Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.8e-114 416.0 219 100.0
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 5.2e-114 414.5 219 99.5
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.5e-113 412.9 219 99.1
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 4.4e-113 411.4 219 99.1
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 7.5e-113 410.6 219 99.1
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 1.2e-110 403.3 227 95.2
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 6.4e-104 380.9 219 93.2
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 5.4e-87 324.7 233 74.7
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 2.7e-86 322.4 223 76.2
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 1.7e-85 319.7 227 76.7
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 2.3e-85 319.3 225 75.6
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 3.0e-85 318.9 223 75.3
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 3.0e-85 318.9 223 75.3
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 1.1e-82 310.5 220 72.7
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 1.2e-81 307.0 226 72.6
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 1.5e-81 306.6 221 72.9
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 1.5e-81 306.6 225 72.0
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 2.0e-81 306.2 194 78.9
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 2.0e-81 306.2 172 93.6
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 2.6e-81 305.8 226 73.0
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 2.6e-81 305.8 194 78.4
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 2.6e-81 305.8 221 75.1
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 5.8e-81 304.7 220 73.2
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 5.8e-81 304.7 223 72.6
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 9.9e-81 303.9 230 70.4
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 1.7e-80 303.1 222 71.6
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 1.1e-79 300.4 202 76.7
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 2.4e-79 299.3 203 76.4
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 5.4e-79 298.1 214 72.0
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 5.4e-79 298.1 233 69.1
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 5.4e-79 298.1 208 72.6
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 7.1e-79 297.7 207 73.4
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 7.1e-79 297.7 223 67.7
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 7.1e-79 297.7 222 71.6
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 1.2e-78 297.0 188 81.4
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 1.2e-78 297.0 215 70.2
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 1.6e-78 296.6 208 72.1
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 2.1e-78 296.2 222 72.1
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 2.7e-78 295.8 202 76.2
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 2.7e-78 295.8 223 70.0
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 6.0e-78 294.7 216 73.6
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 6.0e-78 294.7 202 76.7
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 7.9e-78 294.3 208 71.6
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 7.9e-78 294.3 224 71.4
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 1.7e-77 293.1 200 73.5
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 1.7e-77 293.1 202 74.3
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 1.7e-77 293.1 202 74.3
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 3.0e-77 292.4 225 70.7
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 3.9e-77 292.0 237 66.7
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 5.1e-77 291.6 217 71.9
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 8.7e-77 290.8 233 68.7
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 3.3e-76 288.9 199 74.4
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 1.3e-75 287.0 180 82.2
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 4.8e-75 285.0 220 71.4
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 1.1e-74 283.9 221 69.7
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 5.3e-74 281.6 230 66.5
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 1.2e-73 280.4 226 68.6
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 2.6e-73 279.3 219 67.1
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 3.4e-73 278.9 188 77.7
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 2.9e-72 275.8 205 70.7
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 3.8e-72 275.4 215 67.0
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 1.1e-71 273.9 223 67.7
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 2.4e-71 272.7 211 65.4
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 3.2e-71 272.3 206 69.9
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 5.5e-71 271.6 211 65.9
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 7.1e-71 271.2 220 66.8
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 2.7e-70 269.2 221 64.3
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 1.3e-69 266.9 217 65.0
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 1.8e-69 266.5 178 76.4
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 6.7e-69 264.6 206 67.5
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 8.7e-69 264.2 214 66.4
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 1.5e-68 263.5 220 62.3
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 1.6e-67 260.0 185 68.1
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 2.1e-67 259.6 206 63.1
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 1.8e-66 256.5 199 66.8
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 1.8e-66 256.5 217 63.1
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 3.1e-66 255.8 199 66.8
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 6.9e-66 254.6 181 71.8
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 4.5e-65 251.9 202 63.9
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 4.5e-65 251.9 202 64.9
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 6.5e-64 248.1 219 62.1
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 3.2e-63 245.7 219 62.6
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 4.2e-63 245.4 186 69.4
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 4.2e-63 245.4 186 69.4
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 4.2e-63 245.4 198 69.2
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 1.6e-62 243.4 169 72.2
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 4.6e-62 241.9 157 77.1
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 7.9e-62 241.1 223 60.5
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 7.9e-62 241.1 175 69.7
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 1.0e-61 240.7 211 62.1
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 3.0e-61 239.2 177 67.8
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 3.9e-61 238.8 230 60.0
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 3.9e-61 238.8 230 60.0
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 6.7e-61 238.0 176 66.5
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 8.7e-61 237.7 174 69.5
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 3.3e-60 235.7 197 64.0
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 4.3e-60 235.3 213 60.1
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 4.3e-60 235.3 213 60.1
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 4.3e-60 235.3 213 60.1
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 1.6e-59 233.4 216 59.3
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 1.6e-59 233.4 216 59.3
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 6.3e-59 231.5 219 60.3
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 8.2e-59 231.1 157 75.2
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 1.1e-58 230.7 182 66.5
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.4e-58 230.3 156 74.4
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 1.4e-58 230.3 156 74.4
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 2.4e-58 229.6 156 73.7
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 9.0e-58 227.6 202 63.4
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 2.0e-57 226.5 157 72.6
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 2.6e-57 226.1 171 65.5
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 5.5e-55 218.4 157 72.0
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 1.6e-54 216.9 157 69.4
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 1.6e-54 216.9 156 73.7
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 1.0e-53 214.2 157 72.0
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 1.8e-53 213.4 190 54.2
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 1.1e-52 210.7 157 68.8
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 1.5e-52 210.3 180 60.6
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 1.5e-52 210.3 137 78.1
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 2.5e-52 209.5 157 70.1
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 2.5e-52 209.5 155 64.5
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 7.4e-52 208.0 157 70.7
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 2.2e-51 206.5 157 69.4
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 2.8e-51 206.1 155 65.2
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 1.8e-50 203.4 193 57.5
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 3.1e-50 202.6 147 69.4
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 1.2e-49 200.7 144 69.4
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 1.5e-49 200.3 172 62.8
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 1.0e-48 197.6 144 75.0
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 1.0e-48 197.6 136 72.8
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 1.3e-48 197.2 181 57.5
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 1.7e-48 196.8 185 60.5
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 1.7e-48 196.8 185 60.5
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 8.5e-48 194.5 125 79.2
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.1e-47 194.1 118 84.7
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 1.1e-47 194.1 204 51.0
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 5.1e-45 185.3 194 51.5
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 2.0e-41 173.3 183 51.9
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 1.9e-39 166.8 137 59.9
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 3.6e-38 162.5 105 77.1
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.0e-37 161.0 105 76.2
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 1.4e-37 160.6 224 46.9
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 1.5e-36 157.1 224 45.5
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 1.3e-35 154.1 214 46.7
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 2.4e-34 149.8 157 49.0
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 7.0e-34 148.3 108 71.3
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 2.9e-24 116.3 87 66.7
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 6.1e-22 108.6 157 45.2
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 5.2e-21 105.5 204 34.3
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.6e-12 76.6 103 46.6
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.6e-12 76.6 103 46.6
CSS0007759 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 3.7e-11 72.8 80 51.2


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