Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G2140 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.1e-243 846.3 441 100.0
FAN03G0347 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.0e-233 813.1 441 97.5
FAN01G0010 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.0e-128 463.4 355 73.8
FAN06G3184 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.0e-113 414.5 228 99.6
FAN05G2544 Fragaria x ananassa HOM05D008847 ORTHO05D016304 6.6e-100 368.6 492 49.4
FvH4_7g25361 Fragaria vesca HOM05D008847 ORTHO05D000368 3.6e-98 362.8 497 49.7
FvH4_6g44020 Fragaria vesca HOM05D008847 ORTHO05D000368 7.6e-96 355.1 492 47.8
FAN06G2118 Fragaria x ananassa HOM05D008847 ORTHO05D016304 3.3e-91 339.7 470 49.1
FvH4_6g44041 Fragaria vesca HOM05D008847 ORTHO05D000368 1.1e-70 271.6 350 50.0
RcHm_v2.0_Chr3g0476161 Rosa chinensis HOM05D000576 ORTHO05D000368 1.3e-52 211.5 447 38.9
FAN06G5009 Fragaria x ananassa HOM05D000576 ORTHO05D000368 9.7e-51 205.3 419 39.4
RcHm_v2.0_Chr2g0167641 Rosa chinensis HOM05D000576 ORTHO05D000368 2.4e-49 200.7 416 38.9
FvH4_7g27481 Fragaria vesca HOM05D008847 ORTHO05D000368 5.9e-48 196.1 399 38.6
RcHm_v2.0_Chr2g0167551 Rosa chinensis HOM05D000576 ORTHO05D000368 2.2e-47 194.1 438 35.2
FvH4_6g47821 Fragaria vesca HOM05D000576 ORTHO05D000368 4.2e-46 189.9 440 36.4
FAN06G0982 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.1e-45 187.6 421 38.2
FAN06G2289 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.7e-45 187.2 421 38.2
FAN10G0882 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.7e-45 187.2 419 38.4
FAN06G1177 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.4e-44 184.9 450 35.8
RcHm_v2.0_Chr5g0008761 Rosa chinensis HOM05D008847 ORTHO05D045484 6.7e-44 182.6 481 34.3
RcHm_v2.0_Chr2g0168251 Rosa chinensis HOM05D000576 ORTHO05D000368 1.1e-43 181.8 436 34.2
FAN14G0812 Fragaria x ananassa HOM05D000576 ORTHO05D000368 9.7e-43 178.7 458 34.3
FAN14G3739 Fragaria x ananassa HOM05D000576 ORTHO05D000368 6.3e-42 176.0 440 35.0
Prupe.3G259800 Prunus persica HOM05D000576 ORTHO05D000368 1.4e-41 174.9 517 33.7
FAN01G0602 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.0e-40 171.0 267 45.3
FAN14G2376 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.2e-39 167.5 407 35.9
RcHm_v2.0_Chr2g0166621 Rosa chinensis HOM05D000576 ORTHO05D000368 5.0e-39 166.4 443 33.9
RcHm_v2.0_Chr5g0047501 Rosa chinensis HOM05D008847 ORTHO05D000368 1.9e-38 164.5 354 37.9
FAN05G2407 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.6e-37 161.4 438 33.3
FAN09G3608 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.3e-36 157.5 395 34.4
FAN03G1143 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.1e-35 155.2 332 38.9
FAN01G0028 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.7e-34 151.4 205 50.2
FAN05G3797 Fragaria x ananassa HOM05D000576 ORTHO05D000368 8.2e-34 149.1 382 35.1
FAN10G0027 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.7e-31 141.4 126 62.7
CSS0031751 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 2.2e-31 141.0 443 30.7
FAN09G2824 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.2e-31 141.0 353 36.0
FvH4_6g48151 Fragaria vesca HOM05D000576 ORTHO05D000368 2.9e-31 140.6 340 34.4
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 7.2e-30 136.0 292 37.7
Sabra17G0081300 Salix brachista HOM05D000576 ORTHO05D000368 3.6e-29 133.7 425 31.8
