Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G1027 Fragaria x ananassa HOM05D008019 ORTHO05D010184 5.3e-86 320.9 147 100.0
FvH4_7g00910 Fragaria vesca HOM05D008019 ORTHO05D010184 9.9e-85 316.6 147 98.6
FAN01G0739 Fragaria x ananassa HOM05D008019 ORTHO05D010184 3.9e-81 304.7 147 95.9
FAN10G3815 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.5e-80 302.8 145 95.9
RcHm_v2.0_Chr1g0315801 Rosa chinensis HOM05D008019 ORTHO05D010184 1.5e-72 276.2 147 88.4
Prupe.2G012100 Prunus persica HOM05D008019 ORTHO05D010184 7.4e-64 247.3 147 81.0
MD02G1313500 Malus domestica HOM05D008019 ORTHO05D010184 5.3e-62 241.1 148 76.4
PGR044G0644 Punica granatum HOM05D008019 ORTHO05D010184 1.4e-57 226.5 149 72.5
TAR623G0854 Trochodendron aralioides HOM05D008019 ORTHO05D010184 7.4e-56 220.7 147 73.5
Cfa010760 Carpinus fangiana HOM05D008019 ORTHO05D010184 1.3e-55 219.9 136 76.5
Ciclev10033035m.g Citrus clementina HOM05D008019 ORTHO05D010184 1.3e-55 219.9 132 76.5
Potri.009G062400 Populus trichocarpa HOM05D008019 ORTHO05D010184 3.7e-55 218.4 147 72.1
Haze_03214 Corylus avellana HOM05D008019 ORTHO05D010184 4.8e-55 218.0 136 75.7
Potri.001G268000 Populus trichocarpa HOM05D008019 ORTHO05D010184 8.2e-55 217.2 147 71.4
QL04p007219 Quercus lobata HOM05D008019 ORTHO05D010184 8.2e-55 217.2 131 76.3
TWI09G1168 Tripterygium wilfordii HOM05D008019 ORTHO05D010184 1.4e-54 216.5 114 84.2
Nn2g15438 Nelumbo nucifera HOM05D008019 ORTHO05D010184 1.8e-54 216.1 147 69.4
TAR623G1004 Trochodendron aralioides HOM05D008019 ORTHO05D010184 2.4e-54 215.7 147 72.1
Manes.07G005100 Manihot esculenta HOM05D008019 ORTHO05D010184 1.5e-53 213.0 149 70.5
Thecc.01G411900 Theobroma cacao HOM05D008019 ORTHO05D010184 1.5e-53 213.0 147 66.7
Glyma.12G238000 Glycine max HOM05D008019 ORTHO05D010184 7.7e-53 210.7 148 65.5
Dinv43452 Davidia involucrata HOM05D008019 ORTHO05D010184 1.0e-52 210.3 143 71.3
GSVIVG01032075001 Vitis vinifera HOM05D008019 ORTHO05D010184 1.3e-52 209.9 107 86.0
Oeu010780.1 Olea europaea HOM05D008019 ORTHO05D010184 2.9e-52 208.8 124 75.8
Actinidia31058 Actinidia chinensis HOM05D008019 ORTHO05D010184 1.1e-51 206.8 115 80.0
CSS0044570 Camellia sinensis var. sinensis HOM05D008019 ORTHO05D010184 1.9e-51 206.1 148 66.9
Cc02_g27810 Coffea canephora HOM05D008019 ORTHO05D010184 3.2e-51 205.3 106 83.0
Rhsim07G0054900 Rhododendron simsii HOM05D008019 ORTHO05D010184 3.2e-51 205.3 148 65.5
VMungo1127G0775 Vigna mungo HOM05D008019 ORTHO05D010184 7.2e-51 204.1 146 64.4
CANSAT80G0909 Cannabis sativa HOM05D008019 ORTHO05D010184 1.6e-50 203.0 140 70.0
COL.COLO4_23925 Corchorus olitorius HOM05D008019 ORTHO05D010184 3.6e-50 201.8 117 76.9
MELO3C023543.2 Cucumis melo HOM05D008019 ORTHO05D010184 4.7e-50 201.4 148 62.8
Eucgr.J01265 Eucalyptus grandis HOM05D008019 ORTHO05D010184 4.7e-50 201.4 153 61.4
Phvul.011G212700 Phaseolus vulgaris HOM05D008019 ORTHO05D010184 4.7e-50 201.4 146 63.7
CsaV3_7G031160 Cucumis sativus L. HOM05D008019 ORTHO05D010184 6.1e-50 201.1 148 63.5
Gohir.A12G094001 Gossypium hirsutum HOM05D008019 ORTHO05D010184 1.8e-49 199.5 154 64.3
MBI04_g13624_MAGBIO Magnolia biondii HOM05D008019 ORTHO05D010184 2.3e-49 199.1 132 67.4
MSTRG.17046 Avicennia marina HOM05D008019 ORTHO05D010184 3.0e-49 198.7 109 78.9
