Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G1951 Fragaria x ananassa HOM05D006288 ORTHO05D007416 4.0e-31 137.5 71 100.0
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.4e-14 81.3 104 51.9
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.1e-11 72.0 104 50.0
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 2.3e-10 68.6 120 44.2
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 3.0e-10 68.2 120 40.8
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 1.6e-08 62.4 119 37.8
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 2.8e-08 61.6 116 37.9
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 4.7e-08 60.8 103 38.8
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 6.2e-08 60.5 116 36.2
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.1e-07 59.7 45 73.3
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 1.4e-07 59.3 103 39.8
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 1.4e-07 59.3 102 38.2
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 2.4e-07 58.5 102 37.3
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 2.4e-07 58.5 102 37.3
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 3.1e-07 58.2 102 37.3
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 4.0e-07 57.8 106 39.6
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 6.8e-07 57.0 106 38.7
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 6.8e-07 57.0 106 38.7
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 6.8e-07 57.0 106 38.7
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 6.8e-07 57.0 111 37.8
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 6.8e-07 57.0 101 39.6
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 8.9e-07 56.6 103 38.8
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 8.9e-07 56.6 103 37.9
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.2e-06 56.2 102 37.3
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.2e-06 56.2 102 37.3
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 1.2e-06 56.2 102 37.3
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 1.2e-06 56.2 105 35.2
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 1.2e-06 56.2 103 38.8
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 1.2e-06 56.2 106 38.7
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 1.2e-06 56.2 103 37.9
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 1.5e-06 55.8 111 36.0
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 1.5e-06 55.8 103 36.9
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 1.5e-06 55.8 103 38.8
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 2.0e-06 55.5 124 34.7
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 2.0e-06 55.5 106 37.7
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 2.6e-06 55.1 105 40.0
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 2.6e-06 55.1 107 38.3
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 3.4e-06 54.7 101 36.6
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 3.4e-06 54.7 115 34.8
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 3.4e-06 54.7 102 35.3
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 3.4e-06 54.7 104 36.5
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 4.4e-06 54.3 107 37.4
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 4.4e-06 54.3 107 37.4
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 4.4e-06 54.3 107 37.4
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 5.8e-06 53.9 30 93.3
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 5.8e-06 53.9 116 35.3
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 5.8e-06 53.9 101 38.6
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 7.6e-06 53.5 104 34.6
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 7.6e-06 53.5 102 36.3
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 7.6e-06 53.5 99 37.4
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 7.6e-06 53.5 99 37.4
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 9.9e-06 53.1 99 37.4


User provided reference genes

Program Settings