Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G1899 Fragaria x ananassa HOM05D005592 ORTHO05D006067 6.6e-309 1063.1 521 100.0
FvH4_7g26380 Fragaria vesca HOM05D005592 ORTHO05D006067 2.0e-297 1025.0 540 94.8
FAN03G0809 Fragaria x ananassa HOM05D005592 ORTHO05D006067 7.9e-294 1013.1 540 93.0
FAN01G0671 Fragaria x ananassa HOM05D005592 ORTHO05D006067 1.9e-292 1008.4 540 92.8
RcHm_v2.0_Chr1g0372931 Rosa chinensis HOM05D005592 ORTHO05D006067 5.5e-263 910.6 540 83.3
MD07G1239100 Malus domestica HOM05D005592 ORTHO05D006067 3.5e-225 785.0 541 72.8
Prupe.2G267900 Prunus persica HOM05D005592 ORTHO05D006067 1.3e-211 740.0 541 70.4
Cfa001174 Carpinus fangiana HOM05D005592 ORTHO05D006067 7.9e-185 651.0 540 61.3
GSVIVG01032876001 Vitis vinifera HOM05D005592 ORTHO05D006067 4.9e-179 631.7 534 61.2
CANSAT56G3301 Cannabis sativa HOM05D005592 ORTHO05D006067 6.2e-174 614.8 541 60.3
Ciclev10030128m.g Citrus clementina HOM05D005592 ORTHO05D006067 8.2e-174 614.4 541 58.6
Atru.chr12.227 Acer truncatum HOM05D005592 ORTHO05D006067 1.5e-172 610.1 541 57.9
TAR369G0313 Trochodendron aralioides HOM05D005592 ORTHO05D006067 3.4e-172 609.0 545 57.6
Hma1.2p1_0264F.1_g105700 Hydrangea macrophylla HOM05D005592 ORTHO05D006067 1.7e-171 606.7 546 58.2
Actinidia13627 Actinidia chinensis HOM05D005592 ORTHO05D006067 8.4e-171 604.4 546 57.5
Lj1g0017160 Lotus japonicus HOM05D005592 ORTHO05D006067 9.0e-165 584.3 542 56.3
Dinv21875 Davidia involucrata HOM05D005592 ORTHO05D006067 2.2e-163 579.7 541 55.6
Thecc.10G188900 Theobroma cacao HOM05D005592 ORTHO05D006067 8.5e-163 577.8 543 54.3
Lj1C971G13 Lonicera japonica HOM05D005592 ORTHO05D006067 1.4e-162 577.0 567 54.1
Lalb_Chr23g0272061 Lupinus albus HOM05D005592 ORTHO05D006067 1.8e-160 570.1 541 55.8
TPR.G13972 Trifolium pratense HOM05D005592 ORTHO05D006067 6.7e-160 568.2 545 55.6
Glyma.06G139600 Glycine max HOM05D005592 ORTHO05D006067 1.1e-159 567.4 544 55.0
Potri.016G144200 Populus trichocarpa HOM05D005592 ORTHO05D006067 4.3e-159 565.5 540 54.8
Psat5g070400 Pisum sativum HOM05D005592 ORTHO05D006067 7.4e-159 564.7 537 55.9
Sopen03g025240 Solanum pennellii HOM05D005592 ORTHO05D006067 1.7e-158 563.5 541 53.4
CsaV3_1G032540 Cucumis sativus L. HOM05D005592 ORTHO05D006067 1.1e-157 560.8 545 54.7
Medtr3g093440 Medicago truncatula HOM05D005592 ORTHO05D006067 3.1e-157 559.3 544 54.4
TWI75G0267 Tripterygium wilfordii HOM05D005592 ORTHO05D006067 6.9e-157 558.1 544 53.5
Glyma.04G225100 Glycine max HOM05D005592 ORTHO05D006067 1.5e-156 557.0 546 54.9
Gohir.D13G009600 Gossypium hirsutum HOM05D005592 ORTHO05D006067 1.7e-155 553.5 533 54.0
Gorai.013G010300 Gossypium raimondii HOM05D005592 ORTHO05D006067 8.5e-155 551.2 535 54.0