RcHm_v2.0_Chr2g0167601 Rosa chinensis HOM05D000576 ORTHO05D000368 2.4e-25 120.9 251 38.2
FAN01G2751 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.1e-25 120.6 274 40.5
FAN05G4147 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.1e-25 120.6 307 32.9
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.2e-24 118.6 288 35.8
MD09G1063900 Malus domestica HOM05D000576 ORTHO05D000368 2.7e-24 117.5 277 35.7
FAN05G3417 Fragaria x ananassa HOM05D008847 ORTHO05D000368 7.7e-24 115.9 263 37.6
TPR.G4771 Trifolium pratense HOM05D009500 ORTHO05D000368 7.7e-24 115.9 392 26.5
Potri.017G092301 Populus trichocarpa HOM05D008175 ORTHO05D000368 1.7e-23 114.8 412 30.3
TPR.G9274 Trifolium pratense HOM05D009500 ORTHO05D000368 2.2e-23 114.4 403 28.5
TAR633G2125 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.9e-23 114.0 433 27.3
RcHm_v2.0_Chr3g0476181 Rosa chinensis HOM05D000576 ORTHO05D000368 1.1e-22 112.1 230 39.6
FAN02G4373 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.5e-22 111.7 411 29.2
FAN10G2125 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.9e-22 111.3 184 44.6
TPR.G6938 Trifolium pratense HOM05D009500 ORTHO05D000368 1.9e-22 111.3 411 26.3
FAN14G2737 Fragaria x ananassa HOM05D000385 ORTHO05D000269 2.5e-22 110.9 245 36.7
TAR633G1895 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.5e-22 110.9 433 28.2
TPR.G6942 Trifolium pratense HOM05D009500 ORTHO05D000368 3.2e-22 110.5 403 28.8
FAN09G4808 Fragaria x ananassa HOM05D008847 ORTHO05D000368 9.4e-22 109.0 251 34.7
TPR.G7001 Trifolium pratense HOM05D009500 ORTHO05D000368 1.2e-21 108.6 405 27.7
FvH4_6g50840 Fragaria vesca HOM05D000576 ORTHO05D000368 1.4e-20 105.1 255 34.9
Dinv11451 Davidia involucrata HOM05D000576 ORTHO05D000368 2.3e-20 104.4 411 28.2
FAN03G0578 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.5e-19 101.7 236 38.1
FvH4_6g48431 Fragaria vesca HOM05D008847 ORTHO05D000368 2.2e-18 97.8 435 26.9
Ciclev10013373m.g Citrus clementina HOM05D000576 ORTHO05D000368 3.7e-18 97.1 470 26.0
Medtr7g116580 Medicago truncatula HOM05D009500 ORTHO05D000368 4.8e-18 96.7 372 27.2
TPR.G4800 Trifolium pratense HOM05D009500 ORTHO05D000368 8.3e-18 95.9 391 26.1
TAR633G2603 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.4e-17 94.4 400 28.0
Medtr7g114090 Medicago truncatula HOM05D009500 ORTHO05D000368 5.4e-17 93.2 365 28.8
TPR.G4783 Trifolium pratense HOM05D009500 ORTHO05D000368 9.1e-17 92.4 423 27.9
TAR365G0708 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.2e-16 92.0 419 28.2
Dinv22828 Davidia involucrata HOM05D000576 ORTHO05D000368 5.9e-16 89.7 421 27.6
TAR629G2683 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.3e-15 88.6 397 27.5
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.7e-15 88.2 246 34.6
FAN11G3585 Fragaria x ananassa HOM05D000477 ORTHO05D000338 2.2e-15 87.8 142 39.4
TAR496G0003 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.9e-15 87.4 290 31.0
TPR.G4702 Trifolium pratense HOM05D009500 ORTHO05D000368 3.8e-15 87.0 369 26.3
TPR.G4705 Trifolium pratense HOM05D008175 ORTHO05D000368 3.8e-15 87.0 354 27.7
MBI06_g04290_MAGBIO Magnolia biondii HOM05D000576 ORTHO05D000368 6.5e-15 86.3 356 28.1
FAN14G4050 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.1e-14 85.5 298 30.5
FAN14G4345 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.1e-14 85.5 165 38.2
