Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G1803 Fragaria x ananassa HOM05D006477 ORTHO05D008311 2.7e-190 668.7 389 100.0
FAN03G3069 Fragaria x ananassa HOM05D006477 ORTHO05D029725 1.1e-90 337.8 293 66.2
FvH4_7g07070 Fragaria vesca HOM05D006477 ORTHO05D008311 5.7e-39 166.0 86 100.0
FAN10G2338 Fragaria x ananassa HOM05D006477 ORTHO05D008311 2.2e-38 164.1 86 98.8
RcHm_v2.0_Chr1g0337021 Rosa chinensis HOM05D006477 ORTHO05D008311 1.0e-35 155.2 84 94.0
CSS0043287 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 1.7e-35 154.5 85 90.6
MELO3C020371.2 Cucumis melo HOM05D006477 ORTHO05D008311 1.7e-35 154.5 85 90.6
Rhsim07G0044200 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.7e-35 154.5 85 90.6
CSS0025225 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 2.3e-35 154.1 85 90.6
Cc02_g26330 Coffea canephora HOM05D006477 ORTHO05D008311 2.3e-35 154.1 86 89.5
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 2.3e-35 154.1 85 91.8
Rhsim07G0044700 Rhododendron simsii HOM05D006477 ORTHO05D008311 2.9e-35 153.7 85 89.4
vmacro13578 Vaccinium macrocarpon HOM05D006477 ORTHO05D008311 1.1e-34 151.8 86 87.2
Prupe.2G097300 Prunus persica HOM05D006477 ORTHO05D008311 1.5e-34 151.4 85 89.4
MD07G1076600 Malus domestica HOM05D006477 ORTHO05D008311 2.5e-34 150.6 85 87.1
Manes.06G016700 Manihot esculenta HOM05D006477 ORTHO05D008311 2.5e-34 150.6 86 86.0
Manes.06G016750 Manihot esculenta HOM05D006477 ORTHO05D008311 2.5e-34 150.6 86 86.0
QL05p054895 Quercus lobata HOM05D006477 ORTHO05D008311 2.5e-34 150.6 85 90.6
QL05p056339 Quercus lobata HOM05D006477 ORTHO05D008311 2.5e-34 150.6 85 90.6
TWI59G0878 Tripterygium wilfordii HOM05D006477 ORTHO05D008311 2.5e-34 150.6 85 88.2
ClCG06G008130 Citrullus lanatus HOM05D006477 ORTHO05D008311 4.3e-34 149.8 85 87.1
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 4.3e-34 149.8 85 89.4
Nitab4.5_0004594g0090 Nicotiana tabacum HOM05D006477 ORTHO05D008311 5.6e-34 149.4 86 86.0
Actinidia05816 Actinidia chinensis HOM05D006477 ORTHO05D008311 7.2e-34 149.1 85 85.9
MD02G1240300 Malus domestica HOM05D006477 ORTHO05D008311 9.5e-34 148.7 86 84.9
Rhsim07G0124700 Rhododendron simsii HOM05D006477 ORTHO05D008311 9.5e-34 148.7 85 87.1
Haze_15813 Corylus avellana HOM05D006477 ORTHO05D008311 1.2e-33 148.3 85 88.2
Cfa003675 Carpinus fangiana HOM05D006477 ORTHO05D008311 1.6e-33 147.9 85 88.2
MBI04_g32195_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.6e-33 147.9 85 85.9
Actinidia31748 Actinidia chinensis HOM05D006477 ORTHO05D008311 2.8e-33 147.1 85 85.9
Eucgr.E04248 Eucalyptus grandis HOM05D006477 ORTHO05D008311 2.8e-33 147.1 85 85.9
Gohir.A12G270700 Gossypium hirsutum HOM05D006477 ORTHO05D008311 8.0e-33 145.6 86 83.7
Gohir.D12G271100 Gossypium hirsutum HOM05D006477 ORTHO05D008311 8.0e-33 145.6 86 83.7
Gorai.008G291500 Gossypium raimondii HOM05D006477 ORTHO05D008311 8.0e-33 145.6 86 83.7
HanXRQChr15g0495711 Helianthus annuus HOM05D006477 ORTHO05D008311 8.0e-33 145.6 85 82.4
HanXRQChr16g0522681 Helianthus annuus HOM05D006477 ORTHO05D008311 8.0e-33 145.6 85 82.4
Lsat_1_v5_gn_4_40501 Lactuca sativa HOM05D006477 ORTHO05D008311 1.0e-32 145.2 85 83.5
CiPaw.03G039600 Carya illinoinensis HOM05D006477 ORTHO05D008311 1.4e-32 144.8 83 86.7