arahy.Tifrunner.gnm1.ann1.8FW391 Arachis hypogaea HOM05D005592 ORTHO05D006067 1.1e-154 550.8 541 52.9
Ca_16843_v3 Cicer arietinum L. HOM05D005592 ORTHO05D006067 1.1e-154 550.8 549 53.0
arahy.Tifrunner.gnm1.ann1.IE8JUR Arachis hypogaea HOM05D005592 ORTHO05D006067 1.9e-154 550.1 541 52.9
Manes.18G121600 Manihot esculenta HOM05D005592 ORTHO05D006067 1.9e-154 550.1 541 54.5
MELO3C002725.2 Cucumis melo HOM05D005592 ORTHO05D006067 3.2e-154 549.3 545 54.3
Gohir.A13G008900 Gossypium hirsutum HOM05D005592 ORTHO05D006067 7.2e-154 548.1 533 54.4
Aqoxy2G00637 Aquilegia oxysepala HOM05D005592 ORTHO05D006067 9.4e-154 547.7 539 53.1
Phvul.009G040900 Phaseolus vulgaris HOM05D005592 ORTHO05D006067 9.4e-154 547.7 530 56.0
Oeu008098.1 Olea europaea HOM05D005592 ORTHO05D006067 7.9e-153 544.7 523 55.1
PSO339G4695 Papaver somniferum HOM05D005592 ORTHO05D006067 2.0e-151 540.0 548 53.3
Nn5g26734 Nelumbo nucifera HOM05D005592 ORTHO05D006067 2.6e-151 539.7 554 52.2
SalBow3G4308 Salvia bowleyana HOM05D005592 ORTHO05D006067 3.5e-148 529.3 582 48.5
CiPaw.01G308100 Carya illinoinensis HOM05D005592 ORTHO05D006067 4.5e-148 528.9 542 53.1
ClCG03G006970 Citrullus lanatus HOM05D005592 ORTHO05D006067 1.9e-146 523.5 541 52.7
Migut.F00557 Erythranthe guttata HOM05D005592 ORTHO05D006067 4.2e-146 522.3 546 50.5
Cc02_g04980 Coffea canephora HOM05D005592 ORTHO05D006067 2.7e-145 519.6 547 50.5
PGR083G1109 Punica granatum HOM05D005592 ORTHO05D006067 2.0e-143 513.5 541 48.6
COL.COLO4_19504 Corchorus olitorius HOM05D005592 ORTHO05D006067 2.6e-143 513.1 538 50.4
EL10Ac2g02700 Beta vulgaris HOM05D005592 ORTHO05D006067 3.7e-142 509.2 541 50.5
THA.LOC104813079 Tarenaya hassleriana HOM05D005592 ORTHO05D006067 3.5e-140 502.7 545 48.4
Sp1g28850 Schrenkiella parvula HOM05D005592 ORTHO05D006067 5.9e-140 501.9 541 48.1
ATR1126G052 Amborella trichopoda HOM05D005592 ORTHO05D006067 1.5e-138 497.3 539 49.7
Ah.10g029720 Amaranthus hybridus HOM05D005592 ORTHO05D006067 4.2e-138 495.7 540 48.5
AL1G47780 Arabidopsis lyrata HOM05D005592 ORTHO05D006067 4.7e-137 492.3 545 47.2
HanXRQChr09g0252351 Helianthus annuus HOM05D005592 ORTHO05D006067 2.0e-135 486.9 544 50.0
Nitab4.5_0001130g0030 Nicotiana tabacum HOM05D005592 ORTHO05D006067 2.6e-135 486.5 543 48.4
Lsat_1_v5_gn_9_60521 Lactuca sativa HOM05D005592 ORTHO05D006067 4.4e-135 485.7 538 50.2
Hma1.2p1_0264F.1_g105710 Hydrangea macrophylla HOM05D005592 ORTHO05D006067 7.5e-135 485.0 434 57.1
Hund15772 Selenicereus undatus HOM05D005592 ORTHO05D006067 1.1e-133 481.1 542 47.0
Thhalv10006832m.g Eutrema salsugineum HOM05D005592 ORTHO05D006067 3.1e-133 479.6 549 47.4
Aa31LG6G7910 Aethionema arabicum HOM05D005592 ORTHO05D006067 1.7e-131 473.8 547 45.5
ECA232G3941 Erigeron canadensis HOM05D005592 ORTHO05D006067 2.2e-131 473.4 562 47.3
