Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 7.8e-180 633.6 314 100.0
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.4e-173 612.1 339 91.4
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 8.7e-155 550.4 313 90.1
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.5e-154 549.7 313 89.8
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 1.1e-128 463.8 322 76.7
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 9.7e-122 440.7 313 75.4
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 1.7e-118 429.9 323 70.9
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 1.4e-115 420.2 325 68.9
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.4e-114 415.2 245 88.2
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 1.8e-107 393.3 311 66.9
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 3.0e-107 392.5 314 66.6
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 1.5e-106 390.2 302 67.9
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 5.7e-106 388.3 307 68.4
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 5.7e-106 388.3 273 71.8
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 2.8e-105 386.0 291 69.1
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 8.3e-105 384.4 275 71.3
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 4.1e-104 382.1 273 70.7
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 5.4e-104 381.7 275 71.3
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 5.4e-104 381.7 295 68.5
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 9.1e-104 380.9 275 69.8
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 1.6e-103 380.2 328 63.4
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 2.7e-103 379.4 273 69.2
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 3.5e-103 379.0 282 69.1
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 1.0e-102 377.5 313 63.6
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.0e-102 377.5 274 69.0
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 1.3e-102 377.1 273 70.3
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 2.3e-102 376.3 299 66.9
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 5.0e-102 375.2 291 67.7
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 6.6e-102 374.8 274 69.0
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 1.1e-101 374.0 275 69.1
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.9e-101 373.2 274 68.6
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 5.6e-101 371.7 282 68.4
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 7.2e-101 371.3 275 68.4
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 1.2e-100 370.5 295 64.7
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 1.2e-100 370.5 275 68.7
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 1.2e-100 370.5 292 66.1
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 1.0e-99 367.5 275 66.2
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 1.0e-99 367.5 275 68.0
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 1.4e-99 367.1 275 67.6
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.8e-99 366.7 275 68.0
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 5.2e-99 365.2 273 70.0
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 5.2e-99 365.2 274 69.0
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 8.9e-99 364.4 275 68.4
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 8.9e-99 364.4 287 65.9
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 1.2e-98 364.0 282 64.9
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 1.5e-98 363.6 274 67.9
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 2.0e-98 363.2 305 63.9
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 3.4e-98 362.5 281 67.3
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 1.7e-97 360.1 304 62.8
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 3.7e-97 359.0 274 66.8
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 3.7e-97 359.0 274 66.8
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 3.7e-97 359.0 276 66.3
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 6.4e-97 358.2 304 61.8
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 6.4e-97 358.2 275 66.2
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 1.1e-96 357.5 298 62.8
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 1.1e-96 357.5 274 66.4
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 1.1e-96 357.5 275 66.2
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 1.4e-96 357.1 275 66.5
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 3.2e-96 355.9 275 66.5
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 3.2e-96 355.9 275 66.9
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 4.1e-96 355.5 275 65.8
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 1.2e-95 354.0 282 64.2
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.3e-94 350.5 275 64.4
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 3.0e-94 349.4 274 65.7
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 3.0e-94 349.4 326 58.3
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 3.9e-94 349.0 268 65.7
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 5.0e-94 348.6 275 63.6
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 8.6e-94 347.8 274 65.7
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 8.6e-94 347.8 275 65.1
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 1.5e-93 347.1 273 65.2
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 2.5e-93 346.3 276 64.9
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 3.3e-93 345.9 308 61.0
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 4.3e-93 345.5 296 61.1
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 4.3e-93 345.5 270 66.7
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 5.6e-93 345.1 298 61.1
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 9.5e-93 344.4 282 61.3
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 1.6e-92 343.6 293 61.4
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.0e-91 340.9 275 62.2
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.8e-91 340.1 295 60.0
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 2.3e-91 339.7 273 63.0
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 8.9e-91 337.8 291 62.2
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 2.0e-90 336.7 302 58.6
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 5.8e-90 335.1 251 68.1
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 7.5e-90 334.7 274 61.7
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 3.7e-89 332.4 215 77.2
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 7.0e-88 328.2 275 62.5
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 9.2e-88 327.8 314 60.2
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 2.1e-84 316.6 262 62.6
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 1.7e-81 307.0 251 64.1
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 1.7e-81 307.0 277 57.0
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 9.2e-80 301.2 300 54.7
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 3.3e-77 292.7 253 62.8
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 1.1e-75 287.7 275 52.7
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.0e-75 285.8 243 66.7
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 8.9e-75 284.6 243 66.3
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 1.1e-72 277.7 274 55.8
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 1.9e-72 276.9 251 55.4
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 6.4e-65 251.9 204 63.7
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 2.1e-60 236.9 164 70.7
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 5.3e-59 232.3 379 38.8
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 7.6e-58 228.4 276 49.3
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 6.9e-51 205.3 185 61.6
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 2.2e-49 200.3 167 62.9
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.8e-46 190.7 121 75.2
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 3.9e-46 189.5 122 76.2
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 1.7e-41 174.1 155 60.6
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 5.3e-35 152.5 129 62.0
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 1.3e-30 137.9 82 76.8
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 4.1e-27 126.3 98 63.3
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 3.6e-23 113.2 85 65.9
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 6.1e-23 112.5 70 74.3
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 8.2e-20 102.1 75 66.7
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 6.9e-19 99.0 143 42.7
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 4.2e-16 89.7 60 70.0
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 7.9e-15 85.5 60 66.7
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-13 81.6 56 67.9
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 2.9e-09 67.0 51 68.6
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 1.5e-08 64.7 41 68.3
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 1.4e-06 58.2 44 63.6
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 6.7e-06 55.8 38 63.2


User provided reference genes

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