Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G2032 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.0e-245 850.1 413 100.0
FAN06G0677 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.0e-231 805.4 411 95.6
FAN06G0811 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.2e-225 786.2 399 96.0
FAN01G2879 Fragaria x ananassa HOM05D000202 ORTHO05D010132 3.6e-225 784.6 403 94.5
FvH4_7g13450 Fragaria vesca HOM05D007222 ORTHO05D010132 3.6e-217 758.1 411 90.5
FAN03G1025 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.8e-198 694.9 417 82.0
FAN03G0896 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.2e-197 691.4 379 90.0
FvH4_7g27710 Fragaria vesca HOM05D007222 ORTHO05D010132 3.5e-196 688.3 413 82.8
FvH4_7g27660 Fragaria vesca HOM05D007222 ORTHO05D010132 2.3e-195 685.6 413 82.1
FAN06G5048 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.1e-179 631.3 411 76.9
FvH4_7g27670 Fragaria vesca HOM05D007222 ORTHO05D010132 1.3e-169 600.1 417 72.9
FAN06G1439 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.6e-169 599.7 417 72.9
FAN06G2815 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.8e-168 596.3 417 72.7
FAN10G3229 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.3e-168 594.7 412 72.6
FvH4_7g27720 Fragaria vesca HOM05D007222 ORTHO05D010132 1.0e-163 580.5 407 73.5
FAN06G4891 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.4e-120 437.2 277 78.7
FAN06G2272 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.9e-117 426.8 381 60.6
FAN10G0676 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.9e-117 426.8 385 60.0
FvH4_7g27631 Fragaria vesca HOM05D007222 ORTHO05D010132 9.5e-117 424.5 385 60.0
FAN06G2615 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.2e-114 417.5 374 60.4
FAN10G3128 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.2e-88 329.7 387 51.2
FAN01G0578 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.4e-82 309.7 363 51.2
FvH4_7g27640 Fragaria vesca HOM05D007222 ORTHO05D010132 3.9e-78 296.2 177 83.6
RcHm_v2.0_Chr1g0379111 Rosa chinensis HOM05D007222 ORTHO05D010132 8.4e-73 278.5 432 41.7
FAN03G0246 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.0e-70 271.6 222 61.3
FAN06G1181 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.2e-65 253.8 254 55.5
RcHm_v2.0_Chr1g0379231 Rosa chinensis HOM05D007222 ORTHO05D010132 4.9e-65 252.7 395 41.5
RcHm_v2.0_Chr1g0379381 Rosa chinensis HOM05D007222 ORTHO05D010132 4.9e-65 252.7 395 41.5
RcHm_v2.0_Chr1g0378721 Rosa chinensis HOM05D007222 ORTHO05D010132 1.1e-64 251.5 395 41.5
RcHm_v2.0_Chr1g0379031 Rosa chinensis HOM05D007222 ORTHO05D010132 7.1e-64 248.8 374 42.2
FAN03G0079 Fragaria x ananassa HOM05D001548 ORTHO05D003901 2.5e-53 213.8 373 38.1
FAN06G3913 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.6e-52 211.1 359 42.1
FAN06G5098 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.2e-50 204.9 114 86.8
MD17G1269500 Malus domestica HOM05D007222 ORTHO05D036617 1.2e-47 194.9 397 36.8