Carub.0001s3159 Capsella rubella HOM05D005592 ORTHO05D006067 3.8e-131 472.6 545 45.9
BolC5t32537H Brassica oleracea HOM05D005592 ORTHO05D006067 6.5e-131 471.9 545 46.8
C05p38090 Brassica napus HOM05D005592 ORTHO05D006067 1.5e-130 470.7 545 47.2
Sc10g0003140 Simmondsia chinensis HOM05D005592 ORTHO05D006067 1.5e-130 470.7 544 47.1
BcaB03g13702 Brassica carinata HOM05D005592 ORTHO05D006067 3.2e-130 469.5 552 46.9
BcaC05g27807 Brassica carinata HOM05D005592 ORTHO05D006067 3.2e-130 469.5 545 47.0
Nitab4.5_0000103g0070 Nicotiana tabacum HOM05D005592 ORTHO05D006067 3.6e-129 466.1 542 48.3
AT1G33400 Arabidopsis thaliana HOM05D005592 ORTHO05D006067 1.5e-127 460.7 503 46.1
Sed0013074 Sechium edule HOM05D005592 ORTHO05D006067 9.8e-127 458.0 425 56.9
Rhsim03G0155100 Rhododendron simsii HOM05D005592 ORTHO05D006067 2.2e-126 456.8 523 47.2
A05p24340 Brassica napus HOM05D005592 ORTHO05D006067 2.8e-126 456.4 569 44.8
Sabra04G0160100 Salix brachista HOM05D005592 ORTHO05D006067 4.8e-126 455.7 534 49.1
unitig_37.g12479 Utricularia gibba HOM05D005592 ORTHO05D006067 8.3e-126 454.9 543 47.3
Os10g0506800 Oryza sativa ssp. japonica HOM05D005592 ORTHO05D006067 7.0e-125 451.8 542 46.7
BraA05t21327Z Brassica rapa HOM05D005592 ORTHO05D006067 2.7e-124 449.9 572 44.2
DCAR_018065 Daucus carota HOM05D005592 ORTHO05D006067 2.7e-124 449.9 520 46.9
HPP92_022562 Vanilla planifolia HOM05D005592 ORTHO05D006067 2.7e-124 449.9 545 45.1
Eucgr.H00237 Eucalyptus grandis HOM05D005592 ORTHO05D006067 1.6e-121 440.7 498 47.4
Duzib066G0005 Durio zibethinus HOM05D005592 ORTHO05D006067 8.6e-107 391.7 359 55.7
Eucgr.E00005 Eucalyptus grandis HOM05D005592 ORTHO05D006067 1.9e-106 390.6 504 42.9
CARHR032840 Cardamine hirsuta HOM05D005592 ORTHO05D006067 3.6e-105 386.3 475 43.2
SGA_v2.0_scaffold60G20866 Striga asiatica HOM05D005592 ORTHO05D006067 1.9e-101 374.0 413 49.4
AUR62032559 Chenopodium quinoa HOM05D005592 ORTHO05D006067 3.2e-101 373.2 535 40.9
FAN10G0852 Fragaria x ananassa HOM05D005592 ORTHO05D006067 1.2e-97 361.3 208 91.8
MBI17_g23520_MAGBIO Magnolia biondii HOM05D005592 ORTHO05D006067 4.7e-97 359.4 462 44.4
SHI08066 Sapria himalayana HOM05D005592 ORTHO05D006067 1.8e-96 357.5 408 47.8
Peaxi162Scf00073g02027 Petunia axillaris HOM05D005592 ORTHO05D006067 1.9e-85 320.9 309 52.8
VMungo1309G2057 Vigna mungo HOM05D005592 ORTHO05D006067 6.9e-80 302.4 334 50.9
vmacro06868 Vaccinium macrocarpon HOM05D005592 ORTHO05D006067 1.2e-79 301.6 394 43.1
AUR62031675 Chenopodium quinoa HOM05D005592 ORTHO05D006067 4.8e-73 279.6 522 35.2
Pp3c22_7900 Physcomitrium patens HOM05D005592 ORTHO05D006067 2.4e-72 277.3 534 34.5
Eucgr.L02747 Eucalyptus grandis HOM05D005592 ORTHO05D006067 4.5e-71 273.1 302 46.7