Duzib128G0861 Durio zibethinus HOM05D006477 ORTHO05D008311 1.8e-32 144.4 85 84.7
AUR62007820 Chenopodium quinoa HOM05D006477 ORTHO05D008311 3.0e-32 143.7 86 82.6
Potri.005G094100 Populus trichocarpa HOM05D006477 ORTHO05D008311 3.0e-32 143.7 84 83.3
SGA_v2.0_scaffold120G32938 Striga asiatica HOM05D006477 ORTHO05D008311 3.0e-32 143.7 85 81.2
Migut.J00830 Erythranthe guttata HOM05D006477 ORTHO05D008311 4.0e-32 143.3 85 80.0
GSVIVG01001179001 Vitis vinifera HOM05D006477 ORTHO05D008311 5.2e-32 142.9 85 85.9
ATR0829G122 Amborella trichopoda HOM05D006477 ORTHO05D008311 6.8e-32 142.5 85 83.5
QL05p056259 Quercus lobata HOM05D006477 ORTHO05D008311 6.8e-32 142.5 80 91.2
Aqoxy7G00962 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.2e-31 141.7 102 72.5
COL.COLO4_37808 Corchorus olitorius HOM05D006477 ORTHO05D008311 1.2e-31 141.7 86 83.7
Nitab4.5_0004800g0020 Nicotiana tabacum HOM05D006477 ORTHO05D008311 1.5e-31 141.4 86 82.6
SalBow6G6803 Salvia bowleyana HOM05D006477 ORTHO05D008311 1.5e-31 141.4 85 80.0
CAN.G700.29 Capsicum annuum HOM05D006477 ORTHO05D008311 2.0e-31 141.0 84 79.8
ECA234G3546 Erigeron canadensis HOM05D006477 ORTHO05D008311 2.6e-31 140.6 85 80.0
EL10Ac6g14607 Beta vulgaris HOM05D006477 ORTHO05D008311 3.4e-31 140.2 85 81.2
COL.COLO4_15215 Corchorus olitorius HOM05D006477 ORTHO05D008311 3.4e-31 140.2 86 82.6
Thecc.07G155600 Theobroma cacao HOM05D006477 ORTHO05D008311 3.4e-31 140.2 85 83.5
PGR042G2475 Punica granatum HOM05D006477 ORTHO05D008311 4.4e-31 139.8 85 80.0
HanXRQChr17g0567251 Helianthus annuus HOM05D006477 ORTHO05D008311 5.7e-31 139.4 84 79.8
MBI04_g32196_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 7.5e-31 139.0 85 78.8
PGSC0003DMG400001789 Solanum tuberosum HOM05D006477 ORTHO05D008311 7.5e-31 139.0 83 81.9
Solyc01g081120.2 Solanum lycopersicum HOM05D006477 ORTHO05D008311 1.3e-30 138.3 83 81.9
Sopen01g032730 Solanum pennellii HOM05D006477 ORTHO05D008311 1.3e-30 138.3 83 81.9
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea HOM05D006477 ORTHO05D008311 2.2e-30 137.5 86 77.9
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea HOM05D006477 ORTHO05D008311 2.2e-30 137.5 86 77.9
ECA234G1029 Erigeron canadensis HOM05D006477 ORTHO05D008311 6.4e-30 136.0 85 77.6
QL03p061357 Quercus lobata HOM05D006477 ORTHO05D008311 1.1e-29 135.2 88 79.5
Sabra05G0077900 Salix brachista HOM05D006477 ORTHO05D008311 1.4e-29 134.8 80 83.8
Ca_18942_v3 Cicer arietinum L. HOM05D006477 ORTHO05D008311 2.4e-29 134.0 87 74.7
HPP92_026480 Vanilla planifolia HOM05D006477 ORTHO05D008311 3.2e-29 133.7 84 76.2
TPR.G24136 Trifolium pratense HOM05D006477 ORTHO05D008311 1.2e-28 131.7 84 75.0
Aqoxy6G02884 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 3.5e-28 130.2 86 73.3
Lalb_Chr25g0285311 Lupinus albus HOM05D006477 ORTHO05D008311 3.5e-28 130.2 87 71.3
CsaV3_2G011040 Cucumis sativus L. HOM05D006477 ORTHO05D008311 4.6e-28 129.8 72 88.9
Aqoxy7G00965 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 5.9e-28 129.4 81 80.2
TPR.G19239 Trifolium pratense HOM05D006477 ORTHO05D008311 5.9e-28 129.4 84 72.6
Lj1g0022259 Lotus japonicus HOM05D006477 ORTHO05D008311 1.0e-27 128.6 87 70.1
SHI34920 Sapria himalayana HOM05D006477 ORTHO05D008311 1.0e-27 128.6 79 78.5
