Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G1462 Fragaria x ananassa HOM05D005318 ORTHO05D006791 7.8e-230 800.0 389 100.0
FvH4_1g29260 Fragaria vesca HOM05D005318 ORTHO05D006791 3.5e-161 572.0 313 90.1
FAN23G1756 Fragaria x ananassa HOM05D005318 ORTHO05D006791 1.7e-160 569.7 313 89.5
FAN19G2285 Fragaria x ananassa HOM05D005318 ORTHO05D006791 1.9e-159 566.2 313 89.5
FAN26G2899 Fragaria x ananassa HOM05D005318 ORTHO05D006791 3.2e-159 565.5 313 89.1
RcHm_v2.0_Chr3g0494731 Rosa chinensis HOM05D005318 ORTHO05D006791 1.6e-153 546.6 313 85.6
Prupe.7G019400 Prunus persica HOM05D005318 ORTHO05D006791 7.0e-146 521.2 313 80.2
MD00G1025200 Malus domestica HOM05D005318 ORTHO05D006791 2.3e-144 516.2 314 80.6
QL07p013739 Quercus lobata HOM05D005318 ORTHO05D006791 8.9e-141 504.2 314 79.3
CsaV3_4G029230 Cucumis sativus L. HOM05D005318 ORTHO05D006791 1.3e-136 490.3 314 75.2
Potri.016G028900 Populus trichocarpa HOM05D005318 ORTHO05D006791 3.6e-134 482.3 307 78.2
Thecc.05G118400 Theobroma cacao HOM05D005318 ORTHO05D006791 1.1e-133 480.7 315 74.3
Atru.chr1.1378 Acer truncatum HOM05D005318 ORTHO05D006791 1.8e-133 479.9 316 73.4
Sc19g0007930 Simmondsia chinensis HOM05D005318 ORTHO05D006791 1.8e-133 479.9 320 73.4
COL.COLO4_33519 Corchorus olitorius HOM05D005318 ORTHO05D006791 3.1e-133 479.2 316 73.7
Actinidia37854 Actinidia chinensis HOM05D005318 ORTHO05D006791 5.2e-133 478.4 312 75.6
Duzib128G1115 Durio zibethinus HOM05D005318 ORTHO05D006791 6.8e-133 478.0 315 73.7
Migut.K00161 Erythranthe guttata HOM05D005318 ORTHO05D006791 1.2e-132 477.2 320 70.9
Manes.08G162200 Manihot esculenta HOM05D005318 ORTHO05D006791 1.2e-132 477.2 342 70.8
Sabra16G0033000 Salix brachista HOM05D005318 ORTHO05D006791 2.0e-132 476.5 326 73.0
Potri.006G031700 Populus trichocarpa HOM05D005318 ORTHO05D006791 1.3e-131 473.8 312 73.7
Sabra06G0021100 Salix brachista HOM05D005318 ORTHO05D006791 3.7e-131 472.2 327 71.9
Gorai.010G128900 Gossypium raimondii HOM05D005318 ORTHO05D006791 4.9e-131 471.9 315 73.0
CSS0014915 Camellia sinensis var. sinensis HOM05D005318 ORTHO05D006791 6.4e-131 471.5 314 73.9
Gohir.D06G113100 Gossypium hirsutum HOM05D005318 ORTHO05D006791 1.4e-130 470.3 315 72.7
vmacro07764 Vaccinium macrocarpon HOM05D005318 ORTHO05D006791 1.4e-130 470.3 303 76.6
Glyma.03G121100 Glycine max HOM05D005318 ORTHO05D006791 9.2e-130 467.6 312 73.4
Glyma.19G125800 Glycine max HOM05D005318 ORTHO05D006791 1.2e-129 467.2 330 70.6
Lj1g0025305 Lotus japonicus HOM05D005318 ORTHO05D006791 1.2e-129 467.2 303 75.6
Hund24536 Selenicereus undatus HOM05D005318 ORTHO05D006791 1.6e-129 466.8 319 71.5
Gohir.A06G109000 Gossypium hirsutum HOM05D005318 ORTHO05D006791 2.1e-129 466.5 315 72.7
arahy.Tifrunner.gnm1.ann1.HZCB2X Arachis hypogaea HOM05D005318 ORTHO05D006791 3.5e-129 465.7 300 76.0
arahy.Tifrunner.gnm1.ann1.PFNU0X Arachis hypogaea HOM05D005318 ORTHO05D006791 3.5e-129 465.7 300 76.0
RhsimUnG0019600 Rhododendron simsii HOM05D005318 ORTHO05D006791 3.5e-129 465.7 303 75.9
HanXRQChr06g0177301 Helianthus annuus HOM05D005318 ORTHO05D006791 4.6e-129 465.3 308 70.8
Medtr7g088740 Medicago truncatula HOM05D005318 ORTHO05D006791 4.6e-129 465.3 328 71.3
BraA05t19191Z Brassica rapa HOM05D005318 ORTHO05D006791 6.0e-129 464.9 300 72.7