Mapoly0086s0022 Marchantia polymorpha HOM05D005592 ORTHO05D006067 1.1e-69 268.5 568 33.6
SMO165G0048 Selaginella moellendorffii HOM05D005592 ORTHO05D006067 2.1e-68 264.2 527 33.2
Zm00001eb044040 Zea mays HOM05D005592 ORTHO05D006067 1.0e-62 245.4 317 42.9
Eucgr.E04345 Eucalyptus grandis HOM05D005592 ORTHO05D006067 6.0e-60 236.1 247 50.2
VMungo1309G2981 Vigna mungo HOM05D005592 ORTHO05D006067 7.4e-58 229.2 231 51.9
SMO139G0018 Selaginella moellendorffii HOM05D005592 ORTHO05D006067 1.4e-56 224.9 501 31.7
Solyc03g095230.2 Solanum lycopersicum HOM05D005592 ORTHO05D006067 4.2e-53 213.4 207 54.6
CAN.G1151.4 Capsicum annuum HOM05D005592 ORTHO05D006067 2.3e-51 207.6 205 54.6
Haze_17390 Corylus avellana HOM05D005592 ORTHO05D006067 8.5e-46 189.1 141 66.0
AagrBONN_evm.TU.Sc2ySwM_344.3533 Anthoceros agrestis HOM05D005592 ORTHO05D006067 4.2e-45 186.8 377 30.5
Peaxi162Scf00073g02026 Petunia axillaris HOM05D005592 ORTHO05D006067 2.8e-41 174.1 200 48.5
Haze_17388 Corylus avellana HOM05D005592 ORTHO05D006067 6.5e-38 162.9 105 72.4
SEGI_39178 Sequoiadendron giganteum HOM05D005592 ORTHO05D006067 2.4e-32 144.4 196 40.3
Thecc.10G188500 Theobroma cacao HOM05D005592 ORTHO05D006067 3.1e-32 144.1 148 51.4
Actinidia27252 Actinidia chinensis HOM05D005592 ORTHO05D006067 1.2e-31 142.1 105 62.9
CAN.G1151.3 Capsicum annuum HOM05D005592 ORTHO05D006067 4.2e-29 133.7 105 60.0
vmacro06869 Vaccinium macrocarpon HOM05D005592 ORTHO05D006067 1.5e-26 125.2 127 52.0
Cpa.g.sc41.44 Carica papaya HOM05D005592 ORTHO05D006067 1.1e-24 119.0 184 38.6
Cpa.g.sc41.43 Carica papaya HOM05D005592 ORTHO05D006067 2.4e-24 117.9 72 73.6
Cpa.g.sc41.45 Carica papaya HOM05D005592 ORTHO05D006067 6.5e-22 109.8 119 47.9
Hma1.2p1_0053F.1_g030850 Hydrangea macrophylla HOM05D003724 ORTHO05D004367 1.2e-15 89.0 69 62.3
CDE04G2082 Ceratophyllum demersum HOM05D005592 ORTHO05D006067 6.5e-14 83.2 112 43.8
SEGI_10878 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 1.5e-13 82.0 71 53.5
AagrBONN_evm.TU.Sc2ySwM_344.3534 Anthoceros agrestis HOM05D005592 ORTHO05D006067 2.7e-12 77.8 118 34.7
Lsat_1_v5_gn_6_109160 Lactuca sativa HOM05D004492 ORTHO05D005602 6.8e-11 73.2 312 22.4
Actinidia27253 Actinidia chinensis HOM05D005592 ORTHO05D006067 1.5e-10 72.0 148 35.8
CARHR032830 Cardamine hirsuta HOM05D005592 ORTHO05D006067 3.4e-10 70.9 39 74.4
HanXRQChr05g0149221 Helianthus annuus HOM05D004492 ORTHO05D005602 8.3e-09 66.2 311 21.9
MCO04G530 Micromonas commoda HOM05D005592 ORTHO05D006067 8.3e-09 66.2 314 22.9
Migut.H01297 Erythranthe guttata HOM05D000247 ORTHO05D003114 3.1e-08 64.3 138 33.3
CsaV3_5G023260 Cucumis sativus L. HOM05D004492 ORTHO05D005602 4.1e-08 63.9 306 20.9
unitig_46.g18495 Utricularia gibba HOM05D004492 ORTHO05D005602 4.1e-08 63.9 337 21.7
