesca HOM05D001729 ORTHO05D001155 9.1e-14 81.3 150 33.3
FvH4_3g30171 Fragaria vesca HOM05D001729 ORTHO05D001155 3.5e-13 79.3 157 37.6
FvH4_4g18120 Fragaria vesca HOM05D001729 ORTHO05D001155 3.5e-13 79.3 141 34.8
FvH4_6g45890 Fragaria vesca HOM05D001729 ORTHO05D001155 4.5e-13 79.0 243 28.8
FAN02G3094 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.9e-13 78.6 243 29.2
FAN05G0208 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.9e-13 78.6 141 34.0
FAN02G3911 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.7e-13 78.2 152 32.2
MD10G1000600 Malus domestica HOM05D001729 ORTHO05D001155 7.7e-13 78.2 147 36.7
Prupe.5G070600 Prunus persica HOM05D001729 ORTHO05D001155 7.7e-13 78.2 128 39.1
FvH4_2g30622 Fragaria vesca HOM05D001729 ORTHO05D001155 1.0e-12 77.8 129 37.2
FAN07G1354 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.0e-12 77.8 141 34.0
FAN24G2684 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.0e-12 77.8 129 37.2
RcHm_v2.0_Chr6g0285591 Rosa chinensis HOM05D001729 ORTHO05D001155 1.0e-12 77.8 149 34.2
Prupe.3G059600 Prunus persica HOM05D001729 ORTHO05D001155 1.3e-12 77.4 143 37.8
FAN12G2308 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.2e-12 76.6 141 34.0
Prupe.5G068800 Prunus persica HOM05D001729 ORTHO05D001155 2.2e-12 76.6 128 38.3
RcHm_v2.0_Chr2g0151111 Rosa chinensis HOM05D001729 ORTHO05D001155 2.2e-12 76.6 141 35.5
FvH4_6g46260 Fragaria vesca HOM05D001729 ORTHO05D001155 3.8e-12 75.9 151 34.4
FvH4_6g39371 Fragaria vesca HOM05D001729 ORTHO05D001155 5.0e-12 75.5 140 35.0
FAN09G2757 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.0e-12 75.5 140 35.0
FAN14G1727 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.0e-12 75.5 140 35.0
FAN14G3193 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.0e-12 75.5 243 28.4
FAN02G0048 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.5e-12 75.1 133 37.6
FvH4_2g19920 Fragaria vesca HOM05D001729 ORTHO05D001155 8.5e-12 74.7 149 32.9
FvH4_4g16921 Fragaria vesca HOM05D001729 ORTHO05D001155 8.5e-12 74.7 141 33.3
FAN05G2911 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.5e-12 74.7 243 28.8
FAN07G0163 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.5e-12 74.7 141 33.3
FAN15G1054 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.5e-12 74.7 149 32.9
FAN24G2147 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.5e-12 74.7 149 32.9
FAN27G2714 Fragaria x ananassa HOM05D001115 ORTHO05D001023 1.1e-11 74.3 171 31.6
FvH4_4g17121 Fragaria vesca HOM05D001729 ORTHO05D001155 1.5e-11 73.9 145 35.9
FAN12G2569 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.5e-11 73.9 145 35.9
RcHm_v2.0_Chr3g0450211 Rosa chinensis HOM05D001729 ORTHO05D001155 1.5e-11 73.9 145 32.4
FAN11G3238 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.9e-11 73.6 152 34.2
FAN12G2239 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.9e-11 73.6 141 33.3
FAN14G3807 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.9e-11 73.6 129 37.2
FAN05G2640 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.5e-11 73.2 129 37.2
FAN05G5187 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.5e-11 73.2 129 37.2
FAN14G0866 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.5e-11 73.2 133 36.1
FAN14G5781 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.5e-11 73.2 129 38.0
Prupe.1G510700 Prunus persica HOM05D001729 ORTHO05D001155 4.2e-11 72.4 194 33.0
Prupe.3G265100 Prunus persica HOM05D001729 ORTHO05D001155 4.2e-11 72.4 143 36.4
FvH4_6g02041 Fragaria vesca HOM05D001729 ORTHO05D001155 5.5e-11 72.0 167 34.1
FAN03G1977 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.2e-11 71.6 141 35.5
FAN20G1095 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.2e-11 71.6 162 33.3
FvH4_3g43730 Fragaria vesca HOM05D001729 ORTHO05D001155 1.2e-10 70.9 132 34.8
