Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 7.5e-217 756.9 385 100.0
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 9.9e-201 703.4 406 89.7
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 7.8e-198 693.7 385 93.8
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 1.1e-194 683.3 389 92.0
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 2.0e-193 679.1 389 89.7
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 8.4e-184 647.1 385 88.6
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 9.3e-175 617.1 385 86.0
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 1.9e-172 609.4 389 79.7
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 1.4e-167 593.2 383 79.6
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 4.5e-161 571.6 390 75.6
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 7.2e-159 564.3 388 74.2
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 2.5e-156 555.8 389 73.0
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 9.7e-156 553.9 389 72.5
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 1.1e-154 550.4 393 70.7
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.6e-153 545.8 391 70.8
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 4.5e-153 545.0 389 71.0
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 4.5e-153 545.0 389 71.5
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 5.9e-153 544.7 385 72.5
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 5.9e-153 544.7 393 70.5
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 5.0e-152 541.6 389 70.2
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 6.5e-152 541.2 388 70.4
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 6.5e-152 541.2 390 69.7
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 6.5e-152 541.2 334 82.6
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 8.5e-152 540.8 389 70.2
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 8.5e-152 540.8 390 69.2
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 1.9e-151 539.7 387 71.1
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 3.2e-151 538.9 389 69.9
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 7.2e-151 537.7 389 71.0
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 1.2e-150 537.0 409 66.7
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 1.2e-150 537.0 389 70.7
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 1.6e-150 536.6 389 69.7
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 1.6e-150 536.6 389 71.0
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 2.1e-150 536.2 390 69.2
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 3.0e-149 532.3 383 70.5
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 3.9e-149 531.9 389 70.7
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 6.7e-149 531.2 399 70.7
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 4.4e-148 528.5 389 68.1
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 5.7e-148 528.1 390 69.2
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 9.7e-148 527.3 442 62.9
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 2.2e-147 526.2 390 69.2
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 2.2e-147 526.2 390 68.7
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 1.1e-146 523.9 388 68.3
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 2.4e-146 522.7 417 66.2
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 2.4e-146 522.7 389 68.4
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 5.3e-146 521.5 396 68.7
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 6.9e-146 521.2 390 68.7
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 2.0e-145 519.6 389 67.4
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 7.7e-145 517.7 444 62.6
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 1.3e-144 516.9 413 64.2
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 1.3e-144 516.9 389 66.6
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 1.3e-144 516.9 389 66.6
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 1.3e-144 516.9 386 66.8
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 2.2e-144 516.2 389 66.3
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 2.9e-144 515.8 389 68.4
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 2.9e-144 515.8 389 66.3
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 1.9e-143 513.1 390 67.7
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 2.5e-143 512.7 390 67.7
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 3.2e-143 512.3 419 63.2
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 3.2e-143 512.3 442 62.0
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 5.5e-143 511.5 389 67.9
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 7.2e-143 511.1 387 67.2
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 2.7e-142 509.2 385 66.5
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 3.6e-142 508.8 389 67.4
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 6.1e-142 508.1 389 66.6
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 1.4e-141 506.9 372 69.4
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 8.8e-141 504.2 389 66.3
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 8.8e-141 504.2 389 66.3
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 1.1e-140 503.8 391 65.0
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 2.0e-140 503.1 393 65.4
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 2.6e-140 502.7 389 66.1
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 3.3e-140 502.3 414 63.0
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 9.7e-140 500.7 387 65.9
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 1.7e-139 500.0 389 66.3
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 2.8e-139 499.2 389 64.8
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 3.7e-139 498.8 390 64.1
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 6.3e-139 498.0 389 66.1
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 4.1e-138 495.4 389 66.6
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 4.1e-138 495.4 389 66.6
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 7.0e-138 494.6 385 64.4
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 9.1e-138 494.2 385 65.5
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 2.6e-137 492.7 392 63.8
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 3.5e-137 492.3 392 64.0
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 3.5e-137 492.3 366 69.9
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 7.7e-137 491.1 389 65.0
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 7.7e-137 491.1 389 65.6
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 3.8e-136 488.8 389 65.3
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 6.5e-136 488.0 390 64.4
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 1.9e-135 486.5 389 64.8
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 1.9e-135 486.5 389 64.8
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 1.9e-135 486.5 392 63.0
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 2.5e-135 486.1 465 55.1
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 4.0e-133 478.8 396 63.6
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 3.7e-131 472.2 407 60.9
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 3.7e-131 472.2 398 62.1
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 4.5e-121 438.7 390 59.7
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 1.0e-120 437.6 329 66.0
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.9e-120 436.0 389 57.8
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 2.5e-119 433.0 392 57.7
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 2.5e-119 433.0 388 58.2
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 8.8e-117 424.5 395 57.2
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 1.1e-114 417.5 271 77.5
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 3.5e-113 412.5 426 54.2
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 4.0e-109 399.1 273 73.3
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 2.6e-108 396.4 399 54.6
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 4.7e-102 375.6 401 53.4
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 1.4e-77 294.3 245 60.8
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 4.3e-63 246.1 422 38.2
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.6e-62 244.2 158 75.3
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 4.0e-61 239.6 158 74.7
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 4.5e-60 236.1 158 73.4
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 2.9e-59 233.4 462 34.0
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.5e-50 203.8 158 65.2
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 3.0e-48 196.8 148 66.2
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 8.7e-48 195.3 352 37.5
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 3.2e-42 176.8 137 60.6
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.4e-37 161.4 111 65.8
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 7.7e-36 155.6 113 64.6
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 5.1e-32 142.9 112 59.8
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 8.8e-32 142.1 124 60.5
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 2.5e-26 124.0 86 70.9
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 4.2e-26 123.2 113 54.0
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.5e-23 114.8 95 61.1
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 1.6e-09 68.2 39 84.6
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 2.7e-09 67.4 124 37.1
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 3.6e-09 67.0 39 82.1
GSVIVG01032303001 Vitis vinifera HOM05D002866 ORTHO05D440048 7.5e-07 59.3 43 65.1


User provided reference genes

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