Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 2.3e-128 462.2 236 100.0
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 2.3e-123 445.7 236 97.5
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 1.9e-122 442.6 236 96.6
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 2.2e-118 429.1 246 91.9
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 3.5e-116 421.8 236 92.4
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.0e-115 420.2 243 90.9
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 3.8e-110 401.7 235 87.2
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 1.4e-109 399.8 236 87.3
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 6.2e-97 357.8 234 84.6
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 2.0e-79 299.7 229 69.9
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 7.2e-77 291.2 229 65.9
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 3.6e-76 288.9 229 64.6
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 4.6e-76 288.5 229 65.1
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 3.0e-75 285.8 227 67.4
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 2.8e-73 279.3 229 65.9
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 9.1e-72 274.2 229 64.2
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 2.9e-70 269.2 229 64.2
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 2.1e-68 263.1 236 60.2
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 2.7e-68 262.7 229 61.1
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 6.1e-68 261.5 229 63.3
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 7.9e-68 261.2 229 59.8
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 5.1e-67 258.5 228 60.5
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 2.0e-66 256.5 230 60.9
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 1.4e-64 250.4 213 65.3
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 3.1e-64 249.2 228 58.3
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 9.1e-64 247.7 226 57.1
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 3.5e-63 245.7 229 59.0
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 6.5e-62 241.5 228 57.5
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 6.5e-62 241.5 230 58.7
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 8.5e-62 241.1 229 56.8
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 1.1e-61 240.7 228 56.1
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 1.9e-61 240.0 229 57.2
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 3.2e-61 239.2 228 56.6
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 7.2e-61 238.0 229 57.6
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 2.7e-60 236.1 229 57.2
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 3.6e-60 235.7 228 54.4
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 2.3e-59 233.0 226 57.5
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 3.0e-59 232.6 236 55.5
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 4.0e-59 232.3 229 55.5
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 1.5e-58 230.3 228 56.1
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 2.0e-58 229.9 232 56.0
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 2.6e-58 229.6 241 55.6
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 9.7e-58 227.6 235 54.0
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 1.7e-57 226.9 235 53.6
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 6.3e-57 224.9 229 55.0
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 6.3e-57 224.9 229 55.0
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 7.0e-56 221.5 228 53.1
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 9.1e-56 221.1 229 52.0
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 9.1e-56 221.1 228 54.4
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 1.6e-55 220.3 228 54.4
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 2.0e-55 219.9 225 56.9
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 2.0e-55 219.9 227 53.7
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 3.5e-55 219.2 228 53.9
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 4.5e-55 218.8 228 53.9
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 5.9e-55 218.4 230 55.7
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 7.7e-55 218.0 228 53.9
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 1.3e-54 217.2 226 55.8
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 1.7e-54 216.9 228 51.3
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 1.7e-54 216.9 230 55.2
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 1.7e-54 216.9 229 54.6
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 2.9e-54 216.1 228 53.1
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 2.9e-54 216.1 228 52.2
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 3.8e-54 215.7 229 54.1
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 5.0e-54 215.3 228 55.7
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 5.0e-54 215.3 229 54.1
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 6.5e-54 214.9 228 52.2
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 3.2e-53 212.6 213 59.6
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 5.5e-53 211.8 253 51.0
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 9.4e-53 211.1 229 52.0
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 1.2e-52 210.7 241 52.3
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 1.6e-52 210.3 229 52.0
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 1.6e-52 210.3 228 52.2
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 2.1e-52 209.9 250 51.6
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 3.6e-52 209.1 223 51.1
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 4.7e-52 208.8 203 57.6
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 1.0e-51 207.6 226 54.0
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 2.3e-51 206.5 178 61.2
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 4.0e-51 205.7 234 50.9
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 2.6e-50 203.0 179 62.0
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 4.8e-49 198.7 229 48.0
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 2.7e-47 193.0 241 49.8
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 1.0e-46 191.0 149 62.4
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 2.2e-46 189.9 227 47.6
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 1.1e-45 187.6 154 65.6
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 3.2e-45 186.0 227 47.1
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 7.2e-45 184.9 199 55.3
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 2.1e-44 183.3 223 46.2
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 1.0e-43 181.0 235 48.1
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 1.5e-42 177.2 205 48.3
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 2.6e-42 176.4 204 52.5
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 4.4e-42 175.6 225 46.2
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 2.2e-41 173.3 226 46.9
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 1.8e-40 170.2 224 48.7
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 1.0e-38 164.5 311 39.9
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 1.2e-36 157.5 229 43.7
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 1.6e-36 157.1 197 50.3
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 2.1e-36 156.8 257 44.0
GSVIVG01003191001 Vitis vinifera HOM05D006082 ORTHO05D007616 8.0e-36 154.8 132 66.7
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 2.2e-33 146.7 179 48.0
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 3.7e-33 146.0 207 42.5
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 1.1e-32 144.4 199 43.2
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 4.1e-32 142.5 312 35.3
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 5.4e-32 142.1 173 46.2
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 6.6e-30 135.2 304 35.2
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 1.5e-29 134.0 210 42.4
Hma1.2p1_0451F.1_g155800 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 8.0e-28 128.3 123 61.8
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 6.8e-27 125.2 285 35.4
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 9.8e-26 121.3 94 58.5
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 1.7e-25 120.6 143 45.5
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 3.7e-25 119.4 232 39.2
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 4.9e-25 119.0 226 35.0
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 7.0e-24 115.2 239 33.1
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 2.7e-23 113.2 219 35.6
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 1.0e-22 111.3 226 33.6
MD07G1162600 Malus domestica HOM05D006082 ORTHO05D007616 3.9e-22 109.4 65 87.7
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 1.1e-21 107.8 81 61.7
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 5.6e-21 105.5 79 62.0
Sed0024729 Sechium edule HOM05D006082 ORTHO05D007616 1.6e-20 104.0 124 54.8
arahy.Tifrunner.gnm1.ann1.PGF6M0 Arachis hypogaea HOM05D006082 ORTHO05D007616 1.1e-19 101.3 244 32.4
GSVIVG01003186001 Vitis vinifera HOM05D006082 ORTHO05D007616 4.0e-19 99.4 73 78.1
QL03p043604 Quercus lobata HOM05D006082 ORTHO05D007616 3.4e-18 96.3 201 38.3
RcHm_v2.0_Chr1g0361671 Rosa chinensis HOM05D006082 ORTHO05D007616 2.7e-15 86.7 114 52.6
C05p00940 Brassica napus HOM05D006082 ORTHO05D007616 2.3e-14 83.6 106 49.1
BcaC05g24597 Brassica carinata HOM05D006082 ORTHO05D007616 2.5e-13 80.1 202 30.7
RcHm_v2.0_Chr1g0361451 Rosa chinensis HOM05D006082 ORTHO05D007616 1.8e-11 73.9 37 94.6
RcHm_v2.0_Chr1g0333691 Rosa chinensis HOM05D006082 ORTHO05D007616 1.4e-08 64.3 34 91.2
SMO230G0051 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 5.4e-08 62.4 173 31.2


User provided reference genes

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