FAN25G0505 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-10 70.9 103 38.8
Prupe.1G512600 Prunus persica HOM05D001729 ORTHO05D001155 1.2e-10 70.9 146 36.3
RcHm_v2.0_Chr3g0449911 Rosa chinensis HOM05D001729 ORTHO05D001155 1.2e-10 70.9 131 35.1
RcHm_v2.0_Chr2g0089331 Rosa chinensis HOM05D001729 ORTHO05D001155 1.6e-10 70.5 259 28.6
FAN15G2506 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.1e-10 68.6 134 32.8
FAN24G2446 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.1e-10 68.6 138 32.6
FAN21G0302 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.0e-10 68.2 112 37.5
FvH4_3g43682 Fragaria vesca HOM05D001729 ORTHO05D001155 1.4e-09 67.4 110 36.4
FAN02G2194 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-09 67.0 129 36.4
MD14G1026900 Malus domestica HOM05D001729 ORTHO05D001155 3.0e-09 66.2 135 34.1
Prupe.6G075400 Prunus persica HOM05D001729 ORTHO05D001155 3.0e-09 66.2 143 39.2
FAN19G1216 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.2e-09 65.5 142 26.8
FvH4_1g02011 Fragaria vesca HOM05D001729 ORTHO05D001155 8.8e-09 64.7 237 27.8
MD15G1018100 Malus domestica HOM05D001729 ORTHO05D001155 8.8e-09 64.7 112 40.2
FvH4_4g31310 Fragaria vesca HOM05D001729 ORTHO05D001155 1.2e-08 64.3 147 31.3
Prupe.6G075500 Prunus persica HOM05D001729 ORTHO05D001155 2.0e-08 63.5 137 36.5
FAN19G0745 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.7e-08 62.0 104 36.5
MD03G1256400 Malus domestica HOM05D001729 ORTHO05D001155 5.7e-08 62.0 137 38.7
FAN09G3613 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.5e-08 61.6 143 32.2
FvH4_3g43770 Fragaria vesca HOM05D001729 ORTHO05D001155 9.8e-08 61.2 115 35.7
FAN09G4277 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.8e-08 61.2 61 52.5
FAN26G2860 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.8e-08 61.2 100 33.0
FAN02G3994 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-07 60.8 121 33.1
MD05G1244200 Malus domestica HOM05D001729 ORTHO05D001155 1.3e-07 60.8 143 30.1
FAN19G1733 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.2e-07 60.1 142 24.6
FvH4_4g17782 Fragaria vesca HOM05D001729 ORTHO05D001155 2.8e-07 59.7 59 44.1
FAN08G2539 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.8e-07 59.7 144 30.6
FAN14G3624 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.8e-07 59.7 242 26.9
FAN25G0589 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.8e-07 59.7 171 30.4
FAN16G0429 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.7e-07 59.3 196 30.6
FAN02G1588 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.8e-07 58.9 115 34.8
FvH4_3g44582 Fragaria vesca HOM05D001729 ORTHO05D001155 6.3e-07 58.5 113 31.9
FvH4_6g45291 Fragaria vesca HOM05D001729 ORTHO05D001155 8.3e-07 58.2 148 30.4
FAN05G0656 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.3e-07 58.2 188 30.9
FAN05G5452 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.3e-07 58.2 253 26.9
FAN14G0421 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.3e-07 58.2 148 30.4
FAN20G0258 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.3e-07 58.2 105 34.3
FvH4_6g03380 Fragaria vesca HOM05D001729 ORTHO05D001155 1.1e-06 57.8 242 26.4
FAN14G1187 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-06 57.4 135 34.1
FAN14G2874 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-06 57.4 135 34.1
FAN26G1025 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-06 57.0 114 35.1
FAN02G3887 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.1e-06 56.2 136 29.4
FvH4_6g01541 Fragaria vesca HOM05D001729 ORTHO05D001155 5.4e-06 55.5 134 32.1
FAN23G1584 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.1e-06 54.7 114 35.1


User provided reference genes

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