CSS0035647 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 1.5e-14 85.1 470 28.3
Prupe.3G259300 Prunus persica HOM05D008847 ORTHO05D000368 3.2e-14 84.0 251 33.9
FvH4_6g48330 Fragaria vesca HOM05D008847 ORTHO05D000368 5.5e-14 83.2 160 38.1
Dinv22832 Davidia involucrata HOM05D000576 ORTHO05D000368 1.6e-13 81.6 417 26.4
TAR633G1517 Trochodendron aralioides HOM05D000576 ORTHO05D000368 4.7e-13 80.1 355 27.9
TAR636G3326 Trochodendron aralioides HOM05D000576 ORTHO05D000368 8.0e-13 79.3 436 23.9
Prupe.7G249000 Prunus persica HOM05D000576 ORTHO05D000368 1.0e-12 79.0 245 32.2
TAR629G0101 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.8e-12 78.2 332 27.7
Aqoxy5G02891 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 8.8e-12 75.9 368 28.0
FAN25G2043 Fragaria x ananassa HOM05D000477 ORTHO05D000338 1.2e-11 75.5 69 60.9
Medtr7g116250 Medicago truncatula HOM05D008175 ORTHO05D000368 1.2e-11 75.5 233 32.6
Aqoxy1G01400 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 1.5e-11 75.1 431 25.3
MBI02_g05998_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D000368 1.5e-11 75.1 439 26.9
CSS0001211 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 2.0e-11 74.7 381 26.0
FAN02G1311 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.4e-11 73.9 130 38.5
Actinidia31191 Actinidia chinensis HOM05D000576 ORTHO05D000368 5.7e-11 73.2 431 26.5
Medtr1g111630 Medicago truncatula HOM05D009500 ORTHO05D000368 9.8e-11 72.4 294 25.5
TAR371G0526 Trochodendron aralioides HOM05D000576 ORTHO05D000368 9.8e-11 72.4 425 24.2
MBI02_g05996_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D008290 1.7e-10 71.6 437 24.5
FAN14G2415 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.7e-10 70.5 335 25.7
Rhsim02G0214100 Rhododendron simsii HOM05D000576 ORTHO05D000368 3.7e-10 70.5 414 25.1
RcHm_v2.0_Chr2g0167561 Rosa chinensis HOM05D000576 ORTHO05D000368 6.3e-10 69.7 190 33.2
CiPaw.10G088400 Carya illinoinensis HOM05D000576 ORTHO05D000368 8.3e-10 69.3 412 25.0
FvH4_3g09170 Fragaria vesca HOM05D008847 ORTHO05D016304 8.3e-10 69.3 130 40.0
COL.COLO4_23025 Corchorus olitorius HOM05D000576 ORTHO05D000368 2.4e-09 67.8 361 24.7
Haze_05695 Corylus avellana HOM05D000576 ORTHO05D000368 2.4e-09 67.8 391 26.3
MBI02_g05995_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D000368 2.4e-09 67.8 283 27.6
Psat3g047200 Pisum sativum HOM05D008175 ORTHO05D010403 2.4e-09 67.8 320 25.0
TPR.G20555 Trifolium pratense HOM05D008175 ORTHO05D010403 3.1e-09 67.4 222 29.7
CSS0016406 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 4.1e-09 67.0 378 25.7
Gorai.004G240100 Gossypium raimondii HOM05D000576 ORTHO05D000368 4.1e-09 67.0 372 21.5
MD02G1023100 Malus domestica HOM05D000576 ORTHO05D000368 4.1e-09 67.0 244 32.8
Aqoxy4G01629 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 7.0e-09 66.2 230 27.4
Actinidia20536 Actinidia chinensis HOM05D000576 ORTHO05D000368 9.2e-09 65.9 408 26.0
QL08p044485 Quercus lobata HOM05D041869 ORTHO05D010403 9.2e-09 65.9 189 31.2
COL.COLO4_23029 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.2e-08 65.5 363 23.7
TPR.G24323 Trifolium pratense HOM05D008175 ORTHO05D010403 1.2e-08 65.5 191 27.2
QL04p071108 Quercus lobata HOM05D000576 ORTHO05D000368 1.6e-08 65.1 359 23.4
RcHm_v2.0_Chr2g0087591 Rosa chinensis HOM05D000576 ORTHO05D000368 2.7e-08 64.3 258 28.7