A05p01930 Brassica napus HOM05D005318 ORTHO05D006791 7.8e-129 464.5 300 72.7
MBI19_g45589_MAGBIO Magnolia biondii HOM05D005318 ORTHO05D006791 1.3e-128 463.8 309 73.1
TAR633G2118 Trochodendron aralioides HOM05D005318 ORTHO05D006791 1.3e-128 463.8 328 71.3
BolC4t21874H Brassica oleracea HOM05D005318 ORTHO05D006791 2.3e-128 463.0 300 72.3
Phvul.001G117700 Phaseolus vulgaris HOM05D005318 ORTHO05D006791 2.3e-128 463.0 313 72.8
C04p02280 Brassica napus HOM05D005318 ORTHO05D006791 3.9e-128 462.2 300 72.0
ECA236G3220 Erigeron canadensis HOM05D005318 ORTHO05D006791 3.9e-128 462.2 302 73.2
Thhalv10016195m.g Eutrema salsugineum HOM05D005318 ORTHO05D006791 3.9e-128 462.2 297 74.4
Os07g0662900 Oryza sativa ssp. japonica HOM05D005318 ORTHO05D006791 3.9e-128 462.2 316 70.9
Aqoxy1G00050 Aquilegia oxysepala HOM05D005318 ORTHO05D006791 5.1e-128 461.8 295 75.6
Aa31LG3G1260 Aethionema arabicum HOM05D005318 ORTHO05D006791 6.6e-128 461.5 296 75.7
DCAR_013530 Daucus carota HOM05D005318 ORTHO05D006791 8.6e-128 461.1 300 74.3
THA.LOC104803226 Tarenaya hassleriana HOM05D005318 ORTHO05D006791 8.6e-128 461.1 303 73.9
unitig_736.g22282 Utricularia gibba HOM05D005318 ORTHO05D006791 1.5e-127 460.3 295 73.2
Cfa019951 Carpinus fangiana HOM05D005318 ORTHO05D006791 2.5e-127 459.5 307 73.0
Ca_08698_v3 Cicer arietinum L. HOM05D005318 ORTHO05D006791 2.5e-127 459.5 328 70.7
Carub.0004s2316 Capsella rubella HOM05D005318 ORTHO05D006791 3.3e-127 459.1 297 73.1
Eucgr.K01679 Eucalyptus grandis HOM05D005318 ORTHO05D006791 3.3e-127 459.1 294 73.8
CARHR135960 Cardamine hirsuta HOM05D005318 ORTHO05D006791 5.6e-127 458.4 295 73.9
Nitab4.5_0001388g0020 Nicotiana tabacum HOM05D005318 ORTHO05D006791 5.6e-127 458.4 299 72.6
TWI74G0513 Tripterygium wilfordii HOM05D005318 ORTHO05D006791 7.3e-127 458.0 315 72.1
Peaxi162Scf01017g00016 Petunia axillaris HOM05D005318 ORTHO05D006791 1.6e-126 456.8 330 69.4
PGR142G3097 Punica granatum HOM05D005318 ORTHO05D006791 1.6e-126 456.8 308 71.1
Sopen02g004490 Solanum pennellii HOM05D005318 ORTHO05D006791 2.8e-126 456.1 297 72.1
CiPaw.09G051900 Carya illinoinensis HOM05D005318 ORTHO05D006791 3.6e-126 455.7 321 70.4
Psat0s698g0160 Pisum sativum HOM05D005318 ORTHO05D006791 4.7e-126 455.3 300 73.7
CANSAT64G0498 Cannabis sativa HOM05D005318 ORTHO05D006791 6.2e-126 454.9 313 70.3
Lsat_1_v5_gn_8_83900 Lactuca sativa HOM05D005318 ORTHO05D006791 8.1e-126 454.5 307 70.4
Cc06_g21270 Coffea canephora HOM05D005318 ORTHO05D006791 1.4e-125 453.8 302 72.2
Sp4g23170 Schrenkiella parvula HOM05D005318 ORTHO05D006791 1.4e-125 453.8 323 69.0
Oeu064748.1 Olea europaea HOM05D005318 ORTHO05D006791 2.3e-125 453.0 295 74.2
Ciclev10010989m.g Citrus clementina HOM05D005318 ORTHO05D006791 4.0e-125 452.2 304 72.7
Solyc02g020980.4 Solanum lycopersicum HOM05D005318 ORTHO05D006791 4.0e-125 452.2 297 72.1
Dinv26400 Davidia involucrata HOM05D005318 ORTHO05D006791 5.2e-125 451.8 295 75.6
Lj2A411T33 Lonicera japonica HOM05D005318 ORTHO05D006791 2.0e-124 449.9 325 68.0
GSVIVG01025810001 Vitis vinifera HOM05D005318 ORTHO05D006791 2.0e-124 449.9 306 72.9
Nitab4.5_0000092g0020 Nicotiana tabacum HOM05D005318 ORTHO05D006791 2.6e-124 449.5 296 72.3
AL4G38790 Arabidopsis lyrata HOM05D005318 ORTHO05D006791 7.6e-124 448.0 304 70.7
HPP92_014255 Vanilla planifolia HOM05D005318 ORTHO05D006791 7.6e-124 448.0 317 68.8