Prupe.5G179400 Prunus persica HOM05D007222 ORTHO05D010132 2.1e-47 194.1 367 38.1
FAN01G2703 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.9e-46 189.9 150 65.3
FAN10G0066 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.9e-46 189.9 117 81.2
RcHm_v2.0_Chr7g0205711 Rosa chinensis HOM05D007222 ORTHO05D020701 3.9e-46 189.9 356 38.5
Prupe.5G196700 Prunus persica HOM05D007222 ORTHO05D010132 5.1e-46 189.5 391 37.6
Prupe.5G196500 Prunus persica HOM05D007222 ORTHO05D010132 1.1e-43 181.8 388 35.8
FAN03G1782 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.4e-42 176.8 344 35.5
FAN06G2198 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.7e-42 175.6 252 42.5
FAN06G1334 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.0e-41 175.3 173 57.8
MD06G1179400 Malus domestica HOM05D007222 ORTHO05D010132 2.2e-41 174.1 370 35.4
FAN06G3778 Fragaria x ananassa HOM05D007222 ORTHO05D010132 8.5e-41 172.2 173 56.6
Prupe.5G216900 Prunus persica HOM05D007222 ORTHO05D010132 4.7e-39 166.4 342 36.8
FvH4_5g16160 Fragaria vesca HOM05D007222 ORTHO05D019190 6.1e-39 166.0 402 33.8
FAN06G0895 Fragaria x ananassa HOM05D007222 ORTHO05D046523 1.0e-38 165.2 156 59.0
RcHm_v2.0_Chr7g0179991 Rosa chinensis HOM05D007222 ORTHO05D019190 2.3e-38 164.1 381 34.1
Prupe.8G014700 Prunus persica HOM05D007222 ORTHO05D010132 5.2e-38 162.9 345 35.1
FAN18G1099 Fragaria x ananassa HOM05D007222 ORTHO05D019190 8.8e-38 162.2 402 33.3
Prupe.2G232100 Prunus persica HOM05D007222 ORTHO05D010132 8.8e-38 162.2 390 33.3
Prupe.3G221000 Prunus persica HOM05D007222 ORTHO05D036617 1.1e-37 161.8 378 34.9
Prupe.3G220200 Prunus persica HOM05D007222 ORTHO05D036617 1.5e-37 161.4 406 33.5
Prupe.5G196600 Prunus persica HOM05D007222 ORTHO05D010132 1.5e-37 161.4 359 35.9
MD06G1179300 Malus domestica HOM05D007222 ORTHO05D010132 2.6e-37 160.6 437 32.3
Prupe.3G199700 Prunus persica HOM05D007222 ORTHO05D010132 7.4e-37 159.1 346 35.0
Prupe.5G190500 Prunus persica HOM05D007222 ORTHO05D010132 1.1e-35 155.2 343 33.2
Prupe.5G190600 Prunus persica HOM05D007222 ORTHO05D010132 3.1e-35 153.7 345 33.0
Prupe.5G196400 Prunus persica HOM05D007222 ORTHO05D010132 9.1e-35 152.1 303 37.3
Prupe.5G190300 Prunus persica HOM05D007222 ORTHO05D010132 1.2e-34 151.8 343 35.0
Prupe.I003600 Prunus persica HOM05D007222 ORTHO05D010132 2.6e-34 150.6 343 34.1
FAN18G1328 Fragaria x ananassa HOM05D007222 ORTHO05D029649 8.5e-33 145.6 397 33.5
Prupe.3G199800 Prunus persica HOM05D007222 ORTHO05D010132 8.5e-33 145.6 346 33.2
FvH4_5g02900 Fragaria vesca HOM05D007222 ORTHO05D029649 1.9e-32 144.4 397 33.8
FAN13G2764 Fragaria x ananassa HOM05D007222 ORTHO05D029649 5.5e-32 142.9 331 36.6
FAN18G1465 Fragaria x ananassa HOM05D007222 ORTHO05D035251 1.8e-30 137.9 403 28.5
Prupe.5G196800 Prunus persica HOM05D007222 ORTHO05D010132 6.7e-30 136.0 284 37.0
Prupe.7G215500 Prunus persica HOM05D007222 ORTHO05D010132 3.7e-28 130.2 252 37.3
FAN01G0286 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.8e-27 127.9 345 30.1
FAN06G1627 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.4e-27 127.5 85 65.9