SGA_v2.0_scaffold167G38441 Striga asiatica HOM05D008019 ORTHO05D010184 3.9e-49 198.4 106 81.1
CAN.G1155.15 Capsicum annuum HOM05D008019 ORTHO05D010184 5.1e-49 198.0 106 79.2
Duzib138G0215 Durio zibethinus HOM05D008019 ORTHO05D010184 6.7e-49 197.6 151 64.2
ECA248G1827 Erigeron canadensis HOM05D008019 ORTHO05D010184 8.8e-49 197.2 109 78.0
HanXRQChr01g0016161 Helianthus annuus HOM05D008019 ORTHO05D010184 1.1e-48 196.8 109 78.9
Lj3g0025736 Lotus japonicus HOM05D008019 ORTHO05D010184 1.1e-48 196.8 150 61.3
Lj9A631G50 Lonicera japonica HOM05D008019 ORTHO05D010184 1.5e-48 196.4 106 80.2
arahy.Tifrunner.gnm1.ann1.SF3C2I Arachis hypogaea HOM05D008019 ORTHO05D010184 2.0e-48 196.1 111 75.7
arahy.Tifrunner.gnm1.ann1.V37GBM Arachis hypogaea HOM05D008019 ORTHO05D010184 2.0e-48 196.1 111 75.7
ClCG09G004230 Citrullus lanatus HOM05D008019 ORTHO05D010184 3.3e-48 195.3 133 64.7
FAN03G3138 Fragaria x ananassa HOM05D008019 ORTHO05D010184 4.4e-48 194.9 101 85.1
Aqoxy7G00800 Aquilegia oxysepala HOM05D008019 ORTHO05D010184 5.7e-48 194.5 147 63.3
Gorai.008G105200 Gossypium raimondii HOM05D008019 ORTHO05D010184 7.4e-48 194.1 160 60.0
TPR.G1886 Trifolium pratense HOM05D008019 ORTHO05D010184 7.4e-48 194.1 153 61.4
CDE05G1162 Ceratophyllum demersum HOM05D008019 ORTHO05D010184 1.3e-47 193.4 106 78.3
SalBow5G2002 Salvia bowleyana HOM05D008019 ORTHO05D010184 1.1e-46 190.3 109 76.1
unitig_750.g28450 Utricularia gibba HOM05D008019 ORTHO05D010184 5.3e-46 188.0 106 75.5
Os09g0485800 Oryza sativa ssp. japonica HOM05D008019 ORTHO05D010184 9.1e-46 187.2 106 76.4
THA.LOC104819690 Tarenaya hassleriana HOM05D008019 ORTHO05D010184 1.2e-45 186.8 141 63.8
Lsat_1_v5_gn_1_107820 Lactuca sativa HOM05D008019 ORTHO05D010184 1.7e-44 183.0 111 73.0
Sabra09G0046100 Salix brachista HOM05D000752 ORTHO05D000572 1.7e-44 183.0 92 85.9
vmacro13657 Vaccinium macrocarpon HOM05D008019 ORTHO05D010184 8.5e-44 180.6 176 54.0
SEGI_23902 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 8.0e-42 174.1 105 69.5
Migut.B01317 Erythranthe guttata HOM05D008019 ORTHO05D010184 4.8e-39 164.9 89 80.9
Sed0006336 Sechium edule HOM05D008019 ORTHO05D010184 6.3e-39 164.5 147 53.7
Pp3c14_7420 Physcomitrium patens HOM05D008019 ORTHO05D010184 1.1e-38 163.7 105 67.6
Hund19732 Selenicereus undatus HOM05D008019 ORTHO05D010184 1.7e-36 156.4 80 82.5
ATR0605G214 Amborella trichopoda HOM05D008019 ORTHO05D010184 7.2e-35 151.0 97 66.0
Lalb_Chr19g0132131 Lupinus albus HOM05D008019 ORTHO05D010184 4.7e-34 148.3 77 79.2
Sc10g0000030 Simmondsia chinensis HOM05D008019 ORTHO05D010184 4.4e-32 141.7 98 66.3
Zm00001eb101800 Zea mays HOM05D008019 ORTHO05D010184 5.0e-28 128.3 81 66.7
Zm00001eb101810 Zea mays HOM05D008019 ORTHO05D010184 6.5e-28 127.9 81 66.7
Gohir.D12G096933 Gossypium hirsutum HOM05D008019 ORTHO05D010184 1.3e-20 103.6 104 54.8
SEGI_33125 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 8.9e-17 90.9 58 62.1
Lalb_Chr19g0132141 Lupinus albus HOM05D008019 ORTHO05D010184 2.9e-07 59.3 37 67.6
Medtr8g036830 Medicago truncatula HOM05D008019 ORTHO05D010184 3.7e-07 58.9 40 60.0
SEGI_37443 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 3.2e-06 55.8 32 65.6


User provided reference genes

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