Medtr8g468470 Medicago truncatula HOM05D000576 ORTHO05D000368 3.5e-08 63.9 410 26.1
Hund23632 Selenicereus undatus HOM05D000312 ORTHO05D008290 4.5e-08 63.5 441 24.9
Aqoxy4G01472 Aquilegia oxysepala HOM05D000312 ORTHO05D000368 5.9e-08 63.2 281 27.8
MBI16_g01187_MAGBIO Magnolia biondii HOM05D000576 ORTHO05D000368 7.7e-08 62.8 282 26.6
Peaxi162Scf00124g01738 Petunia axillaris HOM05D000312 ORTHO05D000221 7.7e-08 62.8 289 27.3
Potri.016G106600 Populus trichocarpa HOM05D016710 ORTHO05D015329 7.7e-08 62.8 293 28.7
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 1.3e-07 62.0 378 23.0
FAN14G5125 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.3e-07 62.0 119 43.7
Lj5A369G34 Lonicera japonica HOM05D000576 ORTHO05D000368 1.7e-07 61.6 363 25.1
MBI18_g07596_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D008290 1.7e-07 61.6 262 28.6
Sabra11G0029500 Salix brachista HOM05D007484 ORTHO05D008290 1.7e-07 61.6 379 24.3
MELO3C027278.2 Cucumis melo HOM05D001396 ORTHO05D000493 2.3e-07 61.2 317 23.0
Prupe.7G131300 Prunus persica HOM05D000576 ORTHO05D000368 2.3e-07 61.2 149 33.6
Ciclev10020079m.g Citrus clementina HOM05D000576 ORTHO05D000368 2.9e-07 60.8 360 22.2
Nitab4.5_0007853g0060 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.8e-07 60.5 319 23.8
TAR362G1194 Trochodendron aralioides HOM05D000576 ORTHO05D003312 3.8e-07 60.5 208 27.4
FAN15G1135 Fragaria x ananassa HOM05D008847 ORTHO05D000368 6.6e-07 59.7 75 45.3
CSS0047483 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D008290 8.6e-07 59.3 457 23.0
RcHm_v2.0_Chr3g0480841 Rosa chinensis HOM05D000576 ORTHO05D000368 8.6e-07 59.3 446 23.8
TAR365G0551 Trochodendron aralioides HOM05D000576 ORTHO05D000368 8.6e-07 59.3 202 30.2
Hma1.2p1_0189F.1_g082790 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 1.1e-06 58.9 322 26.4
Nitab4.5_0001438g0180 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.1e-06 58.9 324 23.8
RcHm_v2.0_Chr2g0167681 Rosa chinensis HOM05D008847 ORTHO05D000368 1.1e-06 58.9 104 40.4
Phvul.003G068100 Phaseolus vulgaris HOM05D000576 ORTHO05D000368 1.9e-06 58.2 383 25.8
Lsat_1_v5_gn_7_24881 Lactuca sativa HOM05D001396 ORTHO05D000493 2.5e-06 57.8 208 29.8
DCAR_026939 Daucus carota HOM05D000576 ORTHO05D000368 3.3e-06 57.4 348 25.3
Lj4g0012458 Lotus japonicus HOM05D000576 ORTHO05D000368 3.3e-06 57.4 375 24.5
MBI18_g07602_MAGBIO Magnolia biondii HOM05D000576 ORTHO05D008290 3.3e-06 57.4 281 25.6
Psat7g057400 Pisum sativum HOM05D008175 ORTHO05D010403 3.3e-06 57.4 196 27.0
MD05G1157700 Malus domestica HOM05D000312 ORTHO05D000221 4.3e-06 57.0 330 25.8
Nitab4.5_0005124g0040 Nicotiana tabacum HOM05D000312 ORTHO05D000221 4.3e-06 57.0 341 23.5
RcHm_v2.0_Chr3g0449531 Rosa chinensis HOM05D000576 ORTHO05D000368 4.3e-06 57.0 368 21.2
TPR.G33251 Trifolium pratense HOM05D000576 ORTHO05D000368 4.3e-06 57.0 408 25.7
TPR.G3860 Trifolium pratense HOM05D008175 ORTHO05D010403 4.3e-06 57.0 230 26.1
FvH4_6g48814 Fragaria vesca HOM05D001255 ORTHO05D025495 5.6e-06 56.6 76 47.4
CSS0035521 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 7.3e-06 56.2 349 25.5
Medtr5g090500 Medicago truncatula HOM05D009500 ORTHO05D000368 7.3e-06 56.2 191 27.7
Sopen11g006340 Solanum pennellii HOM05D000312 ORTHO05D000221 7.3e-06 56.2 318 23.0


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