FvH4_5g02920 Fragaria vesca HOM05D007222 ORTHO05D046396 1.6e-26 124.8 365 30.1
FAN18G3407 Fragaria x ananassa HOM05D007222 ORTHO05D046396 7.7e-26 122.5 365 29.9
FvH4_5g15971 Fragaria vesca HOM05D007222 ORTHO05D035251 6.5e-25 119.4 320 30.9
FAN08G3302 Fragaria x ananassa HOM05D007222 ORTHO05D020701 1.9e-24 117.9 351 32.5
FAN19G1742 Fragaria x ananassa HOM05D007222 ORTHO05D020701 1.9e-24 117.9 341 32.0
Prupe.7G215400 Prunus persica HOM05D007222 ORTHO05D010132 1.9e-24 117.9 309 33.7
FAN03G1041 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.5e-24 117.5 101 60.4
FAN08G2897 Fragaria x ananassa HOM05D007222 ORTHO05D029649 5.5e-24 116.3 259 33.6
RcHm_v2.0_Chr7g0219841 Rosa chinensis HOM05D007222 ORTHO05D020701 9.4e-24 115.5 344 31.4
MD06G1178900 Malus domestica HOM05D007222 ORTHO05D010132 2.7e-23 114.0 244 36.9
RcHm_v2.0_Chr4g0388551 Rosa chinensis HOM05D007222 ORTHO05D010132 4.7e-23 113.2 347 28.5
RcHm_v2.0_Chr2g0100421 Rosa chinensis HOM05D013290 ORTHO05D016295 4.5e-18 96.7 340 27.1
FAN03G0304 Fragaria x ananassa HOM05D000202 ORTHO05D000117 5.5e-16 89.7 79 58.2
FAN18G3680 Fragaria x ananassa HOM05D007222 ORTHO05D020701 1.2e-15 88.6 346 27.7
FvH4_5g15972 Fragaria vesca HOM05D007222 ORTHO05D035251 1.0e-14 85.5 176 32.4
FAN26G0118 Fragaria x ananassa HOM05D013290 ORTHO05D016295 3.0e-14 84.0 289 29.8
FvH4_1g11671 Fragaria vesca HOM05D013290 ORTHO05D016295 4.0e-14 83.6 287 29.3
FAN10G0917 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.0e-13 81.3 75 60.0
MD06G1078700 Malus domestica HOM05D007222 ORTHO05D010132 3.4e-13 80.5 176 33.5
FAN19G0139 Fragaria x ananassa HOM05D013290 ORTHO05D016295 4.4e-13 80.1 285 29.1
FAN19G1864 Fragaria x ananassa HOM05D013290 ORTHO05D016295 4.4e-13 80.1 274 28.1
FAN06G2293 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.7e-13 79.7 104 45.2
FAN26G0503 Fragaria x ananassa HOM05D013290 ORTHO05D016295 5.7e-13 79.7 217 30.0
FAN26G2054 Fragaria x ananassa HOM05D013290 ORTHO05D016295 9.8e-13 79.0 217 30.9
FvH4_7g25981 Fragaria vesca HOM05D007222 ORTHO05D046523 1.3e-12 78.6 64 65.6
FvH4_5g25390 Fragaria vesca HOM05D007222 ORTHO05D020701 2.8e-12 77.4 136 36.0
Prupe.5G149900 Prunus persica HOM05D007222 ORTHO05D010132 3.7e-12 77.0 128 42.2
RcHm_v2.0_Chr7g0180241 Rosa chinensis HOM05D000007 ORTHO05D019190 1.1e-11 75.5 179 31.8
MD14G1191600 Malus domestica HOM05D007222 ORTHO05D048640 2.4e-11 74.3 154 38.3
Prupe.5G121900 Prunus persica HOM05D007222 ORTHO05D010132 9.2e-11 72.4 197 31.5
FAN03G0076 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.5e-10 70.5 60 61.7
MD14G1191500 Malus domestica HOM05D007222 ORTHO05D048640 3.5e-10 70.5 152 38.2
MD01G1106600 Malus domestica HOM05D007222 ORTHO05D010132 8.6e-09 65.9 135 31.1
MD02G1032200 Malus domestica HOM05D007222 ORTHO05D010132 2.5e-08 64.3 105 35.2
MD16G1080700 Malus domestica HOM05D007222 ORTHO05D010132 3.3e-08 63.9 93 40.9


User provided reference genes

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