Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.7e-109 399.8 279 100.0
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 6.4e-109 397.9 279 93.9
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 2.9e-101 372.5 279 91.0
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 8.4e-101 370.9 281 87.5
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 3.8e-93 345.5 340 73.2
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 1.1e-79 300.8 285 82.8
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.2e-77 293.1 384 59.9
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 5.3e-63 245.4 148 88.5
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 1.5e-52 210.7 310 54.8
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 1.7e-48 197.2 297 58.2
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 1.5e-41 174.1 296 44.6
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 7.5e-41 171.8 317 51.1
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 2.8e-40 169.9 276 50.4
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 8.3e-40 168.3 277 48.7
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 1.1e-39 167.9 298 57.7
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 1.1e-39 167.9 257 51.0
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 3.1e-39 166.4 274 49.6
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 5.4e-39 165.6 271 53.5
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 4.5e-38 162.5 287 50.9
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 1.7e-37 160.6 265 54.7
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 3.8e-37 159.5 277 57.0
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 5.6e-36 155.6 346 37.3
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 1.6e-35 154.1 267 55.8
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 2.1e-35 153.7 289 57.1
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 2.1e-35 153.7 278 50.4
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 3.6e-35 152.9 262 56.9
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 4.7e-35 152.5 291 43.6
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 8.0e-35 151.8 161 55.3
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 1.8e-34 150.6 292 42.8
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 4.0e-34 149.4 300 46.3
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 5.2e-34 149.1 290 55.9
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 5.2e-34 149.1 297 44.8
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 6.8e-34 148.7 252 45.2
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 6.8e-34 148.7 299 37.8
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 2.0e-33 147.1 291 56.7
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 2.6e-33 146.7 291 45.4
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 4.4e-33 146.0 259 48.6
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 4.4e-33 146.0 303 46.5
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 4.4e-33 146.0 294 38.1
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 5.7e-33 145.6 284 51.1
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 9.8e-33 144.8 277 45.5
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 2.9e-32 143.3 279 44.1
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 4.9e-32 142.5 315 46.7
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 4.9e-32 142.5 181 48.6
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 1.1e-31 141.4 293 44.7
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 1.1e-31 141.4 311 35.0
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 1.4e-31 141.0 268 43.7
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 1.6e-30 137.5 281 34.5
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 3.5e-30 136.3 262 55.3
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 4.6e-30 136.0 279 38.4
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 4.6e-30 136.0 294 44.2
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 1.0e-29 134.8 259 50.6
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 1.7e-29 134.0 285 49.5
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 2.3e-29 133.7 302 40.4
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 3.9e-29 132.9 294 44.2
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 6.6e-29 132.1 149 49.0
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 1.1e-28 131.3 269 36.8
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 1.5e-28 131.0 265 50.6
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 1.5e-28 131.0 291 33.0
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 4.3e-28 129.4 249 51.4
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 5.6e-28 129.0 278 42.1
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 1.2e-27 127.9 156 45.5
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 1.4e-26 124.4 249 45.0
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 2.3e-26 123.6 273 44.0
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 2.3e-26 123.6 276 43.5
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 6.8e-26 122.1 268 48.1
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 6.8e-26 122.1 287 45.6
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 2.0e-25 120.6 251 39.8
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 7.5e-25 118.6 269 40.9
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 1.7e-24 117.5 149 47.7
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 2.2e-24 117.1 270 50.7
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 2.9e-24 116.7 160 44.4
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 6.4e-24 115.5 151 47.7
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 3.2e-23 113.2 283 34.6
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 3.2e-23 113.2 274 36.5
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 1.6e-22 110.9 274 40.5
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 6.0e-22 109.0 280 38.2
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 7.8e-22 108.6 269 44.2
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 3.9e-21 106.3 320 35.9
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 5.0e-21 105.9 303 38.0
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 5.0e-21 105.9 87 59.8
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 3.3e-20 103.2 309 30.7
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 7.3e-20 102.1 161 43.5
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 7.3e-20 102.1 281 30.2
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 7.3e-20 102.1 281 43.4
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 1.2e-19 101.3 302 34.8
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 1.6e-19 100.9 271 53.1
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 1.6e-19 100.9 311 37.9
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 3.6e-19 99.8 279 35.8
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 1.4e-18 97.8 277 47.3
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 4.0e-18 96.3 277 45.8
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 4.0e-18 96.3 277 45.8
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 1.2e-17 94.7 330 31.2
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 3.4e-17 93.2 303 33.0
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 1.3e-16 91.3 266 50.0
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 1.3e-16 91.3 308 31.2
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 1.7e-16 90.9 266 50.8
Gohir.A11G078900 Gossypium hirsutum HOM05D007090 ORTHO05D008993 4.1e-15 86.3 189 47.1
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 1.6e-14 84.3 249 35.3
ECA234G4391 Erigeron canadensis HOM05D007090 ORTHO05D008993 2.1e-14 84.0 142 39.4
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 6.0e-14 82.4 66 57.6
SMO137G0209 Selaginella moellendorffii HOM05D007090 ORTHO05D008993 1.8e-10 70.9 136 33.1
SEGI_04858 Sequoiadendron giganteum HOM05D007090 ORTHO05D008993 1.8e-10 70.9 56 50.0
Mapoly0035s0135 Marchantia polymorpha HOM05D007090 ORTHO05D008993 4.0e-10 69.7 128 33.6
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 2.0e-09 67.4 157 28.7
CBR_g23736 Chara braunii HOM05D007090 ORTHO05D008993 4.4e-09 66.2 100 33.0


User provided reference genes

Program Settings