Medtr4g078485 Medicago truncatula HOM05D006477 ORTHO05D008311 1.3e-27 128.3 80 80.0
unitig_27.g24761 Utricularia gibba HOM05D006477 ORTHO05D008311 1.3e-27 128.3 83 75.9
Phvul.010G094300 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 2.3e-27 127.5 83 75.9
Phvul.011G119800 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 2.3e-27 127.5 81 77.8
Cpa.g.sc53.139 Carica papaya HOM05D006477 ORTHO05D008311 5.0e-27 126.3 81 77.8
Aqoxy5G03392 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 6.6e-27 125.9 81 79.0
Ciclev10023972m.g Citrus clementina HOM05D006477 ORTHO05D008311 8.6e-27 125.6 87 72.4
Glyma.12G115400 Glycine max HOM05D006477 ORTHO05D008311 1.1e-26 125.2 83 74.7
Glyma.06G291500 Glycine max HOM05D006477 ORTHO05D008311 1.5e-26 124.8 86 70.9
THA.LOC104823802 Tarenaya hassleriana HOM05D006477 ORTHO05D008311 7.3e-26 122.5 90 66.7
SEGI_06535 Sequoiadendron giganteum HOM05D006477 ORTHO05D008311 8.0e-25 119.0 84 71.4
Zm00001eb326860 Zea mays HOM05D006477 ORTHO05D008311 8.0e-25 119.0 83 71.1
AL2G19670 Arabidopsis lyrata HOM05D006477 ORTHO05D008311 1.0e-24 118.6 90 64.4
Carub.0002s1025 Capsella rubella HOM05D006477 ORTHO05D008311 1.0e-24 118.6 90 64.4
FAN10G2103 Fragaria x ananassa HOM05D002460 ORTHO05D002716 1.0e-24 118.6 74 75.7
Atru.chr3.3240 Acer truncatum HOM05D006477 ORTHO05D008311 1.8e-24 117.9 87 72.4
Os02g0695700 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 1.8e-24 117.9 83 69.9
PSO017G7014 Papaver somniferum HOM05D006477 ORTHO05D008311 2.3e-24 117.5 69 82.6
AT1G65032 Arabidopsis thaliana HOM05D006477 ORTHO05D008311 4.0e-24 116.7 90 63.3
Zm00001eb251360 Zea mays HOM05D006477 ORTHO05D008311 1.5e-23 114.8 83 67.5
Sp5g22520 Schrenkiella parvula HOM05D006477 ORTHO05D008311 3.4e-23 113.6 90 61.1
BcaNung05073 Brassica carinata HOM05D006477 ORTHO05D008311 5.8e-23 112.8 90 61.1
A07p34050 Brassica napus HOM05D006477 ORTHO05D008311 9.8e-23 112.1 90 58.9
C06p42740 Brassica napus HOM05D006477 ORTHO05D008311 9.8e-23 112.1 90 58.9
C06p42790 Brassica napus HOM05D006477 ORTHO05D008311 9.8e-23 112.1 90 58.9
BolC6t39165H Brassica oleracea HOM05D006477 ORTHO05D008311 9.8e-23 112.1 90 58.9
Thhalv10019379m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 1.3e-22 111.7 90 58.9
BraA07t31031Z Brassica rapa HOM05D006477 ORTHO05D008311 3.7e-22 110.2 90 57.8
C06p41870 Brassica napus HOM05D006477 ORTHO05D008311 8.3e-22 109.0 90 58.9
BolC6t39243H Brassica oleracea HOM05D006477 ORTHO05D008311 8.3e-22 109.0 90 58.9
Os04g0624900 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 2.0e-20 104.4 79 67.1
CSS0008051 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 2.7e-20 104.0 84 66.7
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 4.6e-20 103.2 63 81.0
DCAR_024347 Daucus carota HOM05D006477 ORTHO05D008311 6.0e-20 102.8 58 86.2
Mapoly0009s0212 Marchantia polymorpha HOM05D006477 ORTHO05D008311 1.3e-19 101.7 83 61.4
Pp3c3_2840 Physcomitrium patens HOM05D006477 ORTHO05D008311 2.3e-19 100.9 85 58.8
BcaC08g46243 Brassica carinata HOM05D006477 ORTHO05D008311 6.8e-16 89.4 90 52.2
Thhalv10019610m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 8.9e-16 89.0 77 58.4
Sed0027346 Sechium edule HOM05D006477 ORTHO05D008311 3.4e-15 87.0 49 83.7