ECA246G3183 Erigeron canadensis HOM05D004492 ORTHO05D005602 5.4e-08 63.5 322 22.7
CSS0015014 Camellia sinensis var. sinensis HOM05D005592 ORTHO05D006067 2.0e-07 61.6 61 45.9
ClCG03G009360 Citrullus lanatus HOM05D004492 ORTHO05D005602 2.7e-07 61.2 319 21.3
PSO170G3797 Papaver somniferum HOM05D004492 ORTHO05D005602 3.5e-07 60.8 316 21.2
TWI39G0736 Tripterygium wilfordii HOM05D000868 ORTHO05D000711 3.5e-07 60.8 110 33.6
GSVIVG01008928001 Vitis vinifera HOM05D004492 ORTHO05D005602 3.5e-07 60.8 308 20.8
MELO3C026324.2 Cucumis melo HOM05D002345 ORTHO05D002391 4.5e-07 60.5 101 33.7
SalBow7G0677 Salvia bowleyana HOM05D004492 ORTHO05D005602 4.5e-07 60.5 318 21.4
CsaV3_4G027740 Cucumis sativus L. HOM05D002345 ORTHO05D002391 5.9e-07 60.1 101 32.7
SalBow7G1607 Salvia bowleyana HOM05D004492 ORTHO05D005602 5.9e-07 60.1 319 22.6
ATR0684G004 Amborella trichopoda HOM05D004492 ORTHO05D005602 7.7e-07 59.7 315 22.5
Migut.O00229 Erythranthe guttata HOM05D000247 ORTHO05D003114 7.7e-07 59.7 191 25.7
PSO478G4749 Papaver somniferum HOM05D000247 ORTHO05D003114 1.0e-06 59.3 175 28.6
RcHm_v2.0_Chr6g0294891 Rosa chinensis HOM05D004492 ORTHO05D005602 1.0e-06 59.3 311 21.9
SalBow5G4045 Salvia bowleyana HOM05D000247 ORTHO05D003114 1.0e-06 59.3 132 30.3
MELO3C003048.2 Cucumis melo HOM05D004492 ORTHO05D005602 1.7e-06 58.5 306 19.9
Oeu047923.1 Olea europaea HOM05D004492 ORTHO05D005602 1.7e-06 58.5 310 21.9
Dinv27371 Davidia involucrata HOM05D004492 ORTHO05D005602 2.3e-06 58.2 308 20.8
Manes.03G102400 Manihot esculenta HOM05D000868 ORTHO05D000711 2.3e-06 58.2 122 30.3
Migut.C01175 Erythranthe guttata HOM05D004492 ORTHO05D005602 2.9e-06 57.8 319 22.3
A01p13910 Brassica napus HOM05D000247 ORTHO05D003114 3.8e-06 57.4 164 26.2
BraA01t01337Z Brassica rapa HOM05D000247 ORTHO05D003114 3.8e-06 57.4 164 26.2
Sp7g20690 Schrenkiella parvula HOM05D000247 ORTHO05D003114 3.8e-06 57.4 164 26.2
Cfa023451 Carpinus fangiana HOM05D000115 ORTHO05D005317 6.6e-06 56.6 153 28.1
Haze_17389 Corylus avellana HOM05D005592 ORTHO05D006067 6.6e-06 56.6 49 55.1
Manes.15G093000 Manihot esculenta HOM05D000868 ORTHO05D000711 6.6e-06 56.6 102 34.3
TAR625G1407 Trochodendron aralioides HOM05D004492 ORTHO05D005602 6.6e-06 56.6 308 19.8
MSTRG.11523 Avicennia marina HOM05D000247 ORTHO05D003114 8.6e-06 56.2 164 29.3
CiPaw.10G075600 Carya illinoinensis HOM05D001369 ORTHO05D001235 8.6e-06 56.2 127 31.5
Migut.C01177 Erythranthe guttata HOM05D004492 ORTHO05D005602 8.6e-06 56.2 310 21.6
Eucgr.G00611 Eucalyptus grandis HOM05D004492 ORTHO05D005602 8.6e-06 56.2 319 20.7
SEGI_18907 Sequoiadendron giganteum HOM05D002462 ORTHO05D002893 8.6e-06 56.2 152 26.3
TPR.G37095 Trifolium pratense HOM05D001369 ORTHO05D001235 8.6e-06 56.2 144 34.0


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