ClCG04G005890 Citrullus lanatus HOM05D005318 ORTHO05D006791 1.7e-123 446.8 275 77.5
Lalb_Chr14g0365451 Lupinus albus HOM05D005318 ORTHO05D006791 1.7e-123 446.8 340 65.9
AUR62018414 Chenopodium quinoa HOM05D005318 ORTHO05D006791 2.9e-123 446.0 304 70.7
Ah.04g150540 Amaranthus hybridus HOM05D005318 ORTHO05D006791 3.7e-123 445.7 314 70.1
AT2G40840 Arabidopsis thaliana HOM05D005318 ORTHO05D006791 3.7e-123 445.7 295 71.5
FAN28G1591 Fragaria x ananassa HOM05D005318 ORTHO05D006791 4.9e-123 445.3 237 90.7
AUR62021029 Chenopodium quinoa HOM05D005318 ORTHO05D006791 2.1e-121 439.9 300 71.0
EL10Ac3g07301 Beta vulgaris HOM05D005318 ORTHO05D006791 6.0e-121 438.3 333 66.7
Oeu064749.1 Olea europaea HOM05D005318 ORTHO05D006791 1.0e-120 437.6 323 67.5
ATR0782G050 Amborella trichopoda HOM05D005318 ORTHO05D006791 6.6e-120 434.9 295 70.8
Cpa.g.sc92.60 Carica papaya HOM05D005318 ORTHO05D006791 1.5e-119 433.7 269 78.1
CDE08G1108 Ceratophyllum demersum HOM05D005318 ORTHO05D006791 2.1e-118 429.9 330 64.8
Sopen02g004780 Solanum pennellii HOM05D005318 ORTHO05D006791 1.2e-116 424.1 270 72.2
PSO384G1877 Papaver somniferum HOM05D005318 ORTHO05D006791 2.4e-114 416.4 345 62.3
PSO339G3620 Papaver somniferum HOM05D005318 ORTHO05D006791 1.7e-112 410.2 330 63.3
BcaC02g12738 Brassica carinata HOM05D005318 ORTHO05D006791 6.6e-112 408.3 299 66.9
Mapoly0011s0190 Marchantia polymorpha HOM05D005318 ORTHO05D006791 1.4e-106 390.6 334 57.5
SGA_v2.0_scaffold240G44129 Striga asiatica HOM05D005318 ORTHO05D006791 5.4e-106 388.7 305 65.2
Sed0003650 Sechium edule HOM05D005318 ORTHO05D006791 5.1e-104 382.1 234 77.4
SMO203G0025 Selaginella moellendorffii HOM05D005318 ORTHO05D006791 1.1e-101 374.4 291 59.5
AagrBONN_evm.TU.Sc2ySwM_344.1228 Anthoceros agrestis HOM05D005318 ORTHO05D006791 4.0e-101 372.5 294 58.5
Pp3c15_25660 Physcomitrium patens HOM05D005318 ORTHO05D006791 6.9e-101 371.7 300 58.3
CAN.G39.12 Capsicum annuum HOM05D005318 ORTHO05D006791 5.1e-96 355.5 232 72.4
SMO327G0045 Selaginella moellendorffii HOM05D005318 ORTHO05D006791 2.5e-95 353.2 263 61.2
CBR_g6687 Chara braunii HOM05D005318 ORTHO05D006791 4.3e-87 325.9 295 53.6
MCO02G281 Micromonas commoda HOM05D005318 ORTHO05D006791 2.5e-71 273.5 295 47.8
PRCOL_00001049 Prasinoderma coloniale HOM05D005318 ORTHO05D006791 1.3e-70 271.2 267 47.2
MELO3C019135.2 Cucumis melo HOM05D005318 ORTHO05D006791 6.3e-70 268.9 166 78.9
Cre02.g095126 Chlamydomonas reinhardtii HOM05D005318 ORTHO05D006791 3.1e-69 266.5 283 45.2
Haze_20288 Corylus avellana HOM05D005318 ORTHO05D006791 1.3e-67 261.2 167 77.8
TPR.G23186 Trifolium pratense HOM05D005318 ORTHO05D006791 2.5e-66 256.9 171 74.9
TPR.G36183 Trifolium pratense HOM05D005318 ORTHO05D006791 8.2e-54 215.3 151 67.5
Zm00001eb197360 Zea mays HOM05D005318 ORTHO05D006791 1.3e-51 208.0 116 80.2
Oeu060769.1 Olea europaea HOM05D005318 ORTHO05D006791 7.5e-47 192.2 169 61.5
Hund19067 Selenicereus undatus HOM05D005318 ORTHO05D006791 7.5e-31 139.0 86 74.4
Zm00001eb329980 Zea mays HOM05D005318 ORTHO05D006791 2.5e-18 97.4 75 64.0
C07p47440 Brassica napus HOM05D005318 ORTHO05D032321 1.2e-09 68.6 60 60.0
BolC7t45271H Brassica oleracea HOM05D005318 ORTHO05D032321 1.2e-09 68.6 60 60.0


User provided reference genes

Program Settings