BcaB03g15190 Brassica carinata HOM05D006477 ORTHO05D008311 9.8e-15 85.5 91 53.8
MBI16_g31701_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.4e-13 81.6 58 70.7
Psat7g168960 Pisum sativum HOM05D006477 ORTHO05D008311 4.1e-13 80.1 58 67.2
Rhsim13G0110700 Rhododendron simsii HOM05D006477 ORTHO05D008311 4.1e-13 80.1 46 89.1
SGA_v2.0_scaffold195G40833 Striga asiatica HOM05D006477 ORTHO05D404429 4.1e-13 80.1 58 70.7
RcHm_v2.0_Chr7g0192531 Rosa chinensis HOM05D002460 ORTHO05D002716 5.4e-13 79.7 58 70.7
Psat0s466g0120 Pisum sativum HOM05D006477 ORTHO05D008311 1.2e-12 78.6 58 65.5
Sc21g0001600 Simmondsia chinensis HOM05D006477 ORTHO05D008311 1.6e-12 78.2 46 82.6
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea HOM05D006477 ORTHO05D008311 6.0e-12 76.3 67 61.2
FvH4_5g06330 Fragaria vesca HOM05D002460 ORTHO05D002716 1.3e-11 75.1 67 68.7
FAN18G0198 Fragaria x ananassa HOM05D002460 ORTHO05D002716 1.3e-11 75.1 67 68.7
FAN04G0197 Fragaria x ananassa HOM05D002460 ORTHO05D002716 3.0e-11 73.9 67 68.7
FAN13G1072 Fragaria x ananassa HOM05D002460 ORTHO05D002716 3.9e-11 73.6 67 68.7
Haze_07591 Corylus avellana HOM05D002460 ORTHO05D002716 8.6e-11 72.4 126 38.1
FAN08G0993 Fragaria x ananassa HOM05D002460 ORTHO05D002716 3.3e-10 70.5 72 62.5
PSO017G6472 Papaver somniferum HOM05D006477 ORTHO05D008311 4.7e-09 66.6 46 67.4
PSO017G6604 Papaver somniferum HOM05D006477 ORTHO05D008311 4.7e-09 66.6 46 67.4
Actinidia24599 Actinidia chinensis HOM05D002460 ORTHO05D002716 6.2e-09 66.2 339 23.0
CiPaw.11G019300 Carya illinoinensis HOM05D002460 ORTHO05D002716 1.1e-08 65.5 57 59.6
COL.COLO4_36756 Corchorus olitorius HOM05D002460 ORTHO05D002716 1.1e-08 65.5 117 35.9
Rhsim12G0168100 Rhododendron simsii HOM05D002460 ORTHO05D002716 1.4e-08 65.1 126 36.5
MD14G1171100 Malus domestica HOM05D002460 ORTHO05D002716 1.8e-08 64.7 65 50.8
Duzib068G1032 Durio zibethinus HOM05D002460 ORTHO05D002716 3.1e-08 63.9 121 35.5
THA.LOC104798963 Tarenaya hassleriana HOM05D002460 ORTHO05D002716 5.2e-08 63.2 79 45.6
THA.LOC104821491 Tarenaya hassleriana HOM05D002460 ORTHO05D002716 5.2e-08 63.2 126 34.1
Prupe.5G165200 Prunus persica HOM05D002460 ORTHO05D002716 1.5e-07 61.6 53 66.0
Aa31LG4G16870 Aethionema arabicum HOM05D002460 ORTHO05D002716 2.0e-07 61.2 122 33.6
BcaB01g00827 Brassica carinata HOM05D002460 ORTHO05D002716 2.0e-07 61.2 224 29.0
Dinv20597 Davidia involucrata HOM05D002460 ORTHO05D002716 2.6e-07 60.8 64 51.6
PGR044G2570 Punica granatum HOM05D002460 ORTHO05D002716 3.4e-07 60.5 58 50.0
Cfa019223 Carpinus fangiana HOM05D002460 ORTHO05D002716 5.8e-07 59.7 43 69.8
Manes.06G110600 Manihot esculenta HOM05D002460 ORTHO05D002716 5.8e-07 59.7 43 69.8
Actinidia08966 Actinidia chinensis HOM05D002460 ORTHO05D002716 1.7e-06 58.2 129 33.3
TWI23G0764 Tripterygium wilfordii HOM05D002460 ORTHO05D002716 2.9e-06 57.4 64 48.4
TAR371G0019 Trochodendron aralioides HOM05D002460 ORTHO05D002716 2.9e-06 57.4 43 65.1
Ciclev10019266m.g Citrus clementina HOM05D002460 ORTHO05D002716 4.9e-06 56.6 43 67.4
CANSAT80G0235 Cannabis sativa HOM05D002460 ORTHO05D002716 6.4e-06 56.2 43 65.1
QL10p006862 Quercus lobata HOM05D002460 ORTHO05D002716 6.4e-06 56.2 